data_6SD0 # _model_server_result.job_id esNmDOGU8W_Wk-93X0bf_Q _model_server_result.datetime_utc '2024-12-21 14:31:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sd0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1101}' # _entry.id 6SD0 # _exptl.entry_id 6SD0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SD0 _cell.length_a 167.852 _cell.length_b 167.852 _cell.length_c 519.99 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SD0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? octameric 8 author_defined_assembly 1 ? octameric 8 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I,K 1 1,4 A,C,E,G,I,K 1 2 A,C,E,G,I,K 1 6 B,D,F,H,J 2 1,3,5,7 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 167.852 167.852 0 3 'crystal symmetry operation' 2_575 -x,-y+2,z -1 0 0 0 -1 0 0 0 1 0 335.704 0 4 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 167.852 0 0 5 'crystal symmetry operation' 3_665 -y+1,x+1,z 0 -1 0 1 0 0 0 0 1 167.852 167.852 0 6 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 167.852 0 7 'crystal symmetry operation' 4_465 y-1,-x+1,z 0 1 0 -1 0 0 0 0 1 -167.852 167.852 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 511 A ALA 511 1_555 E MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc2 A O GLY 513 A GLY 513 1_555 E MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? metalc ? metalc3 A O GLY 575 A GLY 575 1_555 E MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc4 A OE1 GLU 584 A GLU 584 1_555 E MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc5 A OE1 GLU 586 A GLU 586 1_555 E MG MG . A MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc6 B O ALA 511 B ALA 511 1_555 F MG MG . B MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc7 B O GLY 513 B GLY 513 1_555 F MG MG . B MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? metalc ? metalc8 B OE1 GLU 584 B GLU 584 1_555 F MG MG . B MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc9 B OE1 GLU 586 B GLU 586 1_555 F MG MG . B MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc10 C O ALA 511 C ALA 511 1_555 G MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.828 ? metalc ? metalc11 C O GLY 513 C GLY 513 1_555 G MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc12 C O GLY 575 C GLY 575 1_555 G MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? metalc ? metalc13 C OE1 GLU 584 C GLU 584 1_555 G MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.794 ? metalc ? metalc14 C OE1 GLU 586 C GLU 586 1_555 G MG MG . C MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc15 D O ALA 511 D ALA 511 1_555 H MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc16 D N GLY 513 D GLY 513 1_555 H MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.933 ? metalc ? metalc17 D O GLY 513 D GLY 513 1_555 H MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc18 D O GLY 575 D GLY 575 1_555 H MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? metalc ? metalc19 D OE1 GLU 584 D GLU 584 1_555 H MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6SD0 _atom_sites.fract_transf_matrix[1][1] 0.005958 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005958 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001923 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 1101 1 MG MG . F 2 MG B 1 1101 2 MG MG . G 2 MG C 1 1101 3 MG MG . H 2 MG D 1 1101 4 MG MG . I 3 HOH A 1 1201 2 HOH HOH . J 3 HOH B 1 1201 1 HOH HOH . K 3 HOH C 1 1201 3 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x 41.165 _atom_site.Cartn_y 138.547 _atom_site.Cartn_z -121.447 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1101 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 114 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #