data_6SF0
#
_model_server_result.job_id            O3X4_jxgp4rUvQKI7LZfeg 
_model_server_result.datetime_utc      '2025-08-31 12:18:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sf0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":602}' 
#
_entry.id    6SF0 
#
_exptl.entry_id    6SF0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.08 
_cell.angle_gamma         90 
_cell.entry_id            6SF0 
_cell.length_a            153.75 
_cell.length_b            148.678 
_cell.length_c            139.119 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SF0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,K,L,M,N,Q 1 1 
B,G,H,O 2 1 
C,I,J,P 2 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -76.875 74.339 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 409 n n 
PA O2A NAP sing 410 n n 
PA O5B NAP sing 411 n n 
PA O3 NAP sing 412 n n 
O2A HOA2 NAP sing 413 n n 
O5B C5B NAP sing 414 n n 
C5B C4B NAP sing 415 n n 
C5B H51A NAP sing 416 n n 
C5B H52A NAP sing 417 n n 
C4B O4B NAP sing 418 n n 
C4B C3B NAP sing 419 n n 
C4B H4B NAP sing 420 n n 
O4B C1B NAP sing 421 n n 
C3B O3B NAP sing 422 n n 
C3B C2B NAP sing 423 n n 
C3B H3B NAP sing 424 n n 
O3B HO3A NAP sing 425 n n 
C2B O2B NAP sing 426 n n 
C2B C1B NAP sing 427 n n 
C2B H2B NAP sing 428 n n 
O2B P2B NAP sing 429 n n 
C1B N9A NAP sing 430 n n 
C1B H1B NAP sing 431 n n 
N9A C8A NAP sing 432 n y 
N9A C4A NAP sing 433 n y 
C8A N7A NAP doub 434 n y 
C8A H8A NAP sing 435 n n 
N7A C5A NAP sing 436 n y 
C5A C6A NAP sing 437 n y 
C5A C4A NAP doub 438 n y 
C6A N6A NAP sing 439 n n 
C6A N1A NAP doub 440 n y 
N6A H61A NAP sing 441 n n 
N6A H62A NAP sing 442 n n 
N1A C2A NAP sing 443 n y 
C2A N3A NAP doub 444 n y 
C2A H2A NAP sing 445 n n 
N3A C4A NAP sing 446 n y 
O3 PN NAP sing 447 n n 
PN O1N NAP doub 448 n n 
PN O2N NAP sing 449 n n 
PN O5D NAP sing 450 n n 
O5D C5D NAP sing 451 n n 
C5D C4D NAP sing 452 n n 
C5D H51N NAP sing 453 n n 
C5D H52N NAP sing 454 n n 
C4D O4D NAP sing 455 n n 
C4D C3D NAP sing 456 n n 
C4D H4D NAP sing 457 n n 
O4D C1D NAP sing 458 n n 
C3D O3D NAP sing 459 n n 
C3D C2D NAP sing 460 n n 
C3D H3D NAP sing 461 n n 
O3D HO3N NAP sing 462 n n 
C2D O2D NAP sing 463 n n 
C2D C1D NAP sing 464 n n 
C2D H2D NAP sing 465 n n 
O2D HO2N NAP sing 466 n n 
C1D N1N NAP sing 467 n n 
C1D H1D NAP sing 468 n n 
N1N C2N NAP sing 469 n y 
N1N C6N NAP doub 470 n y 
C2N C3N NAP doub 471 n y 
C2N H2N NAP sing 472 n n 
C3N C7N NAP sing 473 n n 
C3N C4N NAP sing 474 n y 
C7N O7N NAP doub 475 n n 
C7N N7N NAP sing 476 n n 
N7N H71N NAP sing 477 n n 
N7N H72N NAP sing 478 n n 
C4N C5N NAP doub 479 n y 
C4N H4N NAP sing 480 n n 
C5N C6N NAP sing 481 n y 
C5N H5N NAP sing 482 n n 
C6N H6N NAP sing 483 n n 
P2B O1X NAP doub 484 n n 
P2B O2X NAP sing 485 n n 
P2B O3X NAP sing 486 n n 
O2X HOP2 NAP sing 487 n n 
O3X HOP3 NAP sing 488 n n 
#
_atom_sites.entry_id                     6SF0 
_atom_sites.fract_transf_matrix[1][1]    0.006504 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000808 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006726 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007243 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD B 1 601 601 FAD FAD . 
F 3 NAP B 1 602 701 NAP NAP . 
G 2 FAD A 1 601 601 FAD FAD . 
H 3 NAP A 1 602 701 NAP NAP . 
I 2 FAD C 1 601 601 FAD FAD . 
J 3 NAP C 1 602 701 NAP NAP . 
K 2 FAD D 1 601 601 FAD FAD . 
L 3 NAP D 1 602 701 NAP NAP . 
M 4 MA4 D 1 603 1 MA4 CM5 . 
N 5 HOH B 1 701 43 HOH HOH . 
N 5 HOH B 2 702 77 HOH HOH . 
N 5 HOH B 3 703 4 HOH HOH . 
N 5 HOH B 4 704 32 HOH HOH . 
N 5 HOH B 5 705 12 HOH HOH . 
N 5 HOH B 6 706 8 HOH HOH . 
N 5 HOH B 7 707 1 HOH HOH . 
N 5 HOH B 8 708 49 HOH HOH . 
N 5 HOH B 9 709 10 HOH HOH . 
N 5 HOH B 10 710 41 HOH HOH . 
N 5 HOH B 11 711 18 HOH HOH . 
N 5 HOH B 12 712 14 HOH HOH . 
O 5 HOH A 1 701 46 HOH HOH . 
O 5 HOH A 2 702 36 HOH HOH . 
O 5 HOH A 3 703 22 HOH HOH . 
O 5 HOH A 4 704 55 HOH HOH . 
O 5 HOH A 5 705 38 HOH HOH . 
O 5 HOH A 6 706 67 HOH HOH . 
O 5 HOH A 7 707 48 HOH HOH . 
O 5 HOH A 8 708 56 HOH HOH . 
O 5 HOH A 9 709 9 HOH HOH . 
O 5 HOH A 10 710 44 HOH HOH . 
P 5 HOH C 1 701 54 HOH HOH . 
P 5 HOH C 2 702 16 HOH HOH . 
P 5 HOH C 3 703 27 HOH HOH . 
P 5 HOH C 4 704 52 HOH HOH . 
P 5 HOH C 5 705 31 HOH HOH . 
P 5 HOH C 6 706 45 HOH HOH . 
P 5 HOH C 7 707 34 HOH HOH . 
P 5 HOH C 8 708 57 HOH HOH . 
Q 5 HOH D 1 701 13 HOH HOH . 
Q 5 HOH D 2 702 30 HOH HOH . 
Q 5 HOH D 3 703 28 HOH HOH . 
Q 5 HOH D 4 704 51 HOH HOH . 
Q 5 HOH D 5 705 21 HOH HOH . 
Q 5 HOH D 6 706 71 HOH HOH . 
Q 5 HOH D 7 707 33 HOH HOH . 
Q 5 HOH D 8 708 53 HOH HOH . 
Q 5 HOH D 9 709 39 HOH HOH . 
Q 5 HOH D 10 710 20 HOH HOH . 
Q 5 HOH D 11 711 61 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . J 3 -17.904 -73.955 33.113 1 51.94 ? PA NAP 602 C 1 
HETATM 2 O O1A NAP . . . J 3 -18.052 -72.499 33.502 1 48.66 ? O1A NAP 602 C 1 
HETATM 3 O O2A NAP . . . J 3 -18.395 -75.104 33.978 1 55.24 ? O2A NAP 602 C 1 
HETATM 4 O O5B NAP . . . J 3 -16.332 -74.21 33 1 53.45 ? O5B NAP 602 C 1 
HETATM 5 C C5B NAP . . . J 3 -15.422 -73.477 32.165 1 59.28 ? C5B NAP 602 C 1 
HETATM 6 C C4B NAP . . . J 3 -13.983 -74.001 32.309 1 59.51 ? C4B NAP 602 C 1 
HETATM 7 O O4B NAP . . . J 3 -13.108 -73.378 31.374 1 59.79 ? O4B NAP 602 C 1 
HETATM 8 C C3B NAP . . . J 3 -13.413 -73.708 33.693 1 58.11 ? C3B NAP 602 C 1 
HETATM 9 O O3B NAP . . . J 3 -12.596 -74.833 34.078 1 54.29 ? O3B NAP 602 C 1 
HETATM 10 C C2B NAP . . . J 3 -12.68 -72.415 33.477 1 57.92 ? C2B NAP 602 C 1 
HETATM 11 O O2B NAP . . . J 3 -11.682 -72.139 34.466 1 71.27 ? O2B NAP 602 C 1 
HETATM 12 C C1B NAP . . . J 3 -12.089 -72.785 32.136 1 62.21 ? C1B NAP 602 C 1 
HETATM 13 N N9A NAP . . . J 3 -11.508 -71.591 31.559 1 71.77 ? N9A NAP 602 C 1 
HETATM 14 C C8A NAP . . . J 3 -12.066 -70.365 31.431 1 79.17 ? C8A NAP 602 C 1 
HETATM 15 N N7A NAP . . . J 3 -11.15 -69.5 30.907 1 85.32 ? N7A NAP 602 C 1 
HETATM 16 C C5A NAP . . . J 3 -10.005 -70.197 30.725 1 85.81 ? C5A NAP 602 C 1 
HETATM 17 C C6A NAP . . . J 3 -8.645 -69.911 30.22 1 88.89 ? C6A NAP 602 C 1 
HETATM 18 N N6A NAP . . . J 3 -8.376 -68.654 29.795 1 92.97 ? N6A NAP 602 C 1 
HETATM 19 N N1A NAP . . . J 3 -7.723 -70.923 30.191 1 89.64 ? N1A NAP 602 C 1 
HETATM 20 C C2A NAP . . . J 3 -8.016 -72.172 30.628 1 89.92 ? C2A NAP 602 C 1 
HETATM 21 N N3A NAP . . . J 3 -9.242 -72.503 31.108 1 83.27 ? N3A NAP 602 C 1 
HETATM 22 C C4A NAP . . . J 3 -10.245 -71.578 31.166 1 80.57 ? C4A NAP 602 C 1 
HETATM 23 O O3 NAP . . . J 3 -18.53 -74.256 31.642 1 49.76 ? O3 NAP 602 C 1 
HETATM 24 P PN NAP . . . J 3 -18.911 -75.766 31.201 1 51.99 ? PN NAP 602 C 1 
HETATM 25 O O1N NAP . . . J 3 -17.744 -76.703 31.507 1 50.36 ? O1N NAP 602 C 1 
HETATM 26 O O2N NAP . . . J 3 -19.408 -75.729 29.773 1 50.68 ? O2N NAP 602 C 1 
HETATM 27 O O5D NAP . . . J 3 -20.106 -76.149 32.233 1 51.89 ? O5D NAP 602 C 1 
HETATM 28 C C5D NAP . . . J 3 -21.43 -75.572 32.211 1 55.59 ? C5D NAP 602 C 1 
HETATM 29 C C4D NAP . . . J 3 -22.344 -76 33.386 1 58.29 ? C4D NAP 602 C 1 
HETATM 30 O O4D NAP . . . J 3 -23.187 -77.157 33.147 1 53.3 ? O4D NAP 602 C 1 
HETATM 31 C C3D NAP . . . J 3 -21.545 -76.375 34.617 1 62.36 ? C3D NAP 602 C 1 
HETATM 32 O O3D NAP . . . J 3 -22.328 -76.182 35.798 1 63.28 ? O3D NAP 602 C 1 
HETATM 33 C C2D NAP . . . J 3 -21.321 -77.851 34.401 1 63.92 ? C2D NAP 602 C 1 
HETATM 34 O O2D NAP . . . J 3 -20.806 -78.477 35.592 1 69.07 ? O2D NAP 602 C 1 
HETATM 35 C C1D NAP . . . J 3 -22.695 -78.301 33.858 1 57.84 ? C1D NAP 602 C 1 
HETATM 36 N N1N NAP . . . J 3 -22.522 -79.454 32.952 1 59.13 ? N1N NAP 602 C 1 
HETATM 37 C C2N NAP . . . J 3 -22.883 -80.697 33.299 1 64.07 ? C2N NAP 602 C 1 
HETATM 38 C C3N NAP . . . J 3 -22.678 -81.773 32.419 1 66.69 ? C3N NAP 602 C 1 
HETATM 39 C C7N NAP . . . J 3 -23.049 -83.186 32.762 1 70.62 ? C7N NAP 602 C 1 
HETATM 40 O O7N NAP . . . J 3 -22.236 -84.053 32.498 1 70.03 ? O7N NAP 602 C 1 
HETATM 41 N N7N NAP . . . J 3 -24.213 -83.479 33.339 1 74.34 ? N7N NAP 602 C 1 
HETATM 42 C C4N NAP . . . J 3 -22.101 -81.57 31.182 1 62.72 ? C4N NAP 602 C 1 
HETATM 43 C C5N NAP . . . J 3 -21.711 -80.301 30.853 1 58.26 ? C5N NAP 602 C 1 
HETATM 44 C C6N NAP . . . J 3 -21.942 -79.267 31.757 1 60.73 ? C6N NAP 602 C 1 
HETATM 45 P P2B NAP . . . J 3 -11.303 -70.689 35.14 1 89.49 ? P2B NAP 602 C 1 
HETATM 46 O O1X NAP . . . J 3 -10.888 -71.04 36.565 1 73.78 ? O1X NAP 602 C 1 
HETATM 47 O O2X NAP . . . J 3 -10.072 -70.047 34.502 1 76.93 ? O2X NAP 602 C 1 
HETATM 48 O O3X NAP . . . J 3 -12.588 -69.88 34.882 1 88.19 ? O3X NAP 602 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           390 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           48 
#