data_6SD9 # _model_server_result.job_id 5Vfeb54EpqWbCLrc_a8K6w _model_server_result.datetime_utc '2024-11-22 19:50:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sd9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1402}' # _entry.id 6SD9 # _exptl.entry_id 6SD9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 632.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-(3-fluoro-4-{[6-methoxy-7-(3-morpholin-4-ylpropoxy)quinolin-4-yl]oxy}phenyl)-N'-(4-fluorophenyl)cyclopropane-1,1-dicarboxamide" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SD9 _cell.length_a 41.88 _cell.length_b 73.73 _cell.length_c 91.47 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SD9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C34 H34 F2 N4 O6' _chem_comp.formula_weight 632.654 _chem_comp.id 88Z _chem_comp.mon_nstd_flag . _chem_comp.name "N-(3-fluoro-4-{[6-methoxy-7-(3-morpholin-4-ylpropoxy)quinolin-4-yl]oxy}phenyl)-N'-(4-fluorophenyl)cyclopropane-1,1-dicarboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 88Z doub 1 n y C1 C6 88Z sing 2 n y C1 O11 88Z sing 3 n n C3 C2 88Z sing 4 n y O13 C2 88Z sing 5 n n C3 C4 88Z doub 6 n y C3 H3 88Z sing 7 n n N7 C4 88Z sing 8 n y C4 C5 88Z sing 9 n y C5 C10 88Z sing 10 n y C5 C6 88Z doub 11 n y C6 H6 88Z sing 12 n n C8 N7 88Z doub 13 n y C8 C9 88Z sing 14 n y C8 H8 88Z sing 15 n n C9 C10 88Z doub 16 n y C9 H9 88Z sing 17 n n C10 O14 88Z sing 18 n n O11 C12 88Z sing 19 n n C12 H12 88Z sing 20 n n C12 H12A 88Z sing 21 n n C12 H12B 88Z sing 22 n n O13 C23 88Z sing 23 n n C15 O14 88Z sing 24 n n C16 C15 88Z doub 25 n y C15 C20 88Z sing 26 n y C17 C16 88Z sing 27 n y C16 H16 88Z sing 28 n n C17 C18 88Z doub 29 n y C17 H17 88Z sing 30 n n N22 C18 88Z sing 31 n n C18 C19 88Z sing 32 n y C19 C20 88Z doub 33 n y C19 H19 88Z sing 34 n n C20 F21 88Z sing 35 n n N22 C32 88Z sing 36 n n N22 HN22 88Z sing 37 n n C23 C24 88Z sing 38 n n C23 H23 88Z sing 39 n n C23 H23A 88Z sing 40 n n C25 C24 88Z sing 41 n n C24 H24 88Z sing 42 n n C24 H24A 88Z sing 43 n n N26 C25 88Z sing 44 n n C25 H25 88Z sing 45 n n C25 H25A 88Z sing 46 n n C27 N26 88Z sing 47 n n N26 C31 88Z sing 48 n n C28 C27 88Z sing 49 n n C27 H27 88Z sing 50 n n C27 H27A 88Z sing 51 n n C28 O29 88Z sing 52 n n C28 H28 88Z sing 53 n n C28 H28A 88Z sing 54 n n O29 C30 88Z sing 55 n n C30 C31 88Z sing 56 n n C30 H30 88Z sing 57 n n C30 H30A 88Z sing 58 n n C31 H31 88Z sing 59 n n C31 H31A 88Z sing 60 n n C33 C32 88Z sing 61 n n C32 O36 88Z doub 62 n n C34 C33 88Z sing 63 n n C33 C45 88Z sing 64 n n C33 C46 88Z sing 65 n n N35 C34 88Z sing 66 n n O37 C34 88Z doub 67 n n C38 N35 88Z sing 68 n n N35 HN35 88Z sing 69 n n C43 C38 88Z doub 70 n y C39 C38 88Z sing 71 n y C40 C39 88Z doub 72 n y C39 H39 88Z sing 73 n n C41 C40 88Z sing 74 n y C40 H40 88Z sing 75 n n F44 C41 88Z sing 76 n n C41 C42 88Z doub 77 n y C42 C43 88Z sing 78 n y C42 H42 88Z sing 79 n n C43 H43 88Z sing 80 n n C45 C46 88Z sing 81 n n C45 H45 88Z sing 82 n n C45 H45A 88Z sing 83 n n C46 H46 88Z sing 84 n n C46 H46A 88Z sing 85 n n # _atom_sites.entry_id 6SD9 _atom_sites.fract_transf_matrix[1][1] 0.023878 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013563 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010933 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 1401 1 CL CL . C 3 88Z A 1 1402 1 88Z INH . D 4 HOH A 1 1501 42 HOH HOH . D 4 HOH A 2 1502 51 HOH HOH . D 4 HOH A 3 1503 77 HOH HOH . D 4 HOH A 4 1504 24 HOH HOH . D 4 HOH A 5 1505 55 HOH HOH . D 4 HOH A 6 1506 23 HOH HOH . D 4 HOH A 7 1507 31 HOH HOH . D 4 HOH A 8 1508 53 HOH HOH . D 4 HOH A 9 1509 33 HOH HOH . D 4 HOH A 10 1510 25 HOH HOH . D 4 HOH A 11 1511 9 HOH HOH . D 4 HOH A 12 1512 19 HOH HOH . D 4 HOH A 13 1513 32 HOH HOH . D 4 HOH A 14 1514 2 HOH HOH . D 4 HOH A 15 1515 13 HOH HOH . D 4 HOH A 16 1516 82 HOH HOH . D 4 HOH A 17 1517 50 HOH HOH . D 4 HOH A 18 1518 83 HOH HOH . D 4 HOH A 19 1519 34 HOH HOH . D 4 HOH A 20 1520 35 HOH HOH . D 4 HOH A 21 1521 85 HOH HOH . D 4 HOH A 22 1522 61 HOH HOH . D 4 HOH A 23 1523 52 HOH HOH . D 4 HOH A 24 1524 74 HOH HOH . D 4 HOH A 25 1525 44 HOH HOH . D 4 HOH A 26 1526 80 HOH HOH . D 4 HOH A 27 1527 16 HOH HOH . D 4 HOH A 28 1528 66 HOH HOH . D 4 HOH A 29 1529 27 HOH HOH . D 4 HOH A 30 1530 58 HOH HOH . D 4 HOH A 31 1531 26 HOH HOH . D 4 HOH A 32 1532 69 HOH HOH . D 4 HOH A 33 1533 75 HOH HOH . D 4 HOH A 34 1534 20 HOH HOH . D 4 HOH A 35 1535 6 HOH HOH . D 4 HOH A 36 1536 17 HOH HOH . D 4 HOH A 37 1537 86 HOH HOH . D 4 HOH A 38 1538 76 HOH HOH . D 4 HOH A 39 1539 22 HOH HOH . D 4 HOH A 40 1540 30 HOH HOH . D 4 HOH A 41 1541 64 HOH HOH . D 4 HOH A 42 1542 68 HOH HOH . D 4 HOH A 43 1543 39 HOH HOH . D 4 HOH A 44 1544 63 HOH HOH . D 4 HOH A 45 1545 15 HOH HOH . D 4 HOH A 46 1546 21 HOH HOH . D 4 HOH A 47 1547 59 HOH HOH . D 4 HOH A 48 1548 41 HOH HOH . D 4 HOH A 49 1549 78 HOH HOH . D 4 HOH A 50 1550 56 HOH HOH . D 4 HOH A 51 1551 57 HOH HOH . D 4 HOH A 52 1552 28 HOH HOH . D 4 HOH A 53 1553 1 HOH HOH . D 4 HOH A 54 1554 87 HOH HOH . D 4 HOH A 55 1555 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 88Z . . . C 3 -7.267 21.714 -31.109 1 37.92 ? C1 88Z 1402 A 1 HETATM 2 C C2 88Z . . . C 3 -8.345 22.638 -31.033 1 38.13 ? C2 88Z 1402 A 1 HETATM 3 C C3 88Z . . . C 3 -9.632 22.19 -30.956 1 35.31 ? C3 88Z 1402 A 1 HETATM 4 C C4 88Z . . . C 3 -9.909 20.806 -30.951 1 32.21 ? C4 88Z 1402 A 1 HETATM 5 C C5 88Z . . . C 3 -8.836 19.884 -31.026 1 32.17 ? C5 88Z 1402 A 1 HETATM 6 C C6 88Z . . . C 3 -7.51 20.37 -31.105 1 34.16 ? C6 88Z 1402 A 1 HETATM 7 N N7 88Z . . . C 3 -11.222 20.411 -30.867 1 33.89 ? N7 88Z 1402 A 1 HETATM 8 C C8 88Z . . . C 3 -11.463 19.107 -30.86 1 33.74 ? C8 88Z 1402 A 1 HETATM 9 C C9 88Z . . . C 3 -10.495 18.113 -30.932 1 29.98 ? C9 88Z 1402 A 1 HETATM 10 C C10 88Z . . . C 3 -9.173 18.506 -31.012 1 33.46 ? C10 88Z 1402 A 1 HETATM 11 O O11 88Z . . . C 3 -6.026 22.289 -31.182 1 39.83 ? O11 88Z 1402 A 1 HETATM 12 C C12 88Z . . . C 3 -4.885 21.428 -31.208 1 40.1 ? C12 88Z 1402 A 1 HETATM 13 O O13 88Z . . . C 3 -7.968 23.955 -31.047 1 41.91 ? O13 88Z 1402 A 1 HETATM 14 O O14 88Z . . . C 3 -8.106 17.614 -31.084 1 35.11 ? O14 88Z 1402 A 1 HETATM 15 C C15 88Z . . . C 3 -8.302 16.319 -30.632 1 38.57 ? C15 88Z 1402 A 1 HETATM 16 C C16 88Z . . . C 3 -8.275 16.008 -29.28 1 41.49 ? C16 88Z 1402 A 1 HETATM 17 C C17 88Z . . . C 3 -8.479 14.699 -28.871 1 42.59 ? C17 88Z 1402 A 1 HETATM 18 C C18 88Z . . . C 3 -8.715 13.693 -29.805 1 38.95 ? C18 88Z 1402 A 1 HETATM 19 C C19 88Z . . . C 3 -8.744 14.004 -31.159 1 37.29 ? C19 88Z 1402 A 1 HETATM 20 C C20 88Z . . . C 3 -8.539 15.304 -31.537 1 39.29 ? C20 88Z 1402 A 1 HETATM 21 F F21 88Z . . . C 3 -8.571 15.615 -32.85 1 42.32 ? F21 88Z 1402 A 1 HETATM 22 N N22 88Z . . . C 3 -8.91 12.396 -29.279 1 38.74 ? N22 88Z 1402 A 1 HETATM 23 C C23 88Z . . . C 3 -8.978 24.945 -31.304 1 46.72 ? C23 88Z 1402 A 1 HETATM 24 C C24 88Z . . . C 3 -8.302 26.196 -31.798 1 51.41 ? C24 88Z 1402 A 1 HETATM 25 C C25 88Z . . . C 3 -7.592 26.941 -30.687 1 56.19 ? C25 88Z 1402 A 1 HETATM 26 N N26 88Z . . . C 3 -6.888 28.146 -31.134 1 61.36 ? N26 88Z 1402 A 1 HETATM 27 C C27 88Z . . . C 3 -5.446 27.878 -31.277 1 65.25 ? C27 88Z 1402 A 1 HETATM 28 C C28 88Z . . . C 3 -4.75 29.071 -31.894 1 67.58 ? C28 88Z 1402 A 1 HETATM 29 O O29 88Z . . . C 3 -5.266 30.31 -31.386 1 68.78 ? O29 88Z 1402 A 1 HETATM 30 C C30 88Z . . . C 3 -5.866 30.119 -30.097 1 67.43 ? C30 88Z 1402 A 1 HETATM 31 C C31 88Z . . . C 3 -7.099 29.249 -30.18 1 65.13 ? C31 88Z 1402 A 1 HETATM 32 C C32 88Z . . . C 3 -9.151 11.219 -29.9 1 40.67 ? C32 88Z 1402 A 1 HETATM 33 C C33 88Z . . . C 3 -9.323 9.988 -28.982 1 37 ? C33 88Z 1402 A 1 HETATM 34 C C34 88Z . . . C 3 -9.666 10.292 -27.489 1 38.72 ? C34 88Z 1402 A 1 HETATM 35 N N35 88Z . . . C 3 -10.027 9.248 -26.704 1 39.53 ? N35 88Z 1402 A 1 HETATM 36 O O36 88Z . . . C 3 -9.227 11.107 -31.113 1 46.16 ? O36 88Z 1402 A 1 HETATM 37 O O37 88Z . . . C 3 -9.612 11.426 -27.033 1 38.16 ? O37 88Z 1402 A 1 HETATM 38 C C38 88Z . . . C 3 -10.214 9.344 -25.308 1 38.07 ? C38 88Z 1402 A 1 HETATM 39 C C39 88Z . . . C 3 -9.397 8.645 -24.427 1 39.76 ? C39 88Z 1402 A 1 HETATM 40 C C40 88Z . . . C 3 -9.587 8.756 -23.059 1 42.01 ? C40 88Z 1402 A 1 HETATM 41 C C41 88Z . . . C 3 -10.594 9.57 -22.606 1 41.38 ? C41 88Z 1402 A 1 HETATM 42 C C42 88Z . . . C 3 -11.417 10.275 -23.442 1 41.25 ? C42 88Z 1402 A 1 HETATM 43 C C43 88Z . . . C 3 -11.223 10.16 -24.807 1 40.64 ? C43 88Z 1402 A 1 HETATM 44 F F44 88Z . . . C 3 -10.786 9.681 -21.272 1 43.55 ? F44 88Z 1402 A 1 HETATM 45 C C45 88Z . . . C 3 -9.706 8.671 -29.661 1 36.04 ? C45 88Z 1402 A 1 HETATM 46 C C46 88Z . . . C 3 -8.307 8.866 -29.216 1 35.21 ? C46 88Z 1402 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 46 #