data_6SG2 # _model_server_result.job_id fgdNkVwGUjvwyHBu3jR_tA _model_server_result.datetime_utc '2025-03-12 20:49:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sg2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 6SG2 # _exptl.entry_id 6SG2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SG2 _cell.length_a 49.34 _cell.length_b 86.82 _cell.length_c 88.17 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SG2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 34 AAA CYS 35 1_555 E FE2 SF4 . AAA SF4 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc2 A SG CYS 37 AAA CYS 38 1_555 E FE4 SF4 . AAA SF4 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc3 A SG CYS 40 AAA CYS 41 1_555 E FE3 SF4 . AAA SF4 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc4 A SG CYS 44 AAA CYS 45 1_555 D FE3 SF4 . AAA SF4 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc5 A SG CYS 65 AAA CYS 66 1_555 D FE1 SF4 . AAA SF4 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc6 A SG CYS 68 AAA CYS 69 1_555 D FE4 SF4 . AAA SF4 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc7 A SG CYS 71 AAA CYS 72 1_555 D FE2 SF4 . AAA SF4 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc8 A SG CYS 75 AAA CYS 76 1_555 E FE1 SF4 . AAA SF4 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc9 A SG CYS 178 AAA CYS 179 1_555 C FE4 SF4 . AAA SF4 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc10 A SG CYS 233 AAA CYS 234 1_555 C FE1 SF4 . AAA SF4 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc11 A SG CYS 377 AAA CYS 378 1_555 C FE3 SF4 . AAA SF4 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc12 A SG CYS 381 AAA CYS 382 1_555 C FE2 SF4 . AAA SF4 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc13 A SG CYS 381 AAA CYS 382 1_555 F FE1 LFH . AAA LFH 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 315 n n FE1 S3 SF4 sing 316 n n FE1 S4 SF4 sing 317 n n FE2 S1 SF4 sing 318 n n FE2 S3 SF4 sing 319 n n FE2 S4 SF4 sing 320 n n FE3 S1 SF4 sing 321 n n FE3 S2 SF4 sing 322 n n FE3 S4 SF4 sing 323 n n FE4 S1 SF4 sing 324 n n FE4 S2 SF4 sing 325 n n FE4 S3 SF4 sing 326 n n # _atom_sites.entry_id 6SG2 _atom_sites.fract_transf_matrix[1][1] 0.020268 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011518 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011342 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SF4 AAA 1 1001 1001 SF4 SF4 . D 3 SF4 AAA 1 1002 1101 SF4 SF4 . E 3 SF4 AAA 1 1003 1201 SF4 SF4 . F 4 LFH AAA 1 1004 1301 LFH 402 . G 5 HOH AAA 1 1101 68 HOH HOH . G 5 HOH AAA 2 1102 21 HOH HOH . G 5 HOH AAA 3 1103 127 HOH HOH . G 5 HOH AAA 4 1104 103 HOH HOH . G 5 HOH AAA 5 1105 113 HOH HOH . G 5 HOH AAA 6 1106 114 HOH HOH . G 5 HOH AAA 7 1107 97 HOH HOH . G 5 HOH AAA 8 1108 96 HOH HOH . G 5 HOH AAA 9 1109 117 HOH HOH . G 5 HOH AAA 10 1110 46 HOH HOH . G 5 HOH AAA 11 1111 91 HOH HOH . G 5 HOH AAA 12 1112 110 HOH HOH . G 5 HOH AAA 13 1113 65 HOH HOH . G 5 HOH AAA 14 1114 2 HOH HOH . G 5 HOH AAA 15 1115 12 HOH HOH . G 5 HOH AAA 16 1116 7 HOH HOH . G 5 HOH AAA 17 1117 62 HOH HOH . G 5 HOH AAA 18 1118 120 HOH HOH . G 5 HOH AAA 19 1119 47 HOH HOH . G 5 HOH AAA 20 1120 10 HOH HOH . G 5 HOH AAA 21 1121 112 HOH HOH . G 5 HOH AAA 22 1122 75 HOH HOH . G 5 HOH AAA 23 1123 19 HOH HOH . G 5 HOH AAA 24 1124 71 HOH HOH . G 5 HOH AAA 25 1125 53 HOH HOH . G 5 HOH AAA 26 1126 88 HOH HOH . G 5 HOH AAA 27 1127 70 HOH HOH . G 5 HOH AAA 28 1128 5 HOH HOH . G 5 HOH AAA 29 1129 124 HOH HOH . G 5 HOH AAA 30 1130 54 HOH HOH . G 5 HOH AAA 31 1131 85 HOH HOH . G 5 HOH AAA 32 1132 56 HOH HOH . G 5 HOH AAA 33 1133 30 HOH HOH . G 5 HOH AAA 34 1134 60 HOH HOH . G 5 HOH AAA 35 1135 45 HOH HOH . G 5 HOH AAA 36 1136 59 HOH HOH . G 5 HOH AAA 37 1137 17 HOH HOH . G 5 HOH AAA 38 1138 67 HOH HOH . G 5 HOH AAA 39 1139 15 HOH HOH . G 5 HOH AAA 40 1140 135 HOH HOH . G 5 HOH AAA 41 1141 1 HOH HOH . G 5 HOH AAA 42 1142 42 HOH HOH . G 5 HOH AAA 43 1143 74 HOH HOH . G 5 HOH AAA 44 1144 89 HOH HOH . G 5 HOH AAA 45 1145 29 HOH HOH . G 5 HOH AAA 46 1146 8 HOH HOH . G 5 HOH AAA 47 1147 66 HOH HOH . G 5 HOH AAA 48 1148 129 HOH HOH . G 5 HOH AAA 49 1149 69 HOH HOH . G 5 HOH AAA 50 1150 118 HOH HOH . G 5 HOH AAA 51 1151 13 HOH HOH . G 5 HOH AAA 52 1152 84 HOH HOH . G 5 HOH AAA 53 1153 131 HOH HOH . G 5 HOH AAA 54 1154 122 HOH HOH . G 5 HOH AAA 55 1155 116 HOH HOH . G 5 HOH AAA 56 1156 76 HOH HOH . G 5 HOH AAA 57 1157 6 HOH HOH . G 5 HOH AAA 58 1158 51 HOH HOH . G 5 HOH AAA 59 1159 109 HOH HOH . G 5 HOH AAA 60 1160 40 HOH HOH . G 5 HOH AAA 61 1161 16 HOH HOH . G 5 HOH AAA 62 1162 81 HOH HOH . G 5 HOH AAA 63 1163 41 HOH HOH . G 5 HOH AAA 64 1164 106 HOH HOH . G 5 HOH AAA 65 1165 37 HOH HOH . G 5 HOH AAA 66 1166 130 HOH HOH . G 5 HOH AAA 67 1167 93 HOH HOH . G 5 HOH AAA 68 1168 87 HOH HOH . G 5 HOH AAA 69 1169 34 HOH HOH . G 5 HOH AAA 70 1170 25 HOH HOH . G 5 HOH AAA 71 1171 73 HOH HOH . G 5 HOH AAA 72 1172 55 HOH HOH . G 5 HOH AAA 73 1173 90 HOH HOH . G 5 HOH AAA 74 1174 14 HOH HOH . G 5 HOH AAA 75 1175 27 HOH HOH . G 5 HOH AAA 76 1176 77 HOH HOH . G 5 HOH AAA 77 1177 79 HOH HOH . G 5 HOH AAA 78 1178 43 HOH HOH . G 5 HOH AAA 79 1179 64 HOH HOH . G 5 HOH AAA 80 1180 31 HOH HOH . G 5 HOH AAA 81 1181 99 HOH HOH . G 5 HOH AAA 82 1182 126 HOH HOH . G 5 HOH AAA 83 1183 78 HOH HOH . G 5 HOH AAA 84 1184 18 HOH HOH . G 5 HOH AAA 85 1185 28 HOH HOH . G 5 HOH AAA 86 1186 22 HOH HOH . G 5 HOH AAA 87 1187 61 HOH HOH . G 5 HOH AAA 88 1188 115 HOH HOH . G 5 HOH AAA 89 1189 107 HOH HOH . G 5 HOH AAA 90 1190 20 HOH HOH . G 5 HOH AAA 91 1191 94 HOH HOH . G 5 HOH AAA 92 1192 35 HOH HOH . G 5 HOH AAA 93 1193 102 HOH HOH . G 5 HOH AAA 94 1194 125 HOH HOH . G 5 HOH AAA 95 1195 119 HOH HOH . G 5 HOH AAA 96 1196 32 HOH HOH . G 5 HOH AAA 97 1197 80 HOH HOH . G 5 HOH AAA 98 1198 58 HOH HOH . G 5 HOH AAA 99 1199 48 HOH HOH . G 5 HOH AAA 100 1200 136 HOH HOH . G 5 HOH AAA 101 1201 33 HOH HOH . G 5 HOH AAA 102 1202 128 HOH HOH . G 5 HOH AAA 103 1203 98 HOH HOH . G 5 HOH AAA 104 1204 105 HOH HOH . G 5 HOH AAA 105 1205 108 HOH HOH . G 5 HOH AAA 106 1206 4 HOH HOH . G 5 HOH AAA 107 1207 134 HOH HOH . G 5 HOH AAA 108 1208 9 HOH HOH . G 5 HOH AAA 109 1209 123 HOH HOH . G 5 HOH AAA 110 1210 133 HOH HOH . G 5 HOH AAA 111 1211 137 HOH HOH . G 5 HOH AAA 112 1212 82 HOH HOH . G 5 HOH AAA 113 1213 86 HOH HOH . G 5 HOH AAA 114 1214 138 HOH HOH . H 5 HOH BBB 1 201 111 HOH HOH . H 5 HOH BBB 2 202 101 HOH HOH . H 5 HOH BBB 3 203 26 HOH HOH . H 5 HOH BBB 4 204 3 HOH HOH . H 5 HOH BBB 5 205 24 HOH HOH . H 5 HOH BBB 6 206 72 HOH HOH . H 5 HOH BBB 7 207 57 HOH HOH . H 5 HOH BBB 8 208 39 HOH HOH . H 5 HOH BBB 9 209 52 HOH HOH . H 5 HOH BBB 10 210 38 HOH HOH . H 5 HOH BBB 11 211 36 HOH HOH . H 5 HOH BBB 12 212 92 HOH HOH . H 5 HOH BBB 13 213 104 HOH HOH . H 5 HOH BBB 14 214 83 HOH HOH . H 5 HOH BBB 15 215 50 HOH HOH . H 5 HOH BBB 16 216 11 HOH HOH . H 5 HOH BBB 17 217 95 HOH HOH . H 5 HOH BBB 18 218 49 HOH HOH . H 5 HOH BBB 19 219 121 HOH HOH . H 5 HOH BBB 20 220 44 HOH HOH . H 5 HOH BBB 21 221 100 HOH HOH . H 5 HOH BBB 22 222 23 HOH HOH . H 5 HOH BBB 23 223 132 HOH HOH . H 5 HOH BBB 24 224 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . C 3 -8.499 -19.206 18.312 1 20.57 ? FE1 SF4 1001 AAA 1 HETATM 2 FE FE2 SF4 . . . C 3 -10.72 -19.357 19.793 1 21.02 ? FE2 SF4 1001 AAA 1 HETATM 3 FE FE3 SF4 . . . C 3 -10.706 -19.973 17.059 1 19.44 ? FE3 SF4 1001 AAA 1 HETATM 4 FE FE4 SF4 . . . C 3 -10.408 -17.408 17.92 1 19.02 ? FE4 SF4 1001 AAA 1 HETATM 5 S S1 SF4 . . . C 3 -12.146 -18.781 18.148 1 20.44 ? S1 SF4 1001 AAA 1 HETATM 6 S S2 SF4 . . . C 3 -9.263 -18.454 16.373 1 19.68 ? S2 SF4 1001 AAA 1 HETATM 7 S S3 SF4 . . . C 3 -9.236 -17.708 19.726 1 20.47 ? S3 SF4 1001 AAA 1 HETATM 8 S S4 SF4 . . . C 3 -9.709 -21.001 18.766 1 21.74 ? S4 SF4 1001 AAA 1 HETATM 9 H HS4 SF4 . . . C 3 -9.222 -22.1 19.036 1 20.91 ? HS4 SF4 1001 AAA 1 HETATM 10 H HS3 SF4 . . . C 3 -8.697 -16.96 20.536 1 20.31 ? HS3 SF4 1001 AAA 1 HETATM 11 H HS2 SF4 . . . C 3 -8.715 -18.158 15.308 1 19.67 ? HS2 SF4 1001 AAA 1 HETATM 12 H HS1 SF4 . . . C 3 -13.362 -18.605 18.098 1 20.07 ? HS1 SF4 1001 AAA 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #