data_6SIY # _model_server_result.job_id fo392-p5vZpQwJv6-1Z05w _model_server_result.datetime_utc '2024-11-16 11:48:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6siy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":504}' # _entry.id 6SIY # _exptl.entry_id 6SIY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SIY _cell.length_a 107.373 _cell.length_b 138.584 _cell.length_c 130.414 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SIY _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ARG 78 A ARG 78 1_555 K MG MG . A MG 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.9 ? metalc ? metalc2 A O GLU 79 A GLU 79 1_555 K MG MG . A MG 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.961 ? metalc ? metalc3 A O LEU 81 A LEU 81 1_555 K MG MG . A MG 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? metalc ? metalc4 A O PRO 120 A PRO 120 1_555 L MG MG . A MG 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? metalc ? metalc5 A O GLY 147 A GLY 147 1_555 L MG MG . A MG 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? metalc ? metalc6 A OG1 THR 149 A THR 149 1_555 L MG MG . A MG 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.897 ? metalc ? metalc7 A SG CYS 248 A CYS 248 1_555 E ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.922 ? metalc ? metalc8 K MG MG . A MG 509 1_555 B O PRO 120 B PRO 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.952 ? metalc ? metalc9 K MG MG . A MG 509 1_555 B O GLY 147 B GLY 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc10 K MG MG . A MG 509 1_555 B OG1 THR 149 B THR 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.853 ? metalc ? metalc11 L MG MG . A MG 510 1_555 B O ARG 78 B ARG 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc12 L MG MG . A MG 510 1_555 B O GLU 79 B GLU 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc13 L MG MG . A MG 510 1_555 B O LEU 81 B LEU 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.883 ? metalc ? metalc14 B OE1 GLU 240 B GLU 240 1_555 O MG MG . B MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc15 B OE2 GLU 240 B GLU 240 1_555 O MG MG . B MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc16 B SG CYS 248 B CYS 248 1_555 P ZN ZN . B ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc17 B NE2 HIS 254 B HIS 254 1_555 P ZN ZN . B ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc18 B SG CYS 308 B CYS 308 1_555 P ZN ZN . B ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.976 ? metalc ? metalc19 B SG CYS 310 B CYS 310 1_555 P ZN ZN . B ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.837 ? metalc ? metalc20 M O1P AMP . B AMP 501 1_555 O MG MG . B MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc21 O MG MG . B MG 503 1_555 V O HOH . B HOH 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6SIY _atom_sites.fract_transf_matrix[1][1] 0.009313 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007216 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007668 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3HA A 1 501 501 3HA 3HA . D 3 AMP A 1 502 503 AMP AMP . E 4 ZN A 1 503 601 ZN ZN . F 5 EDO A 1 504 901 EDO EDO . G 5 EDO A 1 505 1001 EDO EDO . H 5 EDO A 1 506 1101 EDO EDO . I 5 EDO A 1 507 1201 EDO EDO . J 2 3HA A 1 508 1301 3HA 3HA . K 6 MG A 1 509 5 MG MG . L 6 MG A 1 510 6 MG MG . M 3 AMP B 1 501 501 AMP AMP . N 2 3HA B 1 502 502 3HA 3HA . O 6 MG B 1 503 503 MG MG . P 4 ZN B 1 504 601 ZN ZN . Q 5 EDO B 1 505 801 EDO EDO . R 7 PEG B 1 506 901 PEG PEG . S 2 3HA B 1 507 1001 3HA 3HA . T 7 PEG B 1 508 1 PEG PEG . U 8 HOH A 1 601 164 HOH HOH . U 8 HOH A 2 602 123 HOH HOH . U 8 HOH A 3 603 25 HOH HOH . U 8 HOH A 4 604 109 HOH HOH . U 8 HOH A 5 605 61 HOH HOH . U 8 HOH A 6 606 57 HOH HOH . U 8 HOH A 7 607 80 HOH HOH . U 8 HOH A 8 608 50 HOH HOH . U 8 HOH A 9 609 31 HOH HOH . U 8 HOH A 10 610 21 HOH HOH . U 8 HOH A 11 611 18 HOH HOH . U 8 HOH A 12 612 91 HOH HOH . U 8 HOH A 13 613 156 HOH HOH . U 8 HOH A 14 614 124 HOH HOH . U 8 HOH A 15 615 171 HOH HOH . U 8 HOH A 16 616 3 HOH HOH . U 8 HOH A 17 617 4 HOH HOH . U 8 HOH A 18 618 153 HOH HOH . U 8 HOH A 19 619 170 HOH HOH . U 8 HOH A 20 620 12 HOH HOH . U 8 HOH A 21 621 23 HOH HOH . U 8 HOH A 22 622 92 HOH HOH . U 8 HOH A 23 623 34 HOH HOH . U 8 HOH A 24 624 73 HOH HOH . U 8 HOH A 25 625 78 HOH HOH . U 8 HOH A 26 626 112 HOH HOH . U 8 HOH A 27 627 30 HOH HOH . U 8 HOH A 28 628 130 HOH HOH . U 8 HOH A 29 629 10 HOH HOH . U 8 HOH A 30 630 125 HOH HOH . U 8 HOH A 31 631 32 HOH HOH . U 8 HOH A 32 632 8 HOH HOH . U 8 HOH A 33 633 2 HOH HOH . U 8 HOH A 34 634 14 HOH HOH . U 8 HOH A 35 635 7 HOH HOH . U 8 HOH A 36 636 163 HOH HOH . U 8 HOH A 37 637 144 HOH HOH . U 8 HOH A 38 638 68 HOH HOH . U 8 HOH A 39 639 94 HOH HOH . U 8 HOH A 40 640 52 HOH HOH . U 8 HOH A 41 641 36 HOH HOH . U 8 HOH A 42 642 22 HOH HOH . U 8 HOH A 43 643 148 HOH HOH . U 8 HOH A 44 644 60 HOH HOH . U 8 HOH A 45 645 169 HOH HOH . U 8 HOH A 46 646 114 HOH HOH . U 8 HOH A 47 647 77 HOH HOH . U 8 HOH A 48 648 17 HOH HOH . U 8 HOH A 49 649 46 HOH HOH . U 8 HOH A 50 650 174 HOH HOH . U 8 HOH A 51 651 106 HOH HOH . U 8 HOH A 52 652 76 HOH HOH . U 8 HOH A 53 653 63 HOH HOH . U 8 HOH A 54 654 129 HOH HOH . U 8 HOH A 55 655 51 HOH HOH . U 8 HOH A 56 656 59 HOH HOH . U 8 HOH A 57 657 146 HOH HOH . U 8 HOH A 58 658 11 HOH HOH . U 8 HOH A 59 659 140 HOH HOH . U 8 HOH A 60 660 97 HOH HOH . U 8 HOH A 61 661 133 HOH HOH . U 8 HOH A 62 662 27 HOH HOH . U 8 HOH A 63 663 24 HOH HOH . U 8 HOH A 64 664 115 HOH HOH . U 8 HOH A 65 665 122 HOH HOH . U 8 HOH A 66 666 111 HOH HOH . U 8 HOH A 67 667 167 HOH HOH . U 8 HOH A 68 668 132 HOH HOH . U 8 HOH A 69 669 116 HOH HOH . U 8 HOH A 70 670 96 HOH HOH . U 8 HOH A 71 671 152 HOH HOH . V 8 HOH B 1 601 162 HOH HOH . V 8 HOH B 2 602 127 HOH HOH . V 8 HOH B 3 603 95 HOH HOH . V 8 HOH B 4 604 113 HOH HOH . V 8 HOH B 5 605 110 HOH HOH . V 8 HOH B 6 606 26 HOH HOH . V 8 HOH B 7 607 19 HOH HOH . V 8 HOH B 8 608 147 HOH HOH . V 8 HOH B 9 609 99 HOH HOH . V 8 HOH B 10 610 93 HOH HOH . V 8 HOH B 11 611 107 HOH HOH . V 8 HOH B 12 612 37 HOH HOH . V 8 HOH B 13 613 71 HOH HOH . V 8 HOH B 14 614 136 HOH HOH . V 8 HOH B 15 615 1 HOH HOH . V 8 HOH B 16 616 159 HOH HOH . V 8 HOH B 17 617 165 HOH HOH . V 8 HOH B 18 618 135 HOH HOH . V 8 HOH B 19 619 87 HOH HOH . V 8 HOH B 20 620 84 HOH HOH . V 8 HOH B 21 621 82 HOH HOH . V 8 HOH B 22 622 102 HOH HOH . V 8 HOH B 23 623 145 HOH HOH . V 8 HOH B 24 624 90 HOH HOH . V 8 HOH B 25 625 53 HOH HOH . V 8 HOH B 26 626 54 HOH HOH . V 8 HOH B 27 627 49 HOH HOH . V 8 HOH B 28 628 75 HOH HOH . V 8 HOH B 29 629 86 HOH HOH . V 8 HOH B 30 630 108 HOH HOH . V 8 HOH B 31 631 103 HOH HOH . V 8 HOH B 32 632 56 HOH HOH . V 8 HOH B 33 633 64 HOH HOH . V 8 HOH B 34 634 83 HOH HOH . V 8 HOH B 35 635 66 HOH HOH . V 8 HOH B 36 636 168 HOH HOH . V 8 HOH B 37 637 160 HOH HOH . V 8 HOH B 38 638 9 HOH HOH . V 8 HOH B 39 639 158 HOH HOH . V 8 HOH B 40 640 29 HOH HOH . V 8 HOH B 41 641 5 HOH HOH . V 8 HOH B 42 642 119 HOH HOH . V 8 HOH B 43 643 35 HOH HOH . V 8 HOH B 44 644 65 HOH HOH . V 8 HOH B 45 645 81 HOH HOH . V 8 HOH B 46 646 41 HOH HOH . V 8 HOH B 47 647 126 HOH HOH . V 8 HOH B 48 648 173 HOH HOH . V 8 HOH B 49 649 141 HOH HOH . V 8 HOH B 50 650 155 HOH HOH . V 8 HOH B 51 651 40 HOH HOH . V 8 HOH B 52 652 142 HOH HOH . V 8 HOH B 53 653 48 HOH HOH . V 8 HOH B 54 654 15 HOH HOH . V 8 HOH B 55 655 74 HOH HOH . V 8 HOH B 56 656 28 HOH HOH . V 8 HOH B 57 657 138 HOH HOH . V 8 HOH B 58 658 118 HOH HOH . V 8 HOH B 59 659 67 HOH HOH . V 8 HOH B 60 660 172 HOH HOH . V 8 HOH B 61 661 47 HOH HOH . V 8 HOH B 62 662 69 HOH HOH . V 8 HOH B 63 663 33 HOH HOH . V 8 HOH B 64 664 154 HOH HOH . V 8 HOH B 65 665 143 HOH HOH . V 8 HOH B 66 666 43 HOH HOH . V 8 HOH B 67 667 101 HOH HOH . V 8 HOH B 68 668 62 HOH HOH . V 8 HOH B 69 669 88 HOH HOH . V 8 HOH B 70 670 39 HOH HOH . V 8 HOH B 71 671 72 HOH HOH . V 8 HOH B 72 672 45 HOH HOH . V 8 HOH B 73 673 16 HOH HOH . V 8 HOH B 74 674 85 HOH HOH . V 8 HOH B 75 675 6 HOH HOH . V 8 HOH B 76 676 120 HOH HOH . V 8 HOH B 77 677 157 HOH HOH . V 8 HOH B 78 678 128 HOH HOH . V 8 HOH B 79 679 104 HOH HOH . V 8 HOH B 80 680 42 HOH HOH . V 8 HOH B 81 681 70 HOH HOH . V 8 HOH B 82 682 79 HOH HOH . V 8 HOH B 83 683 134 HOH HOH . V 8 HOH B 84 684 55 HOH HOH . V 8 HOH B 85 685 121 HOH HOH . V 8 HOH B 86 686 166 HOH HOH . V 8 HOH B 87 687 161 HOH HOH . V 8 HOH B 88 688 139 HOH HOH . V 8 HOH B 89 689 44 HOH HOH . V 8 HOH B 90 690 175 HOH HOH . V 8 HOH B 91 691 117 HOH HOH . V 8 HOH B 92 692 137 HOH HOH . V 8 HOH B 93 693 151 HOH HOH . V 8 HOH B 94 694 100 HOH HOH . V 8 HOH B 95 695 131 HOH HOH . V 8 HOH B 96 696 150 HOH HOH . V 8 HOH B 97 697 105 HOH HOH . V 8 HOH B 98 698 149 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id P _atom_site.label_entity_id 4 _atom_site.Cartn_x -30.885 _atom_site.Cartn_y -11.904 _atom_site.Cartn_z -60.45 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 91.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 504 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #