data_6SIK
#
_model_server_result.job_id            x1IlQdYL4ziQ8vfpA6aNwQ 
_model_server_result.datetime_utc      '2024-11-16 16:41:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sik 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    6SIK 
#
_exptl.entry_id    6SIK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6SIK 
_cell.length_a            78.87 
_cell.length_b            78.87 
_cell.length_c            36.88 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SIK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    'P 4nw 2abw' 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 24 A CYS 24 1_555 A SG CYS 145 A CYS 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf2 A SG CYS 48 A CYS 48 1_555 A SG CYS 133 A CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf3 A SG CYS 82 A CYS 82 1_555 A SG CYS 98 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf4 A SG CYS 94 A CYS 94 1_555 A SG CYS 112 A CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc1 A O SER 78 A SER 78 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc2 A O CYS 82 A CYS 82 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? 
metalc ? metalc3 A OG SER 90 A SER 90 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc4 A O ARG 91 A ARG 91 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? 
metalc ? metalc5 G NA NA . A NA 206 1_555 P O HOH . A HOH 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? 
metalc ? metalc6 G NA NA . A NA 206 1_555 P O HOH . A HOH 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 89 n n 
C1 C2 EDO sing 90 n n 
C1 H11 EDO sing 91 n n 
C1 H12 EDO sing 92 n n 
O1 HO1 EDO sing 93 n n 
C2 O2 EDO sing 94 n n 
C2 H21 EDO sing 95 n n 
C2 H22 EDO sing 96 n n 
O2 HO2 EDO sing 97 n n 
#
_atom_sites.entry_id                     6SIK 
_atom_sites.fract_transf_matrix[1][1]    0.012679 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012679 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.027115 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 201 148 EDO EDO . 
C 2 EDO A 1 202 149 EDO EDO . 
D 2 EDO A 1 203 150 EDO EDO . 
E 3 ACT A 1 204 151 ACT ACT . 
F 3 ACT A 1 205 152 ACT ACT . 
G 4 NA A 1 206 153 NA NA . 
H 5 CL A 1 207 154 CL CL . 
I 5 CL A 1 208 155 CL CL . 
J 5 CL A 1 209 156 CL CL . 
K 5 CL A 1 210 157 CL CL . 
L 5 CL A 1 211 158 CL CL . 
M 5 CL A 1 212 159 CL CL . 
N 5 CL A 1 213 160 CL CL . 
O 5 CL A 1 214 161 CL CL . 
P 6 HOH A 1 301 66 HOH HOH . 
P 6 HOH A 2 302 98 HOH HOH . 
P 6 HOH A 3 303 101 HOH HOH . 
P 6 HOH A 4 304 168 HOH HOH . 
P 6 HOH A 5 305 122 HOH HOH . 
P 6 HOH A 6 306 160 HOH HOH . 
P 6 HOH A 7 307 138 HOH HOH . 
P 6 HOH A 8 308 177 HOH HOH . 
P 6 HOH A 9 309 159 HOH HOH . 
P 6 HOH A 10 310 169 HOH HOH . 
P 6 HOH A 11 311 14 HOH HOH . 
P 6 HOH A 12 312 90 HOH HOH . 
P 6 HOH A 13 313 107 HOH HOH . 
P 6 HOH A 14 314 65 HOH HOH . 
P 6 HOH A 15 315 20 HOH HOH . 
P 6 HOH A 16 316 180 HOH HOH . 
P 6 HOH A 17 317 21 HOH HOH . 
P 6 HOH A 18 318 76 HOH HOH . 
P 6 HOH A 19 319 23 HOH HOH . 
P 6 HOH A 20 320 1 HOH HOH . 
P 6 HOH A 21 321 47 HOH HOH . 
P 6 HOH A 22 322 119 HOH HOH . 
P 6 HOH A 23 323 58 HOH HOH . 
P 6 HOH A 24 324 59 HOH HOH . 
P 6 HOH A 25 325 44 HOH HOH . 
P 6 HOH A 26 326 25 HOH HOH . 
P 6 HOH A 27 327 94 HOH HOH . 
P 6 HOH A 28 328 178 HOH HOH . 
P 6 HOH A 29 329 52 HOH HOH . 
P 6 HOH A 30 330 36 HOH HOH . 
P 6 HOH A 31 331 87 HOH HOH . 
P 6 HOH A 32 332 57 HOH HOH . 
P 6 HOH A 33 333 55 HOH HOH . 
P 6 HOH A 34 334 7 HOH HOH . 
P 6 HOH A 35 335 82 HOH HOH . 
P 6 HOH A 36 336 64 HOH HOH . 
P 6 HOH A 37 337 162 HOH HOH . 
P 6 HOH A 38 338 16 HOH HOH . 
P 6 HOH A 39 339 56 HOH HOH . 
P 6 HOH A 40 340 2 HOH HOH . 
P 6 HOH A 41 341 79 HOH HOH . 
P 6 HOH A 42 342 68 HOH HOH . 
P 6 HOH A 43 343 92 HOH HOH . 
P 6 HOH A 44 344 4 HOH HOH . 
P 6 HOH A 45 345 80 HOH HOH . 
P 6 HOH A 46 346 73 HOH HOH . 
P 6 HOH A 47 347 75 HOH HOH . 
P 6 HOH A 48 348 41 HOH HOH . 
P 6 HOH A 49 349 84 HOH HOH . 
P 6 HOH A 50 350 106 HOH HOH . 
P 6 HOH A 51 351 12 HOH HOH . 
P 6 HOH A 52 352 15 HOH HOH . 
P 6 HOH A 53 353 161 HOH HOH . 
P 6 HOH A 54 354 144 HOH HOH . 
P 6 HOH A 55 355 45 HOH HOH . 
P 6 HOH A 56 356 31 HOH HOH . 
P 6 HOH A 57 357 167 HOH HOH . 
P 6 HOH A 58 358 95 HOH HOH . 
P 6 HOH A 59 359 5 HOH HOH . 
P 6 HOH A 60 360 110 HOH HOH . 
P 6 HOH A 61 361 89 HOH HOH . 
P 6 HOH A 62 362 29 HOH HOH . 
P 6 HOH A 63 363 108 HOH HOH . 
P 6 HOH A 64 364 67 HOH HOH . 
P 6 HOH A 65 365 39 HOH HOH . 
P 6 HOH A 66 366 43 HOH HOH . 
P 6 HOH A 67 367 137 HOH HOH . 
P 6 HOH A 68 368 30 HOH HOH . 
P 6 HOH A 69 369 32 HOH HOH . 
P 6 HOH A 70 370 8 HOH HOH . 
P 6 HOH A 71 371 9 HOH HOH . 
P 6 HOH A 72 372 63 HOH HOH . 
P 6 HOH A 73 373 10 HOH HOH . 
P 6 HOH A 74 374 86 HOH HOH . 
P 6 HOH A 75 375 136 HOH HOH . 
P 6 HOH A 76 376 22 HOH HOH . 
P 6 HOH A 77 377 37 HOH HOH . 
P 6 HOH A 78 378 3 HOH HOH . 
P 6 HOH A 79 379 124 HOH HOH . 
P 6 HOH A 80 380 18 HOH HOH . 
P 6 HOH A 81 381 13 HOH HOH . 
P 6 HOH A 82 382 114 HOH HOH . 
P 6 HOH A 83 383 81 HOH HOH . 
P 6 HOH A 84 384 17 HOH HOH . 
P 6 HOH A 85 385 146 HOH HOH . 
P 6 HOH A 86 386 141 HOH HOH . 
P 6 HOH A 87 387 49 HOH HOH . 
P 6 HOH A 88 388 77 HOH HOH . 
P 6 HOH A 89 389 105 HOH HOH . 
P 6 HOH A 90 390 140 HOH HOH . 
P 6 HOH A 91 391 182 HOH HOH . 
P 6 HOH A 92 392 117 HOH HOH . 
P 6 HOH A 93 393 28 HOH HOH . 
P 6 HOH A 94 394 35 HOH HOH . 
P 6 HOH A 95 395 34 HOH HOH . 
P 6 HOH A 96 396 128 HOH HOH . 
P 6 HOH A 97 397 24 HOH HOH . 
P 6 HOH A 98 398 113 HOH HOH . 
P 6 HOH A 99 399 11 HOH HOH . 
P 6 HOH A 100 400 46 HOH HOH . 
P 6 HOH A 101 401 42 HOH HOH . 
P 6 HOH A 102 402 145 HOH HOH . 
P 6 HOH A 103 403 97 HOH HOH . 
P 6 HOH A 104 404 103 HOH HOH . 
P 6 HOH A 105 405 51 HOH HOH . 
P 6 HOH A 106 406 179 HOH HOH . 
P 6 HOH A 107 407 163 HOH HOH . 
P 6 HOH A 108 408 109 HOH HOH . 
P 6 HOH A 109 409 83 HOH HOH . 
P 6 HOH A 110 410 6 HOH HOH . 
P 6 HOH A 111 411 129 HOH HOH . 
P 6 HOH A 112 412 26 HOH HOH . 
P 6 HOH A 113 413 156 HOH HOH . 
P 6 HOH A 114 414 142 HOH HOH . 
P 6 HOH A 115 415 70 HOH HOH . 
P 6 HOH A 116 416 116 HOH HOH . 
P 6 HOH A 117 417 157 HOH HOH . 
P 6 HOH A 118 418 121 HOH HOH . 
P 6 HOH A 119 419 171 HOH HOH . 
P 6 HOH A 120 420 62 HOH HOH . 
P 6 HOH A 121 421 133 HOH HOH . 
P 6 HOH A 122 422 40 HOH HOH . 
P 6 HOH A 123 423 72 HOH HOH . 
P 6 HOH A 124 424 27 HOH HOH . 
P 6 HOH A 125 425 151 HOH HOH . 
P 6 HOH A 126 426 134 HOH HOH . 
P 6 HOH A 127 427 60 HOH HOH . 
P 6 HOH A 128 428 78 HOH HOH . 
P 6 HOH A 129 429 131 HOH HOH . 
P 6 HOH A 130 430 1 HOH HOH . 
P 6 HOH A 131 431 130 HOH HOH . 
P 6 HOH A 132 432 115 HOH HOH . 
P 6 HOH A 133 433 88 HOH HOH . 
P 6 HOH A 134 434 85 HOH HOH . 
P 6 HOH A 135 435 164 HOH HOH . 
P 6 HOH A 136 436 33 HOH HOH . 
P 6 HOH A 137 437 125 HOH HOH . 
P 6 HOH A 138 438 153 HOH HOH . 
P 6 HOH A 139 439 158 HOH HOH . 
P 6 HOH A 140 440 71 HOH HOH . 
P 6 HOH A 141 441 61 HOH HOH . 
P 6 HOH A 142 442 91 HOH HOH . 
P 6 HOH A 143 443 104 HOH HOH . 
P 6 HOH A 144 444 100 HOH HOH . 
P 6 HOH A 145 445 184 HOH HOH . 
P 6 HOH A 146 446 135 HOH HOH . 
P 6 HOH A 147 447 172 HOH HOH . 
P 6 HOH A 148 448 54 HOH HOH . 
P 6 HOH A 149 449 38 HOH HOH . 
P 6 HOH A 150 450 170 HOH HOH . 
P 6 HOH A 151 451 150 HOH HOH . 
P 6 HOH A 152 452 166 HOH HOH . 
P 6 HOH A 153 453 174 HOH HOH . 
P 6 HOH A 154 454 149 HOH HOH . 
P 6 HOH A 155 455 123 HOH HOH . 
P 6 HOH A 156 456 126 HOH HOH . 
P 6 HOH A 157 457 183 HOH HOH . 
P 6 HOH A 158 458 48 HOH HOH . 
P 6 HOH A 159 459 112 HOH HOH . 
P 6 HOH A 160 460 96 HOH HOH . 
P 6 HOH A 161 461 99 HOH HOH . 
P 6 HOH A 162 462 53 HOH HOH . 
P 6 HOH A 163 463 165 HOH HOH . 
P 6 HOH A 164 464 132 HOH HOH . 
P 6 HOH A 165 465 181 HOH HOH . 
P 6 HOH A 166 466 118 HOH HOH . 
P 6 HOH A 167 467 147 HOH HOH . 
P 6 HOH A 168 468 102 HOH HOH . 
P 6 HOH A 169 469 143 HOH HOH . 
P 6 HOH A 170 470 19 HOH HOH . 
P 6 HOH A 171 471 111 HOH HOH . 
P 6 HOH A 172 472 93 HOH HOH . 
P 6 HOH A 173 473 173 HOH HOH . 
P 6 HOH A 174 474 139 HOH HOH . 
P 6 HOH A 175 475 152 HOH HOH . 
P 6 HOH A 176 476 120 HOH HOH . 
P 6 HOH A 177 477 50 HOH HOH . 
P 6 HOH A 178 478 74 HOH HOH . 
P 6 HOH A 179 479 127 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 2 19.019 48.977 26.016 1 40.25 ? C1 EDO 203 A 1 
HETATM 2 O O1 EDO . . . D 2 17.659 49.234 26.384 1 39.85 ? O1 EDO 203 A 1 
HETATM 3 C C2 EDO . . . D 2 19.48 47.626 26.549 1 34.14 ? C2 EDO 203 A 1 
HETATM 4 O O2 EDO . . . D 2 19.971 47.799 27.888 1 30.76 ? O2 EDO 203 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#