data_6SDT # _model_server_result.job_id GVQLG-osljZjolkfZWdXiA _model_server_result.datetime_utc '2024-11-26 09:40:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sdt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6SDT # _exptl.entry_id 6SDT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 313.266 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'phenyl-(4-sulfamoylphenoxy)phosphinic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SDT _cell.length_a 66.28 _cell.length_b 89.36 _cell.length_c 44.165 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SDT _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 58 A CYS 54 1_555 A SG CYS 182 A CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc1 A NE2 HIS 98 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc2 A NE2 HIS 100 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc3 A ND1 HIS 123 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C N1 L8N . A L8N 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? # _chem_comp.formula 'C12 H12 N O5 P S' _chem_comp.formula_weight 313.266 _chem_comp.id L8N _chem_comp.mon_nstd_flag . _chem_comp.name 'phenyl-(4-sulfamoylphenoxy)phosphinic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C10 L8N doub 173 n y C9 C8 L8N sing 174 n y C10 C11 L8N sing 175 n y C8 C7 L8N doub 176 n y C11 C12 L8N doub 177 n y C7 C12 L8N sing 178 n y C7 P1 L8N sing 179 n n O5 P1 L8N doub 180 n n P1 O3 L8N sing 181 n n P1 O4 L8N sing 182 n n O3 C4 L8N sing 183 n n C3 C4 L8N doub 184 n y C3 C2 L8N sing 185 n y C4 C5 L8N sing 186 n y C2 C1 L8N doub 187 n y C5 C6 L8N doub 188 n y C1 C6 L8N sing 189 n y C1 S1 L8N sing 190 n n O1 S1 L8N doub 191 n n S1 O2 L8N doub 192 n n S1 N1 L8N sing 193 n n N1 H1 L8N sing 194 n n N1 H2 L8N sing 195 n n C2 H3 L8N sing 196 n n C3 H4 L8N sing 197 n n C5 H5 L8N sing 198 n n C6 H6 L8N sing 199 n n C8 H7 L8N sing 200 n n C9 H8 L8N sing 201 n n C10 H9 L8N sing 202 n n C11 H10 L8N sing 203 n n C12 H11 L8N sing 204 n n O4 H12 L8N sing 205 n n # _atom_sites.entry_id 6SDT _atom_sites.fract_transf_matrix[1][1] 0.015088 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011191 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022642 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 263 ZN ZN . C 3 L8N A 1 302 1000 L8N A0N . D 4 HOH A 1 401 64 HOH HOH . D 4 HOH A 2 402 67 HOH HOH . D 4 HOH A 3 403 33 HOH HOH . D 4 HOH A 4 404 63 HOH HOH . D 4 HOH A 5 405 44 HOH HOH . D 4 HOH A 6 406 76 HOH HOH . D 4 HOH A 7 407 3 HOH HOH . D 4 HOH A 8 408 13 HOH HOH . D 4 HOH A 9 409 38 HOH HOH . D 4 HOH A 10 410 84 HOH HOH . D 4 HOH A 11 411 20 HOH HOH . D 4 HOH A 12 412 85 HOH HOH . D 4 HOH A 13 413 80 HOH HOH . D 4 HOH A 14 414 29 HOH HOH . D 4 HOH A 15 415 6 HOH HOH . D 4 HOH A 16 416 15 HOH HOH . D 4 HOH A 17 417 82 HOH HOH . D 4 HOH A 18 418 69 HOH HOH . D 4 HOH A 19 419 62 HOH HOH . D 4 HOH A 20 420 86 HOH HOH . D 4 HOH A 21 421 40 HOH HOH . D 4 HOH A 22 422 46 HOH HOH . D 4 HOH A 23 423 68 HOH HOH . D 4 HOH A 24 424 90 HOH HOH . D 4 HOH A 25 425 23 HOH HOH . D 4 HOH A 26 426 14 HOH HOH . D 4 HOH A 27 427 18 HOH HOH . D 4 HOH A 28 428 5 HOH HOH . D 4 HOH A 29 429 2 HOH HOH . D 4 HOH A 30 430 32 HOH HOH . D 4 HOH A 31 431 55 HOH HOH . D 4 HOH A 32 432 70 HOH HOH . D 4 HOH A 33 433 77 HOH HOH . D 4 HOH A 34 434 54 HOH HOH . D 4 HOH A 35 435 73 HOH HOH . D 4 HOH A 36 436 7 HOH HOH . D 4 HOH A 37 437 1 HOH HOH . D 4 HOH A 38 438 11 HOH HOH . D 4 HOH A 39 439 61 HOH HOH . D 4 HOH A 40 440 59 HOH HOH . D 4 HOH A 41 441 71 HOH HOH . D 4 HOH A 42 442 66 HOH HOH . D 4 HOH A 43 443 43 HOH HOH . D 4 HOH A 44 444 75 HOH HOH . D 4 HOH A 45 445 60 HOH HOH . D 4 HOH A 46 446 37 HOH HOH . D 4 HOH A 47 447 19 HOH HOH . D 4 HOH A 48 448 31 HOH HOH . D 4 HOH A 49 449 27 HOH HOH . D 4 HOH A 50 450 53 HOH HOH . D 4 HOH A 51 451 17 HOH HOH . D 4 HOH A 52 452 36 HOH HOH . D 4 HOH A 53 453 87 HOH HOH . D 4 HOH A 54 454 94 HOH HOH . D 4 HOH A 55 455 9 HOH HOH . D 4 HOH A 56 456 4 HOH HOH . D 4 HOH A 57 457 48 HOH HOH . D 4 HOH A 58 458 8 HOH HOH . D 4 HOH A 59 459 35 HOH HOH . D 4 HOH A 60 460 24 HOH HOH . D 4 HOH A 61 461 30 HOH HOH . D 4 HOH A 62 462 22 HOH HOH . D 4 HOH A 63 463 89 HOH HOH . D 4 HOH A 64 464 39 HOH HOH . D 4 HOH A 65 465 21 HOH HOH . D 4 HOH A 66 466 12 HOH HOH . D 4 HOH A 67 467 16 HOH HOH . D 4 HOH A 68 468 26 HOH HOH . D 4 HOH A 69 469 72 HOH HOH . D 4 HOH A 70 470 91 HOH HOH . D 4 HOH A 71 471 78 HOH HOH . D 4 HOH A 72 472 41 HOH HOH . D 4 HOH A 73 473 81 HOH HOH . D 4 HOH A 74 474 88 HOH HOH . D 4 HOH A 75 475 74 HOH HOH . D 4 HOH A 76 476 83 HOH HOH . D 4 HOH A 77 477 28 HOH HOH . D 4 HOH A 78 478 34 HOH HOH . D 4 HOH A 79 479 42 HOH HOH . D 4 HOH A 80 480 25 HOH HOH . D 4 HOH A 81 481 10 HOH HOH . D 4 HOH A 82 482 92 HOH HOH . D 4 HOH A 83 483 79 HOH HOH . D 4 HOH A 84 484 47 HOH HOH . D 4 HOH A 85 485 65 HOH HOH . D 4 HOH A 86 486 52 HOH HOH . D 4 HOH A 87 487 50 HOH HOH . D 4 HOH A 88 488 45 HOH HOH . D 4 HOH A 89 489 57 HOH HOH . D 4 HOH A 90 490 93 HOH HOH . D 4 HOH A 91 491 49 HOH HOH . D 4 HOH A 92 492 51 HOH HOH . D 4 HOH A 93 493 56 HOH HOH . D 4 HOH A 94 494 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 L8N . . . C 3 16.098 26.623 7.063 1 11.92 ? C1 L8N 302 A 1 HETATM 2 N N1 L8N . . . C 3 14.776 26.065 9.373 1 9.97 ? N1 L8N 302 A 1 HETATM 3 O O1 L8N . . . C 3 14.182 28.022 8.045 1 12.02 ? O1 L8N 302 A 1 HETATM 4 C C2 L8N . . . C 3 15.722 27.08 5.816 1 12.59 ? C2 L8N 302 A 1 HETATM 5 O O2 L8N . . . C 3 16.32 27.942 9.254 1 10.79 ? O2 L8N 302 A 1 HETATM 6 C C3 L8N . . . C 3 16.329 26.583 4.682 1 13.08 ? C3 L8N 302 A 1 HETATM 7 O O3 L8N . . . C 3 17.905 25.151 3.634 1 17.22 ? O3 L8N 302 A 1 HETATM 8 C C4 L8N . . . C 3 17.306 25.635 4.786 1 13.3 ? C4 L8N 302 A 1 HETATM 9 C C5 L8N . . . C 3 17.704 25.157 6.05 1 13.16 ? C5 L8N 302 A 1 HETATM 10 C C6 L8N . . . C 3 17.091 25.659 7.19 1 11.4 ? C6 L8N 302 A 1 HETATM 11 C C7 L8N . . . C 3 18.869 23.668 1.641 1 28.24 ? C7 L8N 302 A 1 HETATM 12 C C8 L8N . . . C 3 18.482 23.299 0.359 1 31.47 ? C8 L8N 302 A 1 HETATM 13 C C9 L8N . . . C 3 19.423 23.256 -0.663 1 34.65 ? C9 L8N 302 A 1 HETATM 14 C C10 L8N . . . C 3 20.753 23.581 -0.408 1 39.21 ? C10 L8N 302 A 1 HETATM 15 C C11 L8N . . . C 3 21.142 23.947 0.857 1 37.46 ? C11 L8N 302 A 1 HETATM 16 C C12 L8N . . . C 3 20.213 23.993 1.879 1 35.17 ? C12 L8N 302 A 1 HETATM 17 S S1 L8N . . . C 3 15.317 27.268 8.488 1 12.27 ? S1 L8N 302 A 1 HETATM 18 P P1 L8N . . . C 3 17.676 23.734 2.98 1 22.25 ? P1 L8N 302 A 1 HETATM 19 O O5 L8N . . . C 3 16.309 23.636 2.345 1 21.12 ? O5 L8N 302 A 1 HETATM 20 O O4 L8N . . . C 3 17.989 22.628 3.96 1 29.51 ? O4 L8N 302 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #