data_6SDD # _model_server_result.job_id nTKOORrDLLKpdF8KJbgF1w _model_server_result.datetime_utc '2024-11-28 18:16:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sdd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1401}' # _entry.id 6SDD # _exptl.entry_id 6SDD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 512.893 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{4-[(2-amino-3-chloropyridin-4-yl)oxy]-3-fluorophenyl}-4-ethoxy-1-(4-fluorophenyl)-2-oxo-1,2-dihydropyridine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SDD _cell.length_a 57.956 _cell.length_b 67.814 _cell.length_c 90.047 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SDD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H19 Cl F2 N4 O4' _chem_comp.formula_weight 512.893 _chem_comp.id 353 _chem_comp.mon_nstd_flag . _chem_comp.name N-{4-[(2-amino-3-chloropyridin-4-yl)oxy]-3-fluorophenyl}-4-ethoxy-1-(4-fluorophenyl)-2-oxo-1,2-dihydropyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C5 353 doub 1 n y C1 C10 353 sing 2 n y C2 C6 353 sing 3 n y C2 C10 353 doub 4 n y C3 C4 353 doub 5 n y C3 C11 353 sing 6 n y C4 C12 353 sing 7 n y C5 C14 353 sing 8 n y C6 C14 353 doub 9 n y C7 C9 353 doub 10 n y C7 C13 353 sing 11 n y C8 C11 353 doub 12 n y C8 C15 353 sing 13 n y C9 N26 353 sing 14 n y C10 N27 353 sing 15 n n C11 N29 353 sing 16 n n C12 C15 353 doub 17 n y C12 O32 353 sing 18 n n C13 C16 353 doub 19 n y C13 O32 353 sing 20 n n C14 F34 353 sing 21 n n C15 F35 353 sing 22 n n C16 C17 353 sing 23 n y C16 CL36 353 sing 24 n n C17 N26 353 doub 25 n y C17 N28 353 sing 26 n n C18 C19 353 doub 27 n n C18 C21 353 sing 28 n n C19 N27 353 sing 29 n n C20 C21 353 doub 30 n n C20 C22 353 sing 31 n n C20 C23 353 sing 32 n n C21 O33 353 sing 33 n n C22 N27 353 sing 34 n n C22 O30 353 doub 35 n n C23 N29 353 sing 36 n n C23 O31 353 doub 37 n n C24 C25 353 sing 38 n n C25 O33 353 sing 39 n n C1 H1 353 sing 40 n n C2 H2 353 sing 41 n n C3 H3 353 sing 42 n n C4 H4 353 sing 43 n n C5 H5 353 sing 44 n n C6 H6 353 sing 45 n n C7 H7 353 sing 46 n n C8 H8 353 sing 47 n n C9 H9 353 sing 48 n n C18 H18 353 sing 49 n n C19 H19 353 sing 50 n n C24 H24 353 sing 51 n n C24 H24A 353 sing 52 n n C24 H24B 353 sing 53 n n C25 H25 353 sing 54 n n C25 H25A 353 sing 55 n n N28 HN28 353 sing 56 n n N28 HN2A 353 sing 57 n n N29 HN29 353 sing 58 n n # _atom_sites.entry_id 6SDD _atom_sites.fract_transf_matrix[1][1] 0.017254 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014746 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 353 A 1 1401 1 353 INH . C 3 GOL A 1 1402 1 GOL GOL . D 4 HOH A 1 1501 217 HOH HOH . D 4 HOH A 2 1502 5 HOH HOH . D 4 HOH A 3 1503 23 HOH HOH . D 4 HOH A 4 1504 139 HOH HOH . D 4 HOH A 5 1505 159 HOH HOH . D 4 HOH A 6 1506 6 HOH HOH . D 4 HOH A 7 1507 229 HOH HOH . D 4 HOH A 8 1508 61 HOH HOH . D 4 HOH A 9 1509 27 HOH HOH . D 4 HOH A 10 1510 58 HOH HOH . D 4 HOH A 11 1511 235 HOH HOH . D 4 HOH A 12 1512 17 HOH HOH . D 4 HOH A 13 1513 140 HOH HOH . D 4 HOH A 14 1514 226 HOH HOH . D 4 HOH A 15 1515 225 HOH HOH . D 4 HOH A 16 1516 82 HOH HOH . D 4 HOH A 17 1517 115 HOH HOH . D 4 HOH A 18 1518 234 HOH HOH . D 4 HOH A 19 1519 60 HOH HOH . D 4 HOH A 20 1520 41 HOH HOH . D 4 HOH A 21 1521 227 HOH HOH . D 4 HOH A 22 1522 141 HOH HOH . D 4 HOH A 23 1523 9 HOH HOH . D 4 HOH A 24 1524 30 HOH HOH . D 4 HOH A 25 1525 74 HOH HOH . D 4 HOH A 26 1526 87 HOH HOH . D 4 HOH A 27 1527 35 HOH HOH . D 4 HOH A 28 1528 158 HOH HOH . D 4 HOH A 29 1529 1 HOH HOH . D 4 HOH A 30 1530 12 HOH HOH . D 4 HOH A 31 1531 105 HOH HOH . D 4 HOH A 32 1532 75 HOH HOH . D 4 HOH A 33 1533 43 HOH HOH . D 4 HOH A 34 1534 100 HOH HOH . D 4 HOH A 35 1535 106 HOH HOH . D 4 HOH A 36 1536 237 HOH HOH . D 4 HOH A 37 1537 55 HOH HOH . D 4 HOH A 38 1538 173 HOH HOH . D 4 HOH A 39 1539 165 HOH HOH . D 4 HOH A 40 1540 66 HOH HOH . D 4 HOH A 41 1541 7 HOH HOH . D 4 HOH A 42 1542 233 HOH HOH . D 4 HOH A 43 1543 125 HOH HOH . D 4 HOH A 44 1544 32 HOH HOH . D 4 HOH A 45 1545 95 HOH HOH . D 4 HOH A 46 1546 63 HOH HOH . D 4 HOH A 47 1547 108 HOH HOH . D 4 HOH A 48 1548 20 HOH HOH . D 4 HOH A 49 1549 28 HOH HOH . D 4 HOH A 50 1550 196 HOH HOH . D 4 HOH A 51 1551 19 HOH HOH . D 4 HOH A 52 1552 175 HOH HOH . D 4 HOH A 53 1553 8 HOH HOH . D 4 HOH A 54 1554 13 HOH HOH . D 4 HOH A 55 1555 88 HOH HOH . D 4 HOH A 56 1556 4 HOH HOH . D 4 HOH A 57 1557 174 HOH HOH . D 4 HOH A 58 1558 2 HOH HOH . D 4 HOH A 59 1559 21 HOH HOH . D 4 HOH A 60 1560 90 HOH HOH . D 4 HOH A 61 1561 211 HOH HOH . D 4 HOH A 62 1562 146 HOH HOH . D 4 HOH A 63 1563 224 HOH HOH . D 4 HOH A 64 1564 51 HOH HOH . D 4 HOH A 65 1565 236 HOH HOH . D 4 HOH A 66 1566 91 HOH HOH . D 4 HOH A 67 1567 54 HOH HOH . D 4 HOH A 68 1568 36 HOH HOH . D 4 HOH A 69 1569 26 HOH HOH . D 4 HOH A 70 1570 31 HOH HOH . D 4 HOH A 71 1571 44 HOH HOH . D 4 HOH A 72 1572 47 HOH HOH . D 4 HOH A 73 1573 72 HOH HOH . D 4 HOH A 74 1574 25 HOH HOH . D 4 HOH A 75 1575 15 HOH HOH . D 4 HOH A 76 1576 163 HOH HOH . D 4 HOH A 77 1577 10 HOH HOH . D 4 HOH A 78 1578 45 HOH HOH . D 4 HOH A 79 1579 191 HOH HOH . D 4 HOH A 80 1580 37 HOH HOH . D 4 HOH A 81 1581 68 HOH HOH . D 4 HOH A 82 1582 111 HOH HOH . D 4 HOH A 83 1583 3 HOH HOH . D 4 HOH A 84 1584 97 HOH HOH . D 4 HOH A 85 1585 119 HOH HOH . D 4 HOH A 86 1586 49 HOH HOH . D 4 HOH A 87 1587 157 HOH HOH . D 4 HOH A 88 1588 193 HOH HOH . D 4 HOH A 89 1589 171 HOH HOH . D 4 HOH A 90 1590 86 HOH HOH . D 4 HOH A 91 1591 65 HOH HOH . D 4 HOH A 92 1592 77 HOH HOH . D 4 HOH A 93 1593 231 HOH HOH . D 4 HOH A 94 1594 178 HOH HOH . D 4 HOH A 95 1595 153 HOH HOH . D 4 HOH A 96 1596 190 HOH HOH . D 4 HOH A 97 1597 232 HOH HOH . D 4 HOH A 98 1598 208 HOH HOH . D 4 HOH A 99 1599 98 HOH HOH . D 4 HOH A 100 1600 92 HOH HOH . D 4 HOH A 101 1601 122 HOH HOH . D 4 HOH A 102 1602 62 HOH HOH . D 4 HOH A 103 1603 14 HOH HOH . D 4 HOH A 104 1604 22 HOH HOH . D 4 HOH A 105 1605 94 HOH HOH . D 4 HOH A 106 1606 192 HOH HOH . D 4 HOH A 107 1607 123 HOH HOH . D 4 HOH A 108 1608 57 HOH HOH . D 4 HOH A 109 1609 223 HOH HOH . D 4 HOH A 110 1610 33 HOH HOH . D 4 HOH A 111 1611 164 HOH HOH . D 4 HOH A 112 1612 145 HOH HOH . D 4 HOH A 113 1613 184 HOH HOH . D 4 HOH A 114 1614 46 HOH HOH . D 4 HOH A 115 1615 11 HOH HOH . D 4 HOH A 116 1616 214 HOH HOH . D 4 HOH A 117 1617 181 HOH HOH . D 4 HOH A 118 1618 18 HOH HOH . D 4 HOH A 119 1619 126 HOH HOH . D 4 HOH A 120 1620 114 HOH HOH . D 4 HOH A 121 1621 127 HOH HOH . D 4 HOH A 122 1622 172 HOH HOH . D 4 HOH A 123 1623 39 HOH HOH . D 4 HOH A 124 1624 42 HOH HOH . D 4 HOH A 125 1625 142 HOH HOH . D 4 HOH A 126 1626 202 HOH HOH . D 4 HOH A 127 1627 182 HOH HOH . D 4 HOH A 128 1628 212 HOH HOH . D 4 HOH A 129 1629 199 HOH HOH . D 4 HOH A 130 1630 124 HOH HOH . D 4 HOH A 131 1631 155 HOH HOH . D 4 HOH A 132 1632 134 HOH HOH . D 4 HOH A 133 1633 135 HOH HOH . D 4 HOH A 134 1634 149 HOH HOH . D 4 HOH A 135 1635 71 HOH HOH . D 4 HOH A 136 1636 73 HOH HOH . D 4 HOH A 137 1637 187 HOH HOH . D 4 HOH A 138 1638 133 HOH HOH . D 4 HOH A 139 1639 16 HOH HOH . D 4 HOH A 140 1640 161 HOH HOH . D 4 HOH A 141 1641 151 HOH HOH . D 4 HOH A 142 1642 48 HOH HOH . D 4 HOH A 143 1643 113 HOH HOH . D 4 HOH A 144 1644 79 HOH HOH . D 4 HOH A 145 1645 238 HOH HOH . D 4 HOH A 146 1646 156 HOH HOH . D 4 HOH A 147 1647 203 HOH HOH . D 4 HOH A 148 1648 205 HOH HOH . D 4 HOH A 149 1649 162 HOH HOH . D 4 HOH A 150 1650 154 HOH HOH . D 4 HOH A 151 1651 103 HOH HOH . D 4 HOH A 152 1652 104 HOH HOH . D 4 HOH A 153 1653 143 HOH HOH . D 4 HOH A 154 1654 230 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 353 . . . B 2 -9.588 -4.746 7.181 1 27.85 ? C1 353 1401 A 1 HETATM 2 C C2 353 . . . B 2 -11.232 -6.511 7.076 1 27.23 ? C2 353 1401 A 1 HETATM 3 C C3 353 . . . B 2 -14.02 -6.04 13.173 1 27.12 ? C3 353 1401 A 1 HETATM 4 C C4 353 . . . B 2 -14.458 -6.554 14.383 1 27.63 ? C4 353 1401 A 1 HETATM 5 C C5 353 . . . B 2 -8.598 -5.644 6.812 1 29.84 ? C5 353 1401 A 1 HETATM 6 C C6 353 . . . B 2 -10.248 -7.412 6.708 1 28.7 ? C6 353 1401 A 1 HETATM 7 C C7 353 . . . B 2 -17.158 -8.391 15.118 1 27.57 ? C7 353 1401 A 1 HETATM 8 C C8 353 . . . B 2 -15.828 -4.446 13.18 1 29.5 ? C8 353 1401 A 1 HETATM 9 C C9 353 . . . B 2 -17.732 -9.642 15.266 1 28.1 ? C9 353 1401 A 1 HETATM 10 C C10 353 . . . B 2 -10.909 -5.176 7.318 1 27.9 ? C10 353 1401 A 1 HETATM 11 C C11 353 . . . B 2 -14.698 -4.987 12.565 1 27.77 ? C11 353 1401 A 1 HETATM 12 C C12 353 . . . B 2 -15.584 -6.02 15.001 1 28.01 ? C12 353 1401 A 1 HETATM 13 C C13 353 . . . B 2 -16.666 -7.767 16.259 1 27.68 ? C13 353 1401 A 1 HETATM 14 C C14 353 . . . B 2 -8.956 -6.954 6.586 1 29.75 ? C14 353 1401 A 1 HETATM 15 C C15 353 . . . B 2 -16.242 -4.977 14.379 1 30.44 ? C15 353 1401 A 1 HETATM 16 C C16 353 . . . B 2 -16.766 -8.41 17.497 1 32.96 ? C16 353 1401 A 1 HETATM 17 C C17 353 . . . B 2 -17.365 -9.677 17.548 1 29.68 ? C17 353 1401 A 1 HETATM 18 C C18 353 . . . B 2 -13.185 -2.284 7.105 1 29.75 ? C18 353 1401 A 1 HETATM 19 C C19 353 . . . B 2 -12.234 -3.194 6.832 1 30.46 ? C19 353 1401 A 1 HETATM 20 C C20 353 . . . B 2 -13.657 -3.466 9.24 1 28.45 ? C20 353 1401 A 1 HETATM 21 C C21 353 . . . B 2 -13.93 -2.402 8.331 1 30.82 ? C21 353 1401 A 1 HETATM 22 C C22 353 . . . B 2 -12.618 -4.446 8.929 1 27.45 ? C22 353 1401 A 1 HETATM 23 C C23 353 . . . B 2 -14.448 -3.537 10.504 1 27.35 ? C23 353 1401 A 1 HETATM 24 C C24 353 . . . B 2 -16.345 -0.992 6.632 1 31.78 ? C24 353 1401 A 1 HETATM 25 C C25 353 . . . B 2 -15.239 -0.46 7.505 1 32.26 ? C25 353 1401 A 1 HETATM 26 N N26 353 . . . B 2 -17.843 -10.285 16.439 1 28.56 ? N26 353 1401 A 1 HETATM 27 N N27 353 . . . B 2 -11.942 -4.245 7.698 1 28.2 ? N27 353 1401 A 1 HETATM 28 N N28 353 . . . B 2 -17.474 -10.319 18.714 1 29.01 ? N28 353 1401 A 1 HETATM 29 N N29 353 . . . B 2 -14.134 -4.574 11.332 1 26.99 ? N29 353 1401 A 1 HETATM 30 O O30 353 . . . B 2 -12.314 -5.395 9.651 1 26.94 ? O30 353 1401 A 1 HETATM 31 O O31 353 . . . B 2 -15.314 -2.704 10.764 1 28.52 ? O31 353 1401 A 1 HETATM 32 O O32 353 . . . B 2 -16.068 -6.506 16.215 1 26.83 ? O32 353 1401 A 1 HETATM 33 O O33 353 . . . B 2 -14.884 -1.444 8.54 1 31.37 ? O33 353 1401 A 1 HETATM 34 F F34 353 . . . B 2 -7.989 -7.836 6.224 1 32.62 ? F34 353 1401 A 1 HETATM 35 F F35 353 . . . B 2 -17.337 -4.463 14.986 1 34.15 ? F35 353 1401 A 1 HETATM 36 CL CL36 353 . . . B 2 -16.153 -7.634 18.905 1 44.96 ? CL36 353 1401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 402 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 36 #