data_6SC3 # _model_server_result.job_id qCnSjLw2s17FcFS-ULo2NQ _model_server_result.datetime_utc '2025-01-10 21:10:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sc3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 6SC3 # _exptl.entry_id 6SC3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6SC3 _cell.length_a 92.76 _cell.length_b 92.76 _cell.length_c 129.004 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SC3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 57 E ASP 57 1_555 C CA CA . E CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc2 A OD2 ASP 57 E ASP 57 1_555 C CA CA . E CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc3 A OD1 ASP 59 E ASP 59 1_555 C CA CA . E CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc4 A O GLN 61 E GLN 61 1_555 C CA CA . E CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc5 A OD2 ASP 138 E ASP 138 1_555 B CA CA . E CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc6 A NE2 HIS 142 E HIS 142 1_555 F ZN ZN . E ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc7 A NE2 HIS 146 E HIS 146 1_555 F ZN ZN . E ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc8 A OE2 GLU 166 E GLU 166 1_555 F ZN ZN . E ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc9 A OE1 GLU 177 E GLU 177 1_555 B CA CA . E CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc10 A OE2 GLU 177 E GLU 177 1_555 B CA CA . E CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? metalc ? metalc11 A OE2 GLU 177 E GLU 177 1_555 E CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc12 A O ASN 183 E ASN 183 1_555 E CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc13 A OD1 ASP 185 E ASP 185 1_555 B CA CA . E CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc14 A OD2 ASP 185 E ASP 185 1_555 E CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc15 A O GLU 187 E GLU 187 1_555 B CA CA . E CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc16 A OE1 GLU 190 E GLU 190 1_555 B CA CA . E CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc17 A OE2 GLU 190 E GLU 190 1_555 B CA CA . E CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc18 A OE2 GLU 190 E GLU 190 1_555 E CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc19 A O TYR 193 E TYR 193 1_555 D CA CA . E CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc20 A O THR 194 E THR 194 1_555 D CA CA . E CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc21 A OG1 THR 194 E THR 194 1_555 D CA CA . E CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc22 A O ILE 197 E ILE 197 1_555 D CA CA . E CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc23 A OD1 ASP 200 E ASP 200 1_555 D CA CA . E CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc24 B CA CA . E CA 401 1_555 J O HOH . E HOH 570 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc25 C CA CA . E CA 402 1_555 J O HOH . E HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc26 C CA CA . E CA 402 1_555 J O HOH . E HOH 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc27 C CA CA . E CA 402 1_555 J O HOH . E HOH 655 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc28 D CA CA . E CA 403 1_555 J O HOH . E HOH 518 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc29 D CA CA . E CA 403 1_555 J O HOH . E HOH 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc30 E CA CA . E CA 404 1_555 J O HOH . E HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc31 E CA CA . E CA 404 1_555 J O HOH . E HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc32 F ZN ZN . E ZN 405 1_555 G O1 BCT . E BCT 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc33 F ZN ZN . E ZN 405 1_555 G O2 BCT . E BCT 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6SC3 _atom_sites.fract_transf_matrix[1][1] 0.010781 _atom_sites.fract_transf_matrix[1][2] 0.006224 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007752 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA E 1 401 1 CA CA . C 2 CA E 1 402 2 CA CA . D 2 CA E 1 403 3 CA CA . E 2 CA E 1 404 4 CA CA . F 3 ZN E 1 405 1 ZN ZN . G 4 BCT E 1 406 1 BCT BCT . H 5 0A9 E 1 407 1 0A9 XXX . I 6 DMS E 1 408 1 DMS DMS . J 7 HOH E 1 501 153 HOH HOH . J 7 HOH E 2 502 206 HOH HOH . J 7 HOH E 3 503 94 HOH HOH . J 7 HOH E 4 504 42 HOH HOH . J 7 HOH E 5 505 20 HOH HOH . J 7 HOH E 6 506 100 HOH HOH . J 7 HOH E 7 507 148 HOH HOH . J 7 HOH E 8 508 110 HOH HOH . J 7 HOH E 9 509 4 HOH HOH . J 7 HOH E 10 510 143 HOH HOH . J 7 HOH E 11 511 166 HOH HOH . J 7 HOH E 12 512 71 HOH HOH . J 7 HOH E 13 513 18 HOH HOH . J 7 HOH E 14 514 52 HOH HOH . J 7 HOH E 15 515 125 HOH HOH . J 7 HOH E 16 516 176 HOH HOH . J 7 HOH E 17 517 7 HOH HOH . J 7 HOH E 18 518 36 HOH HOH . J 7 HOH E 19 519 152 HOH HOH . J 7 HOH E 20 520 127 HOH HOH . J 7 HOH E 21 521 39 HOH HOH . J 7 HOH E 22 522 60 HOH HOH . J 7 HOH E 23 523 8 HOH HOH . J 7 HOH E 24 524 123 HOH HOH . J 7 HOH E 25 525 77 HOH HOH . J 7 HOH E 26 526 11 HOH HOH . J 7 HOH E 27 527 78 HOH HOH . J 7 HOH E 28 528 201 HOH HOH . J 7 HOH E 29 529 167 HOH HOH . J 7 HOH E 30 530 96 HOH HOH . J 7 HOH E 31 531 63 HOH HOH . J 7 HOH E 32 532 173 HOH HOH . J 7 HOH E 33 533 129 HOH HOH . J 7 HOH E 34 534 59 HOH HOH . J 7 HOH E 35 535 30 HOH HOH . J 7 HOH E 36 536 19 HOH HOH . J 7 HOH E 37 537 122 HOH HOH . J 7 HOH E 38 538 49 HOH HOH . J 7 HOH E 39 539 17 HOH HOH . J 7 HOH E 40 540 85 HOH HOH . J 7 HOH E 41 541 81 HOH HOH . J 7 HOH E 42 542 197 HOH HOH . J 7 HOH E 43 543 128 HOH HOH . J 7 HOH E 44 544 86 HOH HOH . J 7 HOH E 45 545 25 HOH HOH . J 7 HOH E 46 546 141 HOH HOH . J 7 HOH E 47 547 68 HOH HOH . J 7 HOH E 48 548 41 HOH HOH . J 7 HOH E 49 549 132 HOH HOH . J 7 HOH E 50 550 156 HOH HOH . J 7 HOH E 51 551 16 HOH HOH . J 7 HOH E 52 552 54 HOH HOH . J 7 HOH E 53 553 211 HOH HOH . J 7 HOH E 54 554 58 HOH HOH . J 7 HOH E 55 555 101 HOH HOH . J 7 HOH E 56 556 75 HOH HOH . J 7 HOH E 57 557 91 HOH HOH . J 7 HOH E 58 558 212 HOH HOH . J 7 HOH E 59 559 9 HOH HOH . J 7 HOH E 60 560 105 HOH HOH . J 7 HOH E 61 561 183 HOH HOH . J 7 HOH E 62 562 56 HOH HOH . J 7 HOH E 63 563 193 HOH HOH . J 7 HOH E 64 564 106 HOH HOH . J 7 HOH E 65 565 37 HOH HOH . J 7 HOH E 66 566 158 HOH HOH . J 7 HOH E 67 567 14 HOH HOH . J 7 HOH E 68 568 22 HOH HOH . J 7 HOH E 69 569 178 HOH HOH . J 7 HOH E 70 570 83 HOH HOH . J 7 HOH E 71 571 64 HOH HOH . J 7 HOH E 72 572 95 HOH HOH . J 7 HOH E 73 573 13 HOH HOH . J 7 HOH E 74 574 38 HOH HOH . J 7 HOH E 75 575 27 HOH HOH . J 7 HOH E 76 576 84 HOH HOH . J 7 HOH E 77 577 168 HOH HOH . J 7 HOH E 78 578 119 HOH HOH . J 7 HOH E 79 579 34 HOH HOH . J 7 HOH E 80 580 48 HOH HOH . J 7 HOH E 81 581 66 HOH HOH . J 7 HOH E 82 582 90 HOH HOH . J 7 HOH E 83 583 170 HOH HOH . J 7 HOH E 84 584 15 HOH HOH . J 7 HOH E 85 585 12 HOH HOH . J 7 HOH E 86 586 6 HOH HOH . J 7 HOH E 87 587 62 HOH HOH . J 7 HOH E 88 588 133 HOH HOH . J 7 HOH E 89 589 99 HOH HOH . J 7 HOH E 90 590 24 HOH HOH . J 7 HOH E 91 591 146 HOH HOH . J 7 HOH E 92 592 157 HOH HOH . J 7 HOH E 93 593 154 HOH HOH . J 7 HOH E 94 594 184 HOH HOH . J 7 HOH E 95 595 57 HOH HOH . J 7 HOH E 96 596 150 HOH HOH . J 7 HOH E 97 597 162 HOH HOH . J 7 HOH E 98 598 55 HOH HOH . J 7 HOH E 99 599 180 HOH HOH . J 7 HOH E 100 600 145 HOH HOH . J 7 HOH E 101 601 140 HOH HOH . J 7 HOH E 102 602 190 HOH HOH . J 7 HOH E 103 603 76 HOH HOH . J 7 HOH E 104 604 160 HOH HOH . J 7 HOH E 105 605 172 HOH HOH . J 7 HOH E 106 606 120 HOH HOH . J 7 HOH E 107 607 10 HOH HOH . J 7 HOH E 108 608 31 HOH HOH . J 7 HOH E 109 609 46 HOH HOH . J 7 HOH E 110 610 67 HOH HOH . J 7 HOH E 111 611 107 HOH HOH . J 7 HOH E 112 612 134 HOH HOH . J 7 HOH E 113 613 70 HOH HOH . J 7 HOH E 114 614 182 HOH HOH . J 7 HOH E 115 615 103 HOH HOH . J 7 HOH E 116 616 47 HOH HOH . J 7 HOH E 117 617 32 HOH HOH . J 7 HOH E 118 618 163 HOH HOH . J 7 HOH E 119 619 73 HOH HOH . J 7 HOH E 120 620 98 HOH HOH . J 7 HOH E 121 621 192 HOH HOH . J 7 HOH E 122 622 28 HOH HOH . J 7 HOH E 123 623 113 HOH HOH . J 7 HOH E 124 624 116 HOH HOH . J 7 HOH E 125 625 137 HOH HOH . J 7 HOH E 126 626 171 HOH HOH . J 7 HOH E 127 627 114 HOH HOH . J 7 HOH E 128 628 135 HOH HOH . J 7 HOH E 129 629 205 HOH HOH . J 7 HOH E 130 630 87 HOH HOH . J 7 HOH E 131 631 21 HOH HOH . J 7 HOH E 132 632 155 HOH HOH . J 7 HOH E 133 633 33 HOH HOH . J 7 HOH E 134 634 92 HOH HOH . J 7 HOH E 135 635 185 HOH HOH . J 7 HOH E 136 636 43 HOH HOH . J 7 HOH E 137 637 117 HOH HOH . J 7 HOH E 138 638 161 HOH HOH . J 7 HOH E 139 639 35 HOH HOH . J 7 HOH E 140 640 50 HOH HOH . J 7 HOH E 141 641 88 HOH HOH . J 7 HOH E 142 642 23 HOH HOH . J 7 HOH E 143 643 40 HOH HOH . J 7 HOH E 144 644 124 HOH HOH . J 7 HOH E 145 645 147 HOH HOH . J 7 HOH E 146 646 69 HOH HOH . J 7 HOH E 147 647 65 HOH HOH . J 7 HOH E 148 648 108 HOH HOH . J 7 HOH E 149 649 45 HOH HOH . J 7 HOH E 150 650 51 HOH HOH . J 7 HOH E 151 651 121 HOH HOH . J 7 HOH E 152 652 26 HOH HOH . J 7 HOH E 153 653 5 HOH HOH . J 7 HOH E 154 654 187 HOH HOH . J 7 HOH E 155 655 82 HOH HOH . J 7 HOH E 156 656 115 HOH HOH . J 7 HOH E 157 657 186 HOH HOH . J 7 HOH E 158 658 89 HOH HOH . J 7 HOH E 159 659 196 HOH HOH . J 7 HOH E 160 660 130 HOH HOH . J 7 HOH E 161 661 188 HOH HOH . J 7 HOH E 162 662 72 HOH HOH . J 7 HOH E 163 663 207 HOH HOH . J 7 HOH E 164 664 159 HOH HOH . J 7 HOH E 165 665 203 HOH HOH . J 7 HOH E 166 666 97 HOH HOH . J 7 HOH E 167 667 138 HOH HOH . J 7 HOH E 168 668 200 HOH HOH . J 7 HOH E 169 669 164 HOH HOH . J 7 HOH E 170 670 195 HOH HOH . J 7 HOH E 171 671 179 HOH HOH . J 7 HOH E 172 672 126 HOH HOH . J 7 HOH E 173 673 204 HOH HOH . J 7 HOH E 174 674 111 HOH HOH . J 7 HOH E 175 675 144 HOH HOH . J 7 HOH E 176 676 29 HOH HOH . J 7 HOH E 177 677 177 HOH HOH . J 7 HOH E 178 678 189 HOH HOH . J 7 HOH E 179 679 202 HOH HOH . J 7 HOH E 180 680 210 HOH HOH . J 7 HOH E 181 681 208 HOH HOH . J 7 HOH E 182 682 93 HOH HOH . J 7 HOH E 183 683 118 HOH HOH . J 7 HOH E 184 684 80 HOH HOH . J 7 HOH E 185 685 44 HOH HOH . J 7 HOH E 186 686 53 HOH HOH . J 7 HOH E 187 687 112 HOH HOH . J 7 HOH E 188 688 191 HOH HOH . J 7 HOH E 189 689 136 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 9.806 _atom_site.Cartn_y 36.238 _atom_site.Cartn_z -7.004 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 405 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 42 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 1104 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #