data_6SDD # _model_server_result.job_id G7X0QyZfgKH0nX9j6upsuQ _model_server_result.datetime_utc '2024-10-10 09:31:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sdd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1402}' # _entry.id 6SDD # _exptl.entry_id 6SDD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SDD _cell.length_a 57.956 _cell.length_b 67.814 _cell.length_c 90.047 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SDD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 187 n n C1 C2 GOL sing 188 n n C1 H11 GOL sing 189 n n C1 H12 GOL sing 190 n n O1 HO1 GOL sing 191 n n C2 O2 GOL sing 192 n n C2 C3 GOL sing 193 n n C2 H2 GOL sing 194 n n O2 HO2 GOL sing 195 n n C3 O3 GOL sing 196 n n C3 H31 GOL sing 197 n n C3 H32 GOL sing 198 n n O3 HO3 GOL sing 199 n n # _atom_sites.entry_id 6SDD _atom_sites.fract_transf_matrix[1][1] 0.017254 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014746 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 353 A 1 1401 1 353 INH . C 3 GOL A 1 1402 1 GOL GOL . D 4 HOH A 1 1501 217 HOH HOH . D 4 HOH A 2 1502 5 HOH HOH . D 4 HOH A 3 1503 23 HOH HOH . D 4 HOH A 4 1504 139 HOH HOH . D 4 HOH A 5 1505 159 HOH HOH . D 4 HOH A 6 1506 6 HOH HOH . D 4 HOH A 7 1507 229 HOH HOH . D 4 HOH A 8 1508 61 HOH HOH . D 4 HOH A 9 1509 27 HOH HOH . D 4 HOH A 10 1510 58 HOH HOH . D 4 HOH A 11 1511 235 HOH HOH . D 4 HOH A 12 1512 17 HOH HOH . D 4 HOH A 13 1513 140 HOH HOH . D 4 HOH A 14 1514 226 HOH HOH . D 4 HOH A 15 1515 225 HOH HOH . D 4 HOH A 16 1516 82 HOH HOH . D 4 HOH A 17 1517 115 HOH HOH . D 4 HOH A 18 1518 234 HOH HOH . D 4 HOH A 19 1519 60 HOH HOH . D 4 HOH A 20 1520 41 HOH HOH . D 4 HOH A 21 1521 227 HOH HOH . D 4 HOH A 22 1522 141 HOH HOH . D 4 HOH A 23 1523 9 HOH HOH . D 4 HOH A 24 1524 30 HOH HOH . D 4 HOH A 25 1525 74 HOH HOH . D 4 HOH A 26 1526 87 HOH HOH . D 4 HOH A 27 1527 35 HOH HOH . D 4 HOH A 28 1528 158 HOH HOH . D 4 HOH A 29 1529 1 HOH HOH . D 4 HOH A 30 1530 12 HOH HOH . D 4 HOH A 31 1531 105 HOH HOH . D 4 HOH A 32 1532 75 HOH HOH . D 4 HOH A 33 1533 43 HOH HOH . D 4 HOH A 34 1534 100 HOH HOH . D 4 HOH A 35 1535 106 HOH HOH . D 4 HOH A 36 1536 237 HOH HOH . D 4 HOH A 37 1537 55 HOH HOH . D 4 HOH A 38 1538 173 HOH HOH . D 4 HOH A 39 1539 165 HOH HOH . D 4 HOH A 40 1540 66 HOH HOH . D 4 HOH A 41 1541 7 HOH HOH . D 4 HOH A 42 1542 233 HOH HOH . D 4 HOH A 43 1543 125 HOH HOH . D 4 HOH A 44 1544 32 HOH HOH . D 4 HOH A 45 1545 95 HOH HOH . D 4 HOH A 46 1546 63 HOH HOH . D 4 HOH A 47 1547 108 HOH HOH . D 4 HOH A 48 1548 20 HOH HOH . D 4 HOH A 49 1549 28 HOH HOH . D 4 HOH A 50 1550 196 HOH HOH . D 4 HOH A 51 1551 19 HOH HOH . D 4 HOH A 52 1552 175 HOH HOH . D 4 HOH A 53 1553 8 HOH HOH . D 4 HOH A 54 1554 13 HOH HOH . D 4 HOH A 55 1555 88 HOH HOH . D 4 HOH A 56 1556 4 HOH HOH . D 4 HOH A 57 1557 174 HOH HOH . D 4 HOH A 58 1558 2 HOH HOH . D 4 HOH A 59 1559 21 HOH HOH . D 4 HOH A 60 1560 90 HOH HOH . D 4 HOH A 61 1561 211 HOH HOH . D 4 HOH A 62 1562 146 HOH HOH . D 4 HOH A 63 1563 224 HOH HOH . D 4 HOH A 64 1564 51 HOH HOH . D 4 HOH A 65 1565 236 HOH HOH . D 4 HOH A 66 1566 91 HOH HOH . D 4 HOH A 67 1567 54 HOH HOH . D 4 HOH A 68 1568 36 HOH HOH . D 4 HOH A 69 1569 26 HOH HOH . D 4 HOH A 70 1570 31 HOH HOH . D 4 HOH A 71 1571 44 HOH HOH . D 4 HOH A 72 1572 47 HOH HOH . D 4 HOH A 73 1573 72 HOH HOH . D 4 HOH A 74 1574 25 HOH HOH . D 4 HOH A 75 1575 15 HOH HOH . D 4 HOH A 76 1576 163 HOH HOH . D 4 HOH A 77 1577 10 HOH HOH . D 4 HOH A 78 1578 45 HOH HOH . D 4 HOH A 79 1579 191 HOH HOH . D 4 HOH A 80 1580 37 HOH HOH . D 4 HOH A 81 1581 68 HOH HOH . D 4 HOH A 82 1582 111 HOH HOH . D 4 HOH A 83 1583 3 HOH HOH . D 4 HOH A 84 1584 97 HOH HOH . D 4 HOH A 85 1585 119 HOH HOH . D 4 HOH A 86 1586 49 HOH HOH . D 4 HOH A 87 1587 157 HOH HOH . D 4 HOH A 88 1588 193 HOH HOH . D 4 HOH A 89 1589 171 HOH HOH . D 4 HOH A 90 1590 86 HOH HOH . D 4 HOH A 91 1591 65 HOH HOH . D 4 HOH A 92 1592 77 HOH HOH . D 4 HOH A 93 1593 231 HOH HOH . D 4 HOH A 94 1594 178 HOH HOH . D 4 HOH A 95 1595 153 HOH HOH . D 4 HOH A 96 1596 190 HOH HOH . D 4 HOH A 97 1597 232 HOH HOH . D 4 HOH A 98 1598 208 HOH HOH . D 4 HOH A 99 1599 98 HOH HOH . D 4 HOH A 100 1600 92 HOH HOH . D 4 HOH A 101 1601 122 HOH HOH . D 4 HOH A 102 1602 62 HOH HOH . D 4 HOH A 103 1603 14 HOH HOH . D 4 HOH A 104 1604 22 HOH HOH . D 4 HOH A 105 1605 94 HOH HOH . D 4 HOH A 106 1606 192 HOH HOH . D 4 HOH A 107 1607 123 HOH HOH . D 4 HOH A 108 1608 57 HOH HOH . D 4 HOH A 109 1609 223 HOH HOH . D 4 HOH A 110 1610 33 HOH HOH . D 4 HOH A 111 1611 164 HOH HOH . D 4 HOH A 112 1612 145 HOH HOH . D 4 HOH A 113 1613 184 HOH HOH . D 4 HOH A 114 1614 46 HOH HOH . D 4 HOH A 115 1615 11 HOH HOH . D 4 HOH A 116 1616 214 HOH HOH . D 4 HOH A 117 1617 181 HOH HOH . D 4 HOH A 118 1618 18 HOH HOH . D 4 HOH A 119 1619 126 HOH HOH . D 4 HOH A 120 1620 114 HOH HOH . D 4 HOH A 121 1621 127 HOH HOH . D 4 HOH A 122 1622 172 HOH HOH . D 4 HOH A 123 1623 39 HOH HOH . D 4 HOH A 124 1624 42 HOH HOH . D 4 HOH A 125 1625 142 HOH HOH . D 4 HOH A 126 1626 202 HOH HOH . D 4 HOH A 127 1627 182 HOH HOH . D 4 HOH A 128 1628 212 HOH HOH . D 4 HOH A 129 1629 199 HOH HOH . D 4 HOH A 130 1630 124 HOH HOH . D 4 HOH A 131 1631 155 HOH HOH . D 4 HOH A 132 1632 134 HOH HOH . D 4 HOH A 133 1633 135 HOH HOH . D 4 HOH A 134 1634 149 HOH HOH . D 4 HOH A 135 1635 71 HOH HOH . D 4 HOH A 136 1636 73 HOH HOH . D 4 HOH A 137 1637 187 HOH HOH . D 4 HOH A 138 1638 133 HOH HOH . D 4 HOH A 139 1639 16 HOH HOH . D 4 HOH A 140 1640 161 HOH HOH . D 4 HOH A 141 1641 151 HOH HOH . D 4 HOH A 142 1642 48 HOH HOH . D 4 HOH A 143 1643 113 HOH HOH . D 4 HOH A 144 1644 79 HOH HOH . D 4 HOH A 145 1645 238 HOH HOH . D 4 HOH A 146 1646 156 HOH HOH . D 4 HOH A 147 1647 203 HOH HOH . D 4 HOH A 148 1648 205 HOH HOH . D 4 HOH A 149 1649 162 HOH HOH . D 4 HOH A 150 1650 154 HOH HOH . D 4 HOH A 151 1651 103 HOH HOH . D 4 HOH A 152 1652 104 HOH HOH . D 4 HOH A 153 1653 143 HOH HOH . D 4 HOH A 154 1654 230 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -4.097 -24.11 8.62 1 45.46 ? C1 GOL 1402 A 1 HETATM 2 O O1 GOL . . . C 3 -5.029 -23.647 7.655 1 43.42 ? O1 GOL 1402 A 1 HETATM 3 C C2 GOL . . . C 3 -4.794 -24.363 9.936 1 47.95 ? C2 GOL 1402 A 1 HETATM 4 O O2 GOL . . . C 3 -5.797 -25.362 9.765 1 49.78 ? O2 GOL 1402 A 1 HETATM 5 C C3 GOL . . . C 3 -3.828 -24.785 11.018 1 47.9 ? C3 GOL 1402 A 1 HETATM 6 O O3 GOL . . . C 3 -4.51 -24.902 12.26 1 48.34 ? O3 GOL 1402 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #