data_6SCR # _model_server_result.job_id s6qjmbFxCXLR3YhADUB5ZQ _model_server_result.datetime_utc '2025-07-02 05:46:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6scr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6SCR # _exptl.entry_id 6SCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6SCR _cell.length_a 70.681 _cell.length_b 70.681 _cell.length_c 64.787 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall 'P 6c' _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 35.3405 61.211542 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -35.3405 61.211542 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6SCR _atom_sites.fract_transf_matrix[1][1] 0.014148 _atom_sites.fract_transf_matrix[1][2] 0.008168 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016337 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015435 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 201 1 EDO EDO . D 3 HOH A 1 301 13 HOH HOH . D 3 HOH A 2 302 46 HOH HOH . D 3 HOH A 3 303 89 HOH HOH . D 3 HOH A 4 304 117 HOH HOH . D 3 HOH A 5 305 140 HOH HOH . D 3 HOH A 6 306 53 HOH HOH . D 3 HOH A 7 307 50 HOH HOH . D 3 HOH A 8 308 79 HOH HOH . D 3 HOH A 9 309 25 HOH HOH . D 3 HOH A 10 310 29 HOH HOH . D 3 HOH A 11 311 42 HOH HOH . D 3 HOH A 12 312 15 HOH HOH . D 3 HOH A 13 313 138 HOH HOH . D 3 HOH A 14 314 6 HOH HOH . D 3 HOH A 15 315 1 HOH HOH . D 3 HOH A 16 316 16 HOH HOH . D 3 HOH A 17 317 66 HOH HOH . D 3 HOH A 18 318 87 HOH HOH . D 3 HOH A 19 319 84 HOH HOH . D 3 HOH A 20 320 95 HOH HOH . D 3 HOH A 21 321 54 HOH HOH . D 3 HOH A 22 322 72 HOH HOH . D 3 HOH A 23 323 70 HOH HOH . D 3 HOH A 24 324 31 HOH HOH . D 3 HOH A 25 325 9 HOH HOH . D 3 HOH A 26 326 18 HOH HOH . D 3 HOH A 27 327 23 HOH HOH . D 3 HOH A 28 328 129 HOH HOH . D 3 HOH A 29 329 59 HOH HOH . D 3 HOH A 30 330 61 HOH HOH . D 3 HOH A 31 331 101 HOH HOH . D 3 HOH A 32 332 60 HOH HOH . D 3 HOH A 33 333 47 HOH HOH . D 3 HOH A 34 334 83 HOH HOH . D 3 HOH A 35 335 4 HOH HOH . D 3 HOH A 36 336 76 HOH HOH . D 3 HOH A 37 337 26 HOH HOH . D 3 HOH A 38 338 28 HOH HOH . D 3 HOH A 39 339 62 HOH HOH . D 3 HOH A 40 340 7 HOH HOH . D 3 HOH A 41 341 124 HOH HOH . D 3 HOH A 42 342 34 HOH HOH . D 3 HOH A 43 343 37 HOH HOH . D 3 HOH A 44 344 108 HOH HOH . D 3 HOH A 45 345 35 HOH HOH . D 3 HOH A 46 346 134 HOH HOH . D 3 HOH A 47 347 73 HOH HOH . D 3 HOH A 48 348 49 HOH HOH . D 3 HOH A 49 349 2 HOH HOH . D 3 HOH A 50 350 142 HOH HOH . D 3 HOH A 51 351 64 HOH HOH . D 3 HOH A 52 352 127 HOH HOH . D 3 HOH A 53 353 100 HOH HOH . D 3 HOH A 54 354 82 HOH HOH . D 3 HOH A 55 355 141 HOH HOH . D 3 HOH A 56 356 110 HOH HOH . D 3 HOH A 57 357 106 HOH HOH . D 3 HOH A 58 358 133 HOH HOH . D 3 HOH A 59 359 126 HOH HOH . D 3 HOH A 60 360 135 HOH HOH . D 3 HOH A 61 361 130 HOH HOH . D 3 HOH A 62 362 132 HOH HOH . D 3 HOH A 63 363 119 HOH HOH . D 3 HOH A 64 364 69 HOH HOH . D 3 HOH A 65 365 120 HOH HOH . D 3 HOH A 66 366 71 HOH HOH . D 3 HOH A 67 367 148 HOH HOH . D 3 HOH A 68 368 145 HOH HOH . D 3 HOH A 69 369 104 HOH HOH . D 3 HOH A 70 370 109 HOH HOH . D 3 HOH A 71 371 65 HOH HOH . D 3 HOH A 72 372 75 HOH HOH . D 3 HOH A 73 373 48 HOH HOH . D 3 HOH A 74 374 45 HOH HOH . D 3 HOH A 75 375 92 HOH HOH . D 3 HOH A 76 376 56 HOH HOH . D 3 HOH A 77 377 93 HOH HOH . D 3 HOH A 78 378 123 HOH HOH . D 3 HOH A 79 379 147 HOH HOH . D 3 HOH A 80 380 94 HOH HOH . D 3 HOH A 81 381 74 HOH HOH . D 3 HOH A 82 382 121 HOH HOH . E 3 HOH B 1 201 137 HOH HOH . E 3 HOH B 2 202 136 HOH HOH . E 3 HOH B 3 203 41 HOH HOH . E 3 HOH B 4 204 33 HOH HOH . E 3 HOH B 5 205 52 HOH HOH . E 3 HOH B 6 206 139 HOH HOH . E 3 HOH B 7 207 78 HOH HOH . E 3 HOH B 8 208 115 HOH HOH . E 3 HOH B 9 209 3 HOH HOH . E 3 HOH B 10 210 40 HOH HOH . E 3 HOH B 11 211 58 HOH HOH . E 3 HOH B 12 212 44 HOH HOH . E 3 HOH B 13 213 86 HOH HOH . E 3 HOH B 14 214 55 HOH HOH . E 3 HOH B 15 215 17 HOH HOH . E 3 HOH B 16 216 19 HOH HOH . E 3 HOH B 17 217 116 HOH HOH . E 3 HOH B 18 218 14 HOH HOH . E 3 HOH B 19 219 105 HOH HOH . E 3 HOH B 20 220 8 HOH HOH . E 3 HOH B 21 221 91 HOH HOH . E 3 HOH B 22 222 85 HOH HOH . E 3 HOH B 23 223 36 HOH HOH . E 3 HOH B 24 224 5 HOH HOH . E 3 HOH B 25 225 97 HOH HOH . E 3 HOH B 26 226 24 HOH HOH . E 3 HOH B 27 227 90 HOH HOH . E 3 HOH B 28 228 51 HOH HOH . E 3 HOH B 29 229 88 HOH HOH . E 3 HOH B 30 230 38 HOH HOH . E 3 HOH B 31 231 32 HOH HOH . E 3 HOH B 32 232 143 HOH HOH . E 3 HOH B 33 233 20 HOH HOH . E 3 HOH B 34 234 21 HOH HOH . E 3 HOH B 35 235 81 HOH HOH . E 3 HOH B 36 236 80 HOH HOH . E 3 HOH B 37 237 96 HOH HOH . E 3 HOH B 38 238 10 HOH HOH . E 3 HOH B 39 239 113 HOH HOH . E 3 HOH B 40 240 57 HOH HOH . E 3 HOH B 41 241 11 HOH HOH . E 3 HOH B 42 242 103 HOH HOH . E 3 HOH B 43 243 63 HOH HOH . E 3 HOH B 44 244 43 HOH HOH . E 3 HOH B 45 245 22 HOH HOH . E 3 HOH B 46 246 27 HOH HOH . E 3 HOH B 47 247 30 HOH HOH . E 3 HOH B 48 248 122 HOH HOH . E 3 HOH B 49 249 68 HOH HOH . E 3 HOH B 50 250 131 HOH HOH . E 3 HOH B 51 251 12 HOH HOH . E 3 HOH B 52 252 107 HOH HOH . E 3 HOH B 53 253 111 HOH HOH . E 3 HOH B 54 254 118 HOH HOH . E 3 HOH B 55 255 98 HOH HOH . E 3 HOH B 56 256 144 HOH HOH . E 3 HOH B 57 257 114 HOH HOH . E 3 HOH B 58 258 39 HOH HOH . E 3 HOH B 59 259 67 HOH HOH . E 3 HOH B 60 260 77 HOH HOH . E 3 HOH B 61 261 128 HOH HOH . E 3 HOH B 62 262 112 HOH HOH . E 3 HOH B 63 263 146 HOH HOH . E 3 HOH B 64 264 99 HOH HOH . E 3 HOH B 65 265 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 -35.751 41.072 -15.615 1 49.82 ? C1 EDO 201 A 1 HETATM 2 O O1 EDO . . . C 2 -34.517 40.723 -14.976 1 47.99 ? O1 EDO 201 A 1 HETATM 3 C C2 EDO . . . C 2 -35.49 41.237 -17.107 1 52.67 ? C2 EDO 201 A 1 HETATM 4 O O2 EDO . . . C 2 -35.072 39.974 -17.639 1 54.86 ? O2 EDO 201 A 1 HETATM 5 H H11 EDO . . . C 2 -36.141 42.003 -15.197 1 59.8 ? H11 EDO 201 A 1 HETATM 6 H H12 EDO . . . C 2 -36.496 40.291 -15.448 1 59.8 ? H12 EDO 201 A 1 HETATM 7 H HO1 EDO . . . C 2 -34.661 40.637 -14.023 1 57.6 ? HO1 EDO 201 A 1 HETATM 8 H H21 EDO . . . C 2 -34.715 41.988 -17.272 1 63.22 ? H21 EDO 201 A 1 HETATM 9 H H22 EDO . . . C 2 -36.397 41.575 -17.612 1 63.22 ? H22 EDO 201 A 1 HETATM 10 H HO2 EDO . . . C 2 -34.918 40.06 -18.59 1 65.84 ? HO2 EDO 201 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #