data_6SDI
#
_model_server_result.job_id            '_i53j810BNBxD6aXGoS63Q' 
_model_server_result.datetime_utc      '2024-11-21 16:52:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sdi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    6SDI 
#
_exptl.entry_id    6SDI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              200.59 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MERCURY (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.093 
_cell.angle_gamma         90 
_cell.entry_id            6SDI 
_cell.length_a            42.262 
_cell.length_b            41.639 
_cell.length_c            72.267 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SDI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 99 A HIS 94 1_555 D ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc2 A NE2 HIS 101 A HIS 96 1_555 D ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc3 A ND1 HIS 124 A HIS 119 1_555 D ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
metalc ? metalc4 A O VAL 139 A VAL 135 1_555 B HG HG . A HG 301 1_555 ? ? ? ? B ? ? ? ? ? ? ? 3.148 ? 
metalc ? metalc5 A O GLN 141 A GLN 137 1_555 C HG BE7 . A BE7 302 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.959 ? 
metalc ? metalc6 A O GLU 209 A GLU 205 1_555 C HG BE7 . A BE7 302 1_555 ? ? ? ? A ? ? ? ? ? ? ? 3.097 ? 
metalc ? metalc7 A SG CYS 210 A CYS 206 1_555 B HG HG . A HG 301 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.698 ? 
metalc ? metalc8 A SG CYS 210 A CYS 206 1_555 C HG BE7 . A BE7 302 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc9 B HG HG . A HG 301 1_555 G O HOH . A HOH 486 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.477 ? 
metalc ? metalc10 C HG BE7 . A BE7 302 1_555 G O HOH . A HOH 486 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.943 ? 
metalc ? metalc11 D ZN ZN . A ZN 303 1_555 F N13 0VV . A 0VV 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? 
#
_chem_comp.formula           'Hg 2' 
_chem_comp.formula_weight    200.59 
_chem_comp.id                HG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MERCURY (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6SDI 
_atom_sites.fract_transf_matrix[1][1]    0.023662 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00594 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024016 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014267 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HG A 1 301 1 HG HG . 
C 3 BE7 A 1 302 1 BE7 BE7 . 
D 4 ZN A 1 303 1 ZN ZN . 
E 5 DMS A 1 304 1 DMS DMS . 
F 6 0VV A 1 305 1 0VV 0VV . 
G 7 HOH A 1 401 95 HOH HOH . 
G 7 HOH A 2 402 45 HOH HOH . 
G 7 HOH A 3 403 203 HOH HOH . 
G 7 HOH A 4 404 54 HOH HOH . 
G 7 HOH A 5 405 38 HOH HOH . 
G 7 HOH A 6 406 63 HOH HOH . 
G 7 HOH A 7 407 201 HOH HOH . 
G 7 HOH A 8 408 88 HOH HOH . 
G 7 HOH A 9 409 40 HOH HOH . 
G 7 HOH A 10 410 30 HOH HOH . 
G 7 HOH A 11 411 55 HOH HOH . 
G 7 HOH A 12 412 86 HOH HOH . 
G 7 HOH A 13 413 35 HOH HOH . 
G 7 HOH A 14 414 66 HOH HOH . 
G 7 HOH A 15 415 104 HOH HOH . 
G 7 HOH A 16 416 73 HOH HOH . 
G 7 HOH A 17 417 165 HOH HOH . 
G 7 HOH A 18 418 4 HOH HOH . 
G 7 HOH A 19 419 47 HOH HOH . 
G 7 HOH A 20 420 202 HOH HOH . 
G 7 HOH A 21 421 171 HOH HOH . 
G 7 HOH A 22 422 196 HOH HOH . 
G 7 HOH A 23 423 84 HOH HOH . 
G 7 HOH A 24 424 195 HOH HOH . 
G 7 HOH A 25 425 160 HOH HOH . 
G 7 HOH A 26 426 164 HOH HOH . 
G 7 HOH A 27 427 23 HOH HOH . 
G 7 HOH A 28 428 199 HOH HOH . 
G 7 HOH A 29 429 28 HOH HOH . 
G 7 HOH A 30 430 31 HOH HOH . 
G 7 HOH A 31 431 41 HOH HOH . 
G 7 HOH A 32 432 128 HOH HOH . 
G 7 HOH A 33 433 80 HOH HOH . 
G 7 HOH A 34 434 51 HOH HOH . 
G 7 HOH A 35 435 10 HOH HOH . 
G 7 HOH A 36 436 20 HOH HOH . 
G 7 HOH A 37 437 9 HOH HOH . 
G 7 HOH A 38 438 186 HOH HOH . 
G 7 HOH A 39 439 194 HOH HOH . 
G 7 HOH A 40 440 53 HOH HOH . 
G 7 HOH A 41 441 8 HOH HOH . 
G 7 HOH A 42 442 158 HOH HOH . 
G 7 HOH A 43 443 52 HOH HOH . 
G 7 HOH A 44 444 15 HOH HOH . 
G 7 HOH A 45 445 200 HOH HOH . 
G 7 HOH A 46 446 163 HOH HOH . 
G 7 HOH A 47 447 182 HOH HOH . 
G 7 HOH A 48 448 7 HOH HOH . 
G 7 HOH A 49 449 172 HOH HOH . 
G 7 HOH A 50 450 106 HOH HOH . 
G 7 HOH A 51 451 125 HOH HOH . 
G 7 HOH A 52 452 14 HOH HOH . 
G 7 HOH A 53 453 72 HOH HOH . 
G 7 HOH A 54 454 18 HOH HOH . 
G 7 HOH A 55 455 169 HOH HOH . 
G 7 HOH A 56 456 131 HOH HOH . 
G 7 HOH A 57 457 180 HOH HOH . 
G 7 HOH A 58 458 2 HOH HOH . 
G 7 HOH A 59 459 6 HOH HOH . 
G 7 HOH A 60 460 97 HOH HOH . 
G 7 HOH A 61 461 123 HOH HOH . 
G 7 HOH A 62 462 12 HOH HOH . 
G 7 HOH A 63 463 149 HOH HOH . 
G 7 HOH A 64 464 116 HOH HOH . 
G 7 HOH A 65 465 187 HOH HOH . 
G 7 HOH A 66 466 85 HOH HOH . 
G 7 HOH A 67 467 26 HOH HOH . 
G 7 HOH A 68 468 43 HOH HOH . 
G 7 HOH A 69 469 49 HOH HOH . 
G 7 HOH A 70 470 161 HOH HOH . 
G 7 HOH A 71 471 156 HOH HOH . 
G 7 HOH A 72 472 114 HOH HOH . 
G 7 HOH A 73 473 50 HOH HOH . 
G 7 HOH A 74 474 152 HOH HOH . 
G 7 HOH A 75 475 112 HOH HOH . 
G 7 HOH A 76 476 162 HOH HOH . 
G 7 HOH A 77 477 48 HOH HOH . 
G 7 HOH A 78 478 5 HOH HOH . 
G 7 HOH A 79 479 124 HOH HOH . 
G 7 HOH A 80 480 42 HOH HOH . 
G 7 HOH A 81 481 212 HOH HOH . 
G 7 HOH A 82 482 105 HOH HOH . 
G 7 HOH A 83 483 74 HOH HOH . 
G 7 HOH A 84 484 108 HOH HOH . 
G 7 HOH A 85 485 154 HOH HOH . 
G 7 HOH A 86 486 75 HOH HOH . 
G 7 HOH A 87 487 34 HOH HOH . 
G 7 HOH A 88 488 79 HOH HOH . 
G 7 HOH A 89 489 36 HOH HOH . 
G 7 HOH A 90 490 25 HOH HOH . 
G 7 HOH A 91 491 208 HOH HOH . 
G 7 HOH A 92 492 90 HOH HOH . 
G 7 HOH A 93 493 168 HOH HOH . 
G 7 HOH A 94 494 24 HOH HOH . 
G 7 HOH A 95 495 17 HOH HOH . 
G 7 HOH A 96 496 176 HOH HOH . 
G 7 HOH A 97 497 13 HOH HOH . 
G 7 HOH A 98 498 39 HOH HOH . 
G 7 HOH A 99 499 192 HOH HOH . 
G 7 HOH A 100 500 188 HOH HOH . 
G 7 HOH A 101 501 32 HOH HOH . 
G 7 HOH A 102 502 22 HOH HOH . 
G 7 HOH A 103 503 46 HOH HOH . 
G 7 HOH A 104 504 27 HOH HOH . 
G 7 HOH A 105 505 197 HOH HOH . 
G 7 HOH A 106 506 16 HOH HOH . 
G 7 HOH A 107 507 21 HOH HOH . 
G 7 HOH A 108 508 37 HOH HOH . 
G 7 HOH A 109 509 56 HOH HOH . 
G 7 HOH A 110 510 198 HOH HOH . 
G 7 HOH A 111 511 173 HOH HOH . 
G 7 HOH A 112 512 210 HOH HOH . 
G 7 HOH A 113 513 29 HOH HOH . 
G 7 HOH A 114 514 33 HOH HOH . 
G 7 HOH A 115 515 185 HOH HOH . 
G 7 HOH A 116 516 151 HOH HOH . 
G 7 HOH A 117 517 175 HOH HOH . 
G 7 HOH A 118 518 166 HOH HOH . 
G 7 HOH A 119 519 179 HOH HOH . 
G 7 HOH A 120 520 44 HOH HOH . 
G 7 HOH A 121 521 174 HOH HOH . 
G 7 HOH A 122 522 81 HOH HOH . 
G 7 HOH A 123 523 150 HOH HOH . 
G 7 HOH A 124 524 65 HOH HOH . 
G 7 HOH A 125 525 70 HOH HOH . 
G 7 HOH A 126 526 107 HOH HOH . 
G 7 HOH A 127 527 64 HOH HOH . 
G 7 HOH A 128 528 78 HOH HOH . 
G 7 HOH A 129 529 110 HOH HOH . 
G 7 HOH A 130 530 213 HOH HOH . 
G 7 HOH A 131 531 76 HOH HOH . 
G 7 HOH A 132 532 19 HOH HOH . 
G 7 HOH A 133 533 67 HOH HOH . 
G 7 HOH A 134 534 141 HOH HOH . 
G 7 HOH A 135 535 183 HOH HOH . 
G 7 HOH A 136 536 189 HOH HOH . 
G 7 HOH A 137 537 115 HOH HOH . 
G 7 HOH A 138 538 193 HOH HOH . 
G 7 HOH A 139 539 137 HOH HOH . 
G 7 HOH A 140 540 94 HOH HOH . 
G 7 HOH A 141 541 140 HOH HOH . 
G 7 HOH A 142 542 62 HOH HOH . 
G 7 HOH A 143 543 204 HOH HOH . 
G 7 HOH A 144 544 77 HOH HOH . 
G 7 HOH A 145 545 190 HOH HOH . 
G 7 HOH A 146 546 101 HOH HOH . 
G 7 HOH A 147 547 136 HOH HOH . 
G 7 HOH A 148 548 155 HOH HOH . 
G 7 HOH A 149 549 109 HOH HOH . 
G 7 HOH A 150 550 205 HOH HOH . 
G 7 HOH A 151 551 142 HOH HOH . 
G 7 HOH A 152 552 102 HOH HOH . 
G 7 HOH A 153 553 178 HOH HOH . 
G 7 HOH A 154 554 167 HOH HOH . 
G 7 HOH A 155 555 57 HOH HOH . 
G 7 HOH A 156 556 153 HOH HOH . 
G 7 HOH A 157 557 184 HOH HOH . 
G 7 HOH A 158 558 211 HOH HOH . 
G 7 HOH A 159 559 133 HOH HOH . 
G 7 HOH A 160 560 157 HOH HOH . 
G 7 HOH A 161 561 143 HOH HOH . 
G 7 HOH A 162 562 87 HOH HOH . 
G 7 HOH A 163 563 111 HOH HOH . 
G 7 HOH A 164 564 206 HOH HOH . 
G 7 HOH A 165 565 147 HOH HOH . 
G 7 HOH A 166 566 181 HOH HOH . 
G 7 HOH A 167 567 92 HOH HOH . 
G 7 HOH A 168 568 93 HOH HOH . 
G 7 HOH A 169 569 58 HOH HOH . 
G 7 HOH A 170 570 139 HOH HOH . 
G 7 HOH A 171 571 191 HOH HOH . 
G 7 HOH A 172 572 146 HOH HOH . 
G 7 HOH A 173 573 148 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           HG 
_atom_site.label_atom_id         HG 
_atom_site.label_comp_id         HG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          B 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -2.048 
_atom_site.Cartn_y               10.61 
_atom_site.Cartn_z               23.475 
_atom_site.occupancy             0.16 
_atom_site.B_iso_or_equiv        9.7 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          HG 
_atom_site.auth_comp_id          HG 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              70 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           403 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#