data_6SE2 # _model_server_result.job_id 6c29XYzahirNFvkJp3iitg _model_server_result.datetime_utc '2024-11-25 11:18:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6se2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6SE2 # _exptl.entry_id 6SE2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6SE2 _cell.length_a 57.935 _cell.length_b 57.935 _cell.length_c 397.468 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SE2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_444 -y-1,-x-1,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 -28.9675 -50.173182 -66.244667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 98 A ASP 98 1_555 C ZN ZN . A ZN 402 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc2 A OD2 ASP 98 A ASP 98 1_555 C ZN ZN . A ZN 402 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc3 A OD2 ASP 102 A ASP 102 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc4 A OD2 ASP 250 A ASP 250 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc5 C ZN ZN . A ZN 402 1_555 E O HOH . A HOH 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc6 C ZN ZN . A ZN 402 1_555 E O HOH . A HOH 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc7 C ZN ZN . A ZN 402 1_555 E O HOH . A HOH 571 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.893 ? metalc ? metalc8 D ZN ZN . A ZN 403 1_555 E O HOH . A HOH 505 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.479 ? metalc ? metalc9 D ZN ZN . A ZN 403 1_555 E O HOH . A HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc10 D ZN ZN . A ZN 403 1_555 E O HOH . A HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc11 D ZN ZN . A ZN 403 1_555 E O HOH . A HOH 597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc12 D ZN ZN . A ZN 403 1_555 E O HOH . A HOH 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6SE2 _atom_sites.fract_transf_matrix[1][1] 0.017261 _atom_sites.fract_transf_matrix[1][2] 0.009965 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019931 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002516 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 1 SO4 SO4 . C 3 ZN A 1 402 1 ZN ZN . D 3 ZN A 1 403 2 ZN ZN . E 4 HOH A 1 501 149 HOH HOH . E 4 HOH A 2 502 105 HOH HOH . E 4 HOH A 3 503 130 HOH HOH . E 4 HOH A 4 504 234 HOH HOH . E 4 HOH A 5 505 223 HOH HOH . E 4 HOH A 6 506 52 HOH HOH . E 4 HOH A 7 507 276 HOH HOH . E 4 HOH A 8 508 236 HOH HOH . E 4 HOH A 9 509 160 HOH HOH . E 4 HOH A 10 510 115 HOH HOH . E 4 HOH A 11 511 165 HOH HOH . E 4 HOH A 12 512 302 HOH HOH . E 4 HOH A 13 513 127 HOH HOH . E 4 HOH A 14 514 210 HOH HOH . E 4 HOH A 15 515 126 HOH HOH . E 4 HOH A 16 516 140 HOH HOH . E 4 HOH A 17 517 42 HOH HOH . E 4 HOH A 18 518 25 HOH HOH . E 4 HOH A 19 519 289 HOH HOH . E 4 HOH A 20 520 26 HOH HOH . E 4 HOH A 21 521 95 HOH HOH . E 4 HOH A 22 522 128 HOH HOH . E 4 HOH A 23 523 112 HOH HOH . E 4 HOH A 24 524 110 HOH HOH . E 4 HOH A 25 525 108 HOH HOH . E 4 HOH A 26 526 44 HOH HOH . E 4 HOH A 27 527 193 HOH HOH . E 4 HOH A 28 528 60 HOH HOH . E 4 HOH A 29 529 47 HOH HOH . E 4 HOH A 30 530 156 HOH HOH . E 4 HOH A 31 531 154 HOH HOH . E 4 HOH A 32 532 82 HOH HOH . E 4 HOH A 33 533 28 HOH HOH . E 4 HOH A 34 534 97 HOH HOH . E 4 HOH A 35 535 194 HOH HOH . E 4 HOH A 36 536 68 HOH HOH . E 4 HOH A 37 537 80 HOH HOH . E 4 HOH A 38 538 244 HOH HOH . E 4 HOH A 39 539 287 HOH HOH . E 4 HOH A 40 540 13 HOH HOH . E 4 HOH A 41 541 45 HOH HOH . E 4 HOH A 42 542 125 HOH HOH . E 4 HOH A 43 543 48 HOH HOH . E 4 HOH A 44 544 74 HOH HOH . E 4 HOH A 45 545 10 HOH HOH . E 4 HOH A 46 546 297 HOH HOH . E 4 HOH A 47 547 104 HOH HOH . E 4 HOH A 48 548 228 HOH HOH . E 4 HOH A 49 549 207 HOH HOH . E 4 HOH A 50 550 254 HOH HOH . E 4 HOH A 51 551 58 HOH HOH . E 4 HOH A 52 552 93 HOH HOH . E 4 HOH A 53 553 142 HOH HOH . E 4 HOH A 54 554 231 HOH HOH . E 4 HOH A 55 555 86 HOH HOH . E 4 HOH A 56 556 100 HOH HOH . E 4 HOH A 57 557 233 HOH HOH . E 4 HOH A 58 558 146 HOH HOH . E 4 HOH A 59 559 163 HOH HOH . E 4 HOH A 60 560 269 HOH HOH . E 4 HOH A 61 561 162 HOH HOH . E 4 HOH A 62 562 81 HOH HOH . E 4 HOH A 63 563 275 HOH HOH . E 4 HOH A 64 564 65 HOH HOH . E 4 HOH A 65 565 282 HOH HOH . E 4 HOH A 66 566 188 HOH HOH . E 4 HOH A 67 567 21 HOH HOH . E 4 HOH A 68 568 78 HOH HOH . E 4 HOH A 69 569 19 HOH HOH . E 4 HOH A 70 570 204 HOH HOH . E 4 HOH A 71 571 263 HOH HOH . E 4 HOH A 72 572 50 HOH HOH . E 4 HOH A 73 573 4 HOH HOH . E 4 HOH A 74 574 91 HOH HOH . E 4 HOH A 75 575 246 HOH HOH . E 4 HOH A 76 576 23 HOH HOH . E 4 HOH A 77 577 237 HOH HOH . E 4 HOH A 78 578 213 HOH HOH . E 4 HOH A 79 579 77 HOH HOH . E 4 HOH A 80 580 96 HOH HOH . E 4 HOH A 81 581 136 HOH HOH . E 4 HOH A 82 582 67 HOH HOH . E 4 HOH A 83 583 227 HOH HOH . E 4 HOH A 84 584 89 HOH HOH . E 4 HOH A 85 585 139 HOH HOH . E 4 HOH A 86 586 184 HOH HOH . E 4 HOH A 87 587 40 HOH HOH . E 4 HOH A 88 588 11 HOH HOH . E 4 HOH A 89 589 53 HOH HOH . E 4 HOH A 90 590 186 HOH HOH . E 4 HOH A 91 591 63 HOH HOH . E 4 HOH A 92 592 41 HOH HOH . E 4 HOH A 93 593 84 HOH HOH . E 4 HOH A 94 594 36 HOH HOH . E 4 HOH A 95 595 214 HOH HOH . E 4 HOH A 96 596 54 HOH HOH . E 4 HOH A 97 597 304 HOH HOH . E 4 HOH A 98 598 29 HOH HOH . E 4 HOH A 99 599 99 HOH HOH . E 4 HOH A 100 600 102 HOH HOH . E 4 HOH A 101 601 167 HOH HOH . E 4 HOH A 102 602 39 HOH HOH . E 4 HOH A 103 603 135 HOH HOH . E 4 HOH A 104 604 155 HOH HOH . E 4 HOH A 105 605 38 HOH HOH . E 4 HOH A 106 606 71 HOH HOH . E 4 HOH A 107 607 27 HOH HOH . E 4 HOH A 108 608 57 HOH HOH . E 4 HOH A 109 609 301 HOH HOH . E 4 HOH A 110 610 30 HOH HOH . E 4 HOH A 111 611 17 HOH HOH . E 4 HOH A 112 612 79 HOH HOH . E 4 HOH A 113 613 239 HOH HOH . E 4 HOH A 114 614 64 HOH HOH . E 4 HOH A 115 615 72 HOH HOH . E 4 HOH A 116 616 32 HOH HOH . E 4 HOH A 117 617 183 HOH HOH . E 4 HOH A 118 618 92 HOH HOH . E 4 HOH A 119 619 257 HOH HOH . E 4 HOH A 120 620 172 HOH HOH . E 4 HOH A 121 621 8 HOH HOH . E 4 HOH A 122 622 221 HOH HOH . E 4 HOH A 123 623 144 HOH HOH . E 4 HOH A 124 624 51 HOH HOH . E 4 HOH A 125 625 151 HOH HOH . E 4 HOH A 126 626 189 HOH HOH . E 4 HOH A 127 627 206 HOH HOH . E 4 HOH A 128 628 12 HOH HOH . E 4 HOH A 129 629 187 HOH HOH . E 4 HOH A 130 630 174 HOH HOH . E 4 HOH A 131 631 61 HOH HOH . E 4 HOH A 132 632 205 HOH HOH . E 4 HOH A 133 633 59 HOH HOH . E 4 HOH A 134 634 117 HOH HOH . E 4 HOH A 135 635 15 HOH HOH . E 4 HOH A 136 636 226 HOH HOH . E 4 HOH A 137 637 230 HOH HOH . E 4 HOH A 138 638 6 HOH HOH . E 4 HOH A 139 639 20 HOH HOH . E 4 HOH A 140 640 177 HOH HOH . E 4 HOH A 141 641 111 HOH HOH . E 4 HOH A 142 642 211 HOH HOH . E 4 HOH A 143 643 43 HOH HOH . E 4 HOH A 144 644 34 HOH HOH . E 4 HOH A 145 645 222 HOH HOH . E 4 HOH A 146 646 285 HOH HOH . E 4 HOH A 147 647 182 HOH HOH . E 4 HOH A 148 648 18 HOH HOH . E 4 HOH A 149 649 116 HOH HOH . E 4 HOH A 150 650 75 HOH HOH . E 4 HOH A 151 651 101 HOH HOH . E 4 HOH A 152 652 176 HOH HOH . E 4 HOH A 153 653 122 HOH HOH . E 4 HOH A 154 654 180 HOH HOH . E 4 HOH A 155 655 37 HOH HOH . E 4 HOH A 156 656 240 HOH HOH . E 4 HOH A 157 657 137 HOH HOH . E 4 HOH A 158 658 98 HOH HOH . E 4 HOH A 159 659 252 HOH HOH . E 4 HOH A 160 660 255 HOH HOH . E 4 HOH A 161 661 49 HOH HOH . E 4 HOH A 162 662 83 HOH HOH . E 4 HOH A 163 663 153 HOH HOH . E 4 HOH A 164 664 198 HOH HOH . E 4 HOH A 165 665 22 HOH HOH . E 4 HOH A 166 666 106 HOH HOH . E 4 HOH A 167 667 232 HOH HOH . E 4 HOH A 168 668 215 HOH HOH . E 4 HOH A 169 669 216 HOH HOH . E 4 HOH A 170 670 159 HOH HOH . E 4 HOH A 171 671 208 HOH HOH . E 4 HOH A 172 672 158 HOH HOH . E 4 HOH A 173 673 131 HOH HOH . E 4 HOH A 174 674 238 HOH HOH . E 4 HOH A 175 675 107 HOH HOH . E 4 HOH A 176 676 250 HOH HOH . E 4 HOH A 177 677 259 HOH HOH . E 4 HOH A 178 678 14 HOH HOH . E 4 HOH A 179 679 7 HOH HOH . E 4 HOH A 180 680 114 HOH HOH . E 4 HOH A 181 681 284 HOH HOH . E 4 HOH A 182 682 260 HOH HOH . E 4 HOH A 183 683 69 HOH HOH . E 4 HOH A 184 684 70 HOH HOH . E 4 HOH A 185 685 161 HOH HOH . E 4 HOH A 186 686 178 HOH HOH . E 4 HOH A 187 687 298 HOH HOH . E 4 HOH A 188 688 94 HOH HOH . E 4 HOH A 189 689 157 HOH HOH . E 4 HOH A 190 690 190 HOH HOH . E 4 HOH A 191 691 147 HOH HOH . E 4 HOH A 192 692 16 HOH HOH . E 4 HOH A 193 693 171 HOH HOH . E 4 HOH A 194 694 33 HOH HOH . E 4 HOH A 195 695 35 HOH HOH . E 4 HOH A 196 696 5 HOH HOH . E 4 HOH A 197 697 273 HOH HOH . E 4 HOH A 198 698 242 HOH HOH . E 4 HOH A 199 699 31 HOH HOH . E 4 HOH A 200 700 220 HOH HOH . E 4 HOH A 201 701 113 HOH HOH . E 4 HOH A 202 702 87 HOH HOH . E 4 HOH A 203 703 294 HOH HOH . E 4 HOH A 204 704 145 HOH HOH . E 4 HOH A 205 705 264 HOH HOH . E 4 HOH A 206 706 266 HOH HOH . E 4 HOH A 207 707 90 HOH HOH . E 4 HOH A 208 708 85 HOH HOH . E 4 HOH A 209 709 243 HOH HOH . E 4 HOH A 210 710 9 HOH HOH . E 4 HOH A 211 711 185 HOH HOH . E 4 HOH A 212 712 201 HOH HOH . E 4 HOH A 213 713 225 HOH HOH . E 4 HOH A 214 714 138 HOH HOH . E 4 HOH A 215 715 134 HOH HOH . E 4 HOH A 216 716 245 HOH HOH . E 4 HOH A 217 717 253 HOH HOH . E 4 HOH A 218 718 150 HOH HOH . E 4 HOH A 219 719 103 HOH HOH . E 4 HOH A 220 720 203 HOH HOH . E 4 HOH A 221 721 124 HOH HOH . E 4 HOH A 222 722 24 HOH HOH . E 4 HOH A 223 723 179 HOH HOH . E 4 HOH A 224 724 278 HOH HOH . E 4 HOH A 225 725 235 HOH HOH . E 4 HOH A 226 726 132 HOH HOH . E 4 HOH A 227 727 271 HOH HOH . E 4 HOH A 228 728 295 HOH HOH . E 4 HOH A 229 729 46 HOH HOH . E 4 HOH A 230 730 195 HOH HOH . E 4 HOH A 231 731 141 HOH HOH . E 4 HOH A 232 732 300 HOH HOH . E 4 HOH A 233 733 224 HOH HOH . E 4 HOH A 234 734 202 HOH HOH . E 4 HOH A 235 735 62 HOH HOH . E 4 HOH A 236 736 212 HOH HOH . E 4 HOH A 237 737 279 HOH HOH . E 4 HOH A 238 738 121 HOH HOH . E 4 HOH A 239 739 265 HOH HOH . E 4 HOH A 240 740 168 HOH HOH . E 4 HOH A 241 741 118 HOH HOH . E 4 HOH A 242 742 109 HOH HOH . E 4 HOH A 243 743 55 HOH HOH . E 4 HOH A 244 744 133 HOH HOH . E 4 HOH A 245 745 299 HOH HOH . E 4 HOH A 246 746 169 HOH HOH . E 4 HOH A 247 747 175 HOH HOH . E 4 HOH A 248 748 192 HOH HOH . E 4 HOH A 249 749 173 HOH HOH . E 4 HOH A 250 750 88 HOH HOH . E 4 HOH A 251 751 56 HOH HOH . E 4 HOH A 252 752 120 HOH HOH . E 4 HOH A 253 753 283 HOH HOH . E 4 HOH A 254 754 229 HOH HOH . E 4 HOH A 255 755 119 HOH HOH . E 4 HOH A 256 756 191 HOH HOH . E 4 HOH A 257 757 66 HOH HOH . E 4 HOH A 258 758 199 HOH HOH . E 4 HOH A 259 759 148 HOH HOH . E 4 HOH A 260 760 218 HOH HOH . E 4 HOH A 261 761 200 HOH HOH . E 4 HOH A 262 762 76 HOH HOH . E 4 HOH A 263 763 270 HOH HOH . E 4 HOH A 264 764 272 HOH HOH . E 4 HOH A 265 765 166 HOH HOH . E 4 HOH A 266 766 303 HOH HOH . E 4 HOH A 267 767 241 HOH HOH . E 4 HOH A 268 768 217 HOH HOH . E 4 HOH A 269 769 290 HOH HOH . E 4 HOH A 270 770 143 HOH HOH . E 4 HOH A 271 771 196 HOH HOH . E 4 HOH A 272 772 281 HOH HOH . E 4 HOH A 273 773 261 HOH HOH . E 4 HOH A 274 774 296 HOH HOH . E 4 HOH A 275 775 247 HOH HOH . E 4 HOH A 276 776 267 HOH HOH . E 4 HOH A 277 777 123 HOH HOH . E 4 HOH A 278 778 249 HOH HOH . E 4 HOH A 279 779 164 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -17.614 _atom_site.Cartn_y -12.655 _atom_site.Cartn_z -15.91 _atom_site.occupancy 0.43 _atom_site.B_iso_or_equiv 23.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #