data_6SC9
#
_model_server_result.job_id            aFzLj2yekWYcTVL9qqotdg 
_model_server_result.datetime_utc      '2024-11-07 06:33:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sc9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":2007}' 
#
_entry.id    6SC9 
#
_exptl.entry_id    6SC9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6SC9 
_cell.length_a            66.127 
_cell.length_b            87.052 
_cell.length_c            241.538 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SC9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    'I 2 2' 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf2 C SG CYS 22 C CYS 22 1_555 C SG CYS 96 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
covale ? covale1 A SG CYS 189 A CYS 885 1_555 D C14 L68 . A L68 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? 
metalc ? metalc1 A SG CYS 3 A CYS 699 1_555 E ZN ZN . A ZN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? 
metalc ? metalc2 A SG CYS 6 A CYS 702 1_555 E ZN ZN . A ZN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc3 A SG CYS 21 A CYS 717 1_555 F ZN ZN . A ZN 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? 
metalc ? metalc4 A SG CYS 23 A CYS 719 1_555 F ZN ZN . A ZN 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? 
metalc ? metalc5 A SG CYS 26 A CYS 722 1_555 E ZN ZN . A ZN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? 
metalc ? metalc6 A SG CYS 29 A CYS 725 1_555 E ZN ZN . A ZN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? 
metalc ? metalc7 A SG CYS 48 A CYS 744 1_555 F ZN ZN . A ZN 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? 
metalc ? metalc8 A SG CYS 51 A CYS 747 1_555 F ZN ZN . A ZN 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? 
metalc ? metalc9 A SG CYS 103 A CYS 799 1_555 G ZN ZN . A ZN 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? 
metalc ? metalc10 A SG CYS 106 A CYS 802 1_555 G ZN ZN . A ZN 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc11 A SG CYS 121 A CYS 817 1_555 G ZN ZN . A ZN 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc12 A SG CYS 124 A CYS 820 1_555 G ZN ZN . A ZN 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc13 A SG CYS 129 A CYS 825 1_555 H ZN ZN . A ZN 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? 
metalc ? metalc14 A SG CYS 132 A CYS 828 1_555 H ZN ZN . A ZN 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc15 A NE2 HIS 140 A HIS 836 1_555 H ZN ZN . A ZN 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc16 A SG CYS 145 A CYS 841 1_555 H ZN ZN . A ZN 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc17 A SG CYS 175 A CYS 871 1_555 I ZN ZN . A ZN 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? 
metalc ? metalc18 A SG CYS 178 A CYS 874 1_555 I ZN ZN . A ZN 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc19 A SG CYS 194 A CYS 890 1_555 I ZN ZN . A ZN 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? 
metalc ? metalc20 A SG CYS 197 A CYS 893 1_555 I ZN ZN . A ZN 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? 
metalc ? metalc21 A SG CYS 202 A CYS 898 1_555 J ZN ZN . A ZN 2007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? 
metalc ? metalc22 A SG CYS 205 A CYS 901 1_555 J ZN ZN . A ZN 2007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc23 A SG CYS 215 A CYS 911 1_555 K ZN ZN . A ZN 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc24 A SG CYS 220 A CYS 916 1_555 K ZN ZN . A ZN 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc25 A NE2 HIS 227 A HIS 923 1_555 K ZN ZN . A ZN 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? 
metalc ? metalc26 A NE2 HIS 229 A HIS 925 1_555 K ZN ZN . A ZN 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc27 A ND1 HIS 230 A HIS 926 1_555 J ZN ZN . A ZN 2007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
metalc ? metalc28 A SG CYS 234 A CYS 930 1_555 J ZN ZN . A ZN 2007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? 
metalc ? metalc29 A SG CYS 273 A CYS 969 1_555 L ZN ZN . A ZN 2009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc30 A SG CYS 290 A CYS 986 1_555 L ZN ZN . A ZN 2009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? 
metalc ? metalc31 A ND1 HIS 305 A HIS 1001 1_555 L ZN ZN . A ZN 2009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6SC9 
_atom_sites.fract_transf_matrix[1][1]    0.015122 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011487 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00414 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 L68 A 1 2001 2001 L68 LIG . 
E 4 ZN A 1 2002 1 ZN ZN . 
F 4 ZN A 1 2003 2 ZN ZN . 
G 4 ZN A 1 2004 3 ZN ZN . 
H 4 ZN A 1 2005 4 ZN ZN . 
I 4 ZN A 1 2006 5 ZN ZN . 
J 4 ZN A 1 2007 6 ZN ZN . 
K 4 ZN A 1 2008 7 ZN ZN . 
L 4 ZN A 1 2009 8 ZN ZN . 
M 5 SO4 A 1 2010 5 SO4 SO4 . 
N 6 CL A 1 2011 3 CL CL . 
O 5 SO4 B 1 201 6 SO4 SO4 . 
P 6 CL B 1 202 4 CL CL . 
Q 7 HOH A 1 2101 47 HOH HOH . 
Q 7 HOH A 2 2102 13 HOH HOH . 
Q 7 HOH A 3 2103 12 HOH HOH . 
Q 7 HOH A 4 2104 7 HOH HOH . 
Q 7 HOH A 5 2105 6 HOH HOH . 
Q 7 HOH A 6 2106 27 HOH HOH . 
Q 7 HOH A 7 2107 18 HOH HOH . 
Q 7 HOH A 8 2108 4 HOH HOH . 
Q 7 HOH A 9 2109 2 HOH HOH . 
Q 7 HOH A 10 2110 1 HOH HOH . 
Q 7 HOH A 11 2111 30 HOH HOH . 
Q 7 HOH A 12 2112 25 HOH HOH . 
Q 7 HOH A 13 2113 29 HOH HOH . 
Q 7 HOH A 14 2114 26 HOH HOH . 
Q 7 HOH A 15 2115 51 HOH HOH . 
Q 7 HOH A 16 2116 11 HOH HOH . 
Q 7 HOH A 17 2117 59 HOH HOH . 
Q 7 HOH A 18 2118 8 HOH HOH . 
Q 7 HOH A 19 2119 31 HOH HOH . 
Q 7 HOH A 20 2120 40 HOH HOH . 
Q 7 HOH A 21 2121 9 HOH HOH . 
Q 7 HOH A 22 2122 49 HOH HOH . 
Q 7 HOH A 23 2123 53 HOH HOH . 
Q 7 HOH A 24 2124 21 HOH HOH . 
Q 7 HOH A 25 2125 17 HOH HOH . 
Q 7 HOH A 26 2126 50 HOH HOH . 
Q 7 HOH A 27 2127 14 HOH HOH . 
Q 7 HOH A 28 2128 70 HOH HOH . 
Q 7 HOH A 29 2129 41 HOH HOH . 
Q 7 HOH A 30 2130 36 HOH HOH . 
Q 7 HOH A 31 2131 69 HOH HOH . 
Q 7 HOH A 32 2132 16 HOH HOH . 
Q 7 HOH A 33 2133 42 HOH HOH . 
Q 7 HOH A 34 2134 62 HOH HOH . 
Q 7 HOH A 35 2135 46 HOH HOH . 
Q 7 HOH A 36 2136 55 HOH HOH . 
Q 7 HOH A 37 2137 38 HOH HOH . 
Q 7 HOH A 38 2138 19 HOH HOH . 
Q 7 HOH A 39 2139 44 HOH HOH . 
Q 7 HOH A 40 2140 65 HOH HOH . 
Q 7 HOH A 41 2141 68 HOH HOH . 
Q 7 HOH A 42 2142 67 HOH HOH . 
Q 7 HOH A 43 2143 45 HOH HOH . 
R 7 HOH B 1 301 48 HOH HOH . 
R 7 HOH B 2 302 32 HOH HOH . 
R 7 HOH B 3 303 34 HOH HOH . 
R 7 HOH B 4 304 58 HOH HOH . 
R 7 HOH B 5 305 23 HOH HOH . 
R 7 HOH B 6 306 56 HOH HOH . 
R 7 HOH B 7 307 37 HOH HOH . 
R 7 HOH B 8 308 60 HOH HOH . 
S 7 HOH C 1 201 3 HOH HOH . 
S 7 HOH C 2 202 15 HOH HOH . 
S 7 HOH C 3 203 43 HOH HOH . 
S 7 HOH C 4 204 28 HOH HOH . 
S 7 HOH C 5 205 35 HOH HOH . 
S 7 HOH C 6 206 54 HOH HOH . 
S 7 HOH C 7 207 20 HOH HOH . 
S 7 HOH C 8 208 61 HOH HOH . 
S 7 HOH C 9 209 52 HOH HOH . 
S 7 HOH C 10 210 66 HOH HOH . 
S 7 HOH C 11 211 5 HOH HOH . 
S 7 HOH C 12 212 22 HOH HOH . 
S 7 HOH C 13 213 24 HOH HOH . 
S 7 HOH C 14 214 63 HOH HOH . 
S 7 HOH C 15 215 39 HOH HOH . 
S 7 HOH C 16 216 33 HOH HOH . 
S 7 HOH C 17 217 64 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -34.543 
_atom_site.Cartn_y               60.283 
_atom_site.Cartn_z               70.403 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        50.76 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           2007 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#