data_6SEX # _model_server_result.job_id p5yQOuwlbzwdjJvDCXN9nw _model_server_result.datetime_utc '2024-12-22 11:30:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sex # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":211}' # _entry.id 6SEX # _exptl.entry_id 6SEX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SEX _cell.length_a 76.735 _cell.length_b 76.735 _cell.length_c 38.981 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SEX _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 H N N ? 2 J N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc1 A ND1 HIS 15 A HIS 15 1_555 N AU AU . A AU 213 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.677 ? metalc ? metalc2 A ND1 HIS 15 A HIS 15 1_555 N AU AU . A AU 213 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.287 ? metalc ? metalc3 A NE2 HIS 15 A HIS 15 1_555 O AU AU . A AU 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc4 A OD1 ASN 93 A ASN 93 1_555 N AU AU . A AU 213 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.71 ? metalc ? metalc5 A SD MET 105 A MET 105 1_555 M AU AU . A AU 212 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.511 ? metalc ? metalc6 M AU AU . A AU 212 1_555 P O HOH . A HOH 459 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.332 ? metalc ? metalc7 N AU AU . A AU 213 1_555 P O HOH . A HOH 443 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.943 ? metalc ? metalc8 O AU AU . A AU 214 1_555 P O HOH . A HOH 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 261 n n N O2 NO3 sing 262 n n N O3 NO3 sing 263 n n # _atom_sites.entry_id 6SEX _atom_sites.fract_transf_matrix[1][1] 0.013032 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013032 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025654 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 201 405 NO3 NO3 . C 2 NO3 A 1 202 406 NO3 NO3 . D 2 NO3 A 1 203 407 NO3 NO3 . E 2 NO3 A 1 204 501 NO3 NO3 . F 2 NO3 A 1 205 601 NO3 NO3 . G 3 ACT A 1 206 701 ACT ACT . H 2 NO3 A 1 207 801 NO3 NO3 . I 4 DMS A 1 208 901 DMS DMS . J 2 NO3 A 1 209 1001 NO3 NO3 . K 5 EDO A 1 210 1101 EDO EDO . L 2 NO3 A 1 211 1201 NO3 NO3 . M 6 AU A 1 212 1 AU AU . N 6 AU A 1 213 2 AU AU . O 6 AU A 1 214 3 AU AU . P 7 HOH A 1 301 3 HOH HOH . P 7 HOH A 2 302 38 HOH HOH . P 7 HOH A 3 303 148 HOH HOH . P 7 HOH A 4 304 121 HOH HOH . P 7 HOH A 5 305 70 HOH HOH . P 7 HOH A 6 306 91 HOH HOH . P 7 HOH A 7 307 89 HOH HOH . P 7 HOH A 8 308 10 HOH HOH . P 7 HOH A 9 309 7 HOH HOH . P 7 HOH A 10 310 183 HOH HOH . P 7 HOH A 11 311 64 HOH HOH . P 7 HOH A 12 312 186 HOH HOH . P 7 HOH A 13 313 79 HOH HOH . P 7 HOH A 14 314 180 HOH HOH . P 7 HOH A 15 315 123 HOH HOH . P 7 HOH A 16 316 46 HOH HOH . P 7 HOH A 17 317 57 HOH HOH . P 7 HOH A 18 318 198 HOH HOH . P 7 HOH A 19 319 132 HOH HOH . P 7 HOH A 20 320 120 HOH HOH . P 7 HOH A 21 321 20 HOH HOH . P 7 HOH A 22 322 17 HOH HOH . P 7 HOH A 23 323 112 HOH HOH . P 7 HOH A 24 324 147 HOH HOH . P 7 HOH A 25 325 33 HOH HOH . P 7 HOH A 26 326 28 HOH HOH . P 7 HOH A 27 327 155 HOH HOH . P 7 HOH A 28 328 90 HOH HOH . P 7 HOH A 29 329 49 HOH HOH . P 7 HOH A 30 330 86 HOH HOH . P 7 HOH A 31 331 138 HOH HOH . P 7 HOH A 32 332 47 HOH HOH . P 7 HOH A 33 333 192 HOH HOH . P 7 HOH A 34 334 14 HOH HOH . P 7 HOH A 35 335 100 HOH HOH . P 7 HOH A 36 336 62 HOH HOH . P 7 HOH A 37 337 193 HOH HOH . P 7 HOH A 38 338 99 HOH HOH . P 7 HOH A 39 339 160 HOH HOH . P 7 HOH A 40 340 128 HOH HOH . P 7 HOH A 41 341 167 HOH HOH . P 7 HOH A 42 342 146 HOH HOH . P 7 HOH A 43 343 9 HOH HOH . P 7 HOH A 44 344 2 HOH HOH . P 7 HOH A 45 345 118 HOH HOH . P 7 HOH A 46 346 127 HOH HOH . P 7 HOH A 47 347 18 HOH HOH . P 7 HOH A 48 348 108 HOH HOH . P 7 HOH A 49 349 137 HOH HOH . P 7 HOH A 50 350 171 HOH HOH . P 7 HOH A 51 351 15 HOH HOH . P 7 HOH A 52 352 56 HOH HOH . P 7 HOH A 53 353 143 HOH HOH . P 7 HOH A 54 354 44 HOH HOH . P 7 HOH A 55 355 103 HOH HOH . P 7 HOH A 56 356 195 HOH HOH . P 7 HOH A 57 357 109 HOH HOH . P 7 HOH A 58 358 69 HOH HOH . P 7 HOH A 59 359 63 HOH HOH . P 7 HOH A 60 360 172 HOH HOH . P 7 HOH A 61 361 134 HOH HOH . P 7 HOH A 62 362 113 HOH HOH . P 7 HOH A 63 363 59 HOH HOH . P 7 HOH A 64 364 66 HOH HOH . P 7 HOH A 65 365 6 HOH HOH . P 7 HOH A 66 366 24 HOH HOH . P 7 HOH A 67 367 23 HOH HOH . P 7 HOH A 68 368 125 HOH HOH . P 7 HOH A 69 369 68 HOH HOH . P 7 HOH A 70 370 51 HOH HOH . P 7 HOH A 71 371 129 HOH HOH . P 7 HOH A 72 372 196 HOH HOH . P 7 HOH A 73 373 72 HOH HOH . P 7 HOH A 74 374 184 HOH HOH . P 7 HOH A 75 375 106 HOH HOH . P 7 HOH A 76 376 35 HOH HOH . P 7 HOH A 77 377 12 HOH HOH . P 7 HOH A 78 378 39 HOH HOH . P 7 HOH A 79 379 76 HOH HOH . P 7 HOH A 80 380 31 HOH HOH . P 7 HOH A 81 381 105 HOH HOH . P 7 HOH A 82 382 48 HOH HOH . P 7 HOH A 83 383 122 HOH HOH . P 7 HOH A 84 384 13 HOH HOH . P 7 HOH A 85 385 190 HOH HOH . P 7 HOH A 86 386 115 HOH HOH . P 7 HOH A 87 387 5 HOH HOH . P 7 HOH A 88 388 154 HOH HOH . P 7 HOH A 89 389 189 HOH HOH . P 7 HOH A 90 390 58 HOH HOH . P 7 HOH A 91 391 67 HOH HOH . P 7 HOH A 92 392 92 HOH HOH . P 7 HOH A 93 393 133 HOH HOH . P 7 HOH A 94 394 16 HOH HOH . P 7 HOH A 95 395 185 HOH HOH . P 7 HOH A 96 396 140 HOH HOH . P 7 HOH A 97 397 65 HOH HOH . P 7 HOH A 98 398 110 HOH HOH . P 7 HOH A 99 399 179 HOH HOH . P 7 HOH A 100 400 161 HOH HOH . P 7 HOH A 101 401 30 HOH HOH . P 7 HOH A 102 402 60 HOH HOH . P 7 HOH A 103 403 37 HOH HOH . P 7 HOH A 104 404 45 HOH HOH . P 7 HOH A 105 405 139 HOH HOH . P 7 HOH A 106 406 27 HOH HOH . P 7 HOH A 107 407 135 HOH HOH . P 7 HOH A 108 408 159 HOH HOH . P 7 HOH A 109 409 34 HOH HOH . P 7 HOH A 110 410 177 HOH HOH . P 7 HOH A 111 411 162 HOH HOH . P 7 HOH A 112 412 94 HOH HOH . P 7 HOH A 113 413 54 HOH HOH . P 7 HOH A 114 414 26 HOH HOH . P 7 HOH A 115 415 75 HOH HOH . P 7 HOH A 116 416 182 HOH HOH . P 7 HOH A 117 417 25 HOH HOH . P 7 HOH A 118 418 175 HOH HOH . P 7 HOH A 119 419 136 HOH HOH . P 7 HOH A 120 420 141 HOH HOH . P 7 HOH A 121 421 40 HOH HOH . P 7 HOH A 122 422 43 HOH HOH . P 7 HOH A 123 423 187 HOH HOH . P 7 HOH A 124 424 126 HOH HOH . P 7 HOH A 125 425 53 HOH HOH . P 7 HOH A 126 426 78 HOH HOH . P 7 HOH A 127 427 116 HOH HOH . P 7 HOH A 128 428 142 HOH HOH . P 7 HOH A 129 429 176 HOH HOH . P 7 HOH A 130 430 119 HOH HOH . P 7 HOH A 131 431 151 HOH HOH . P 7 HOH A 132 432 50 HOH HOH . P 7 HOH A 133 433 191 HOH HOH . P 7 HOH A 134 434 124 HOH HOH . P 7 HOH A 135 435 4 HOH HOH . P 7 HOH A 136 436 55 HOH HOH . P 7 HOH A 137 437 73 HOH HOH . P 7 HOH A 138 438 153 HOH HOH . P 7 HOH A 139 439 52 HOH HOH . P 7 HOH A 140 440 156 HOH HOH . P 7 HOH A 141 441 22 HOH HOH . P 7 HOH A 142 442 74 HOH HOH . P 7 HOH A 143 443 157 HOH HOH . P 7 HOH A 144 444 36 HOH HOH . P 7 HOH A 145 445 84 HOH HOH . P 7 HOH A 146 446 88 HOH HOH . P 7 HOH A 147 447 85 HOH HOH . P 7 HOH A 148 448 197 HOH HOH . P 7 HOH A 149 449 32 HOH HOH . P 7 HOH A 150 450 158 HOH HOH . P 7 HOH A 151 451 80 HOH HOH . P 7 HOH A 152 452 131 HOH HOH . P 7 HOH A 153 453 199 HOH HOH . P 7 HOH A 154 454 107 HOH HOH . P 7 HOH A 155 455 188 HOH HOH . P 7 HOH A 156 456 41 HOH HOH . P 7 HOH A 157 457 77 HOH HOH . P 7 HOH A 158 458 96 HOH HOH . P 7 HOH A 159 459 5 HOH HOH . P 7 HOH A 160 460 130 HOH HOH . P 7 HOH A 161 461 111 HOH HOH . P 7 HOH A 162 462 101 HOH HOH . P 7 HOH A 163 463 149 HOH HOH . P 7 HOH A 164 464 170 HOH HOH . P 7 HOH A 165 465 164 HOH HOH . P 7 HOH A 166 466 150 HOH HOH . P 7 HOH A 167 467 173 HOH HOH . P 7 HOH A 168 468 168 HOH HOH . P 7 HOH A 169 469 93 HOH HOH . P 7 HOH A 170 470 117 HOH HOH . P 7 HOH A 171 471 144 HOH HOH . P 7 HOH A 172 472 83 HOH HOH . P 7 HOH A 173 473 200 HOH HOH . P 7 HOH A 174 474 166 HOH HOH . P 7 HOH A 175 475 152 HOH HOH . P 7 HOH A 176 476 81 HOH HOH . P 7 HOH A 177 477 194 HOH HOH . P 7 HOH A 178 478 104 HOH HOH . P 7 HOH A 179 479 145 HOH HOH . P 7 HOH A 180 480 102 HOH HOH . P 7 HOH A 181 481 114 HOH HOH . P 7 HOH A 182 482 169 HOH HOH . P 7 HOH A 183 483 95 HOH HOH . P 7 HOH A 184 484 178 HOH HOH . P 7 HOH A 185 485 61 HOH HOH . P 7 HOH A 186 486 165 HOH HOH . P 7 HOH A 187 487 163 HOH HOH . P 7 HOH A 188 488 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . L 2 -29.306 2.488 -0.234 1 59.16 ? N NO3 211 A 1 HETATM 2 O O1 NO3 . . . L 2 -28.141 2.494 0.173 1 53.8 ? O1 NO3 211 A 1 HETATM 3 O O2 NO3 . . . L 2 -30.118 1.371 0 1 52.11 ? O2 NO3 211 A 1 HETATM 4 O O3 NO3 . . . L 2 -29.846 3.596 -0.927 1 56.09 ? O3 NO3 211 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #