data_6SJP # _model_server_result.job_id NhM4QOkI1jkIIcwpdU7vMQ _model_server_result.datetime_utc '2024-11-27 17:00:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sjp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6SJP # _exptl.entry_id 6SJP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SJP _cell.length_a 76.04 _cell.length_b 83.86 _cell.length_c 86.63 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SJP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6SJP _atom_sites.fract_transf_matrix[1][1] 0.013151 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011925 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011543 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 401 5 GOL GOL . D 2 GOL A 1 402 7 GOL GOL . E 2 GOL A 1 403 8 GOL GOL . F 2 GOL B 1 401 4 GOL GOL . G 3 HOH A 1 501 50 HOH HOH . G 3 HOH A 2 502 66 HOH HOH . G 3 HOH A 3 503 79 HOH HOH . G 3 HOH A 4 504 54 HOH HOH . G 3 HOH A 5 505 121 HOH HOH . G 3 HOH A 6 506 52 HOH HOH . G 3 HOH A 7 507 48 HOH HOH . G 3 HOH A 8 508 21 HOH HOH . G 3 HOH A 9 509 91 HOH HOH . G 3 HOH A 10 510 26 HOH HOH . G 3 HOH A 11 511 105 HOH HOH . G 3 HOH A 12 512 146 HOH HOH . G 3 HOH A 13 513 149 HOH HOH . G 3 HOH A 14 514 65 HOH HOH . G 3 HOH A 15 515 116 HOH HOH . G 3 HOH A 16 516 41 HOH HOH . G 3 HOH A 17 517 69 HOH HOH . G 3 HOH A 18 518 122 HOH HOH . G 3 HOH A 19 519 18 HOH HOH . G 3 HOH A 20 520 62 HOH HOH . G 3 HOH A 21 521 15 HOH HOH . G 3 HOH A 22 522 132 HOH HOH . G 3 HOH A 23 523 135 HOH HOH . G 3 HOH A 24 524 120 HOH HOH . G 3 HOH A 25 525 27 HOH HOH . G 3 HOH A 26 526 93 HOH HOH . G 3 HOH A 27 527 57 HOH HOH . G 3 HOH A 28 528 148 HOH HOH . G 3 HOH A 29 529 73 HOH HOH . G 3 HOH A 30 530 123 HOH HOH . G 3 HOH A 31 531 95 HOH HOH . G 3 HOH A 32 532 19 HOH HOH . G 3 HOH A 33 533 22 HOH HOH . G 3 HOH A 34 534 13 HOH HOH . G 3 HOH A 35 535 90 HOH HOH . G 3 HOH A 36 536 150 HOH HOH . G 3 HOH A 37 537 49 HOH HOH . G 3 HOH A 38 538 14 HOH HOH . G 3 HOH A 39 539 97 HOH HOH . G 3 HOH A 40 540 100 HOH HOH . G 3 HOH A 41 541 140 HOH HOH . G 3 HOH A 42 542 29 HOH HOH . G 3 HOH A 43 543 72 HOH HOH . G 3 HOH A 44 544 88 HOH HOH . G 3 HOH A 45 545 33 HOH HOH . G 3 HOH A 46 546 83 HOH HOH . G 3 HOH A 47 547 134 HOH HOH . G 3 HOH A 48 548 75 HOH HOH . G 3 HOH A 49 549 113 HOH HOH . G 3 HOH A 50 550 70 HOH HOH . G 3 HOH A 51 551 145 HOH HOH . G 3 HOH A 52 552 138 HOH HOH . G 3 HOH A 53 553 107 HOH HOH . G 3 HOH A 54 554 124 HOH HOH . G 3 HOH A 55 555 126 HOH HOH . G 3 HOH A 56 556 127 HOH HOH . G 3 HOH A 57 557 129 HOH HOH . G 3 HOH A 58 558 125 HOH HOH . G 3 HOH A 59 559 117 HOH HOH . G 3 HOH A 60 560 59 HOH HOH . G 3 HOH A 61 561 111 HOH HOH . G 3 HOH A 62 562 106 HOH HOH . H 3 HOH B 1 501 128 HOH HOH . H 3 HOH B 2 502 60 HOH HOH . H 3 HOH B 3 503 35 HOH HOH . H 3 HOH B 4 504 61 HOH HOH . H 3 HOH B 5 505 24 HOH HOH . H 3 HOH B 6 506 67 HOH HOH . H 3 HOH B 7 507 131 HOH HOH . H 3 HOH B 8 508 108 HOH HOH . H 3 HOH B 9 509 39 HOH HOH . H 3 HOH B 10 510 78 HOH HOH . H 3 HOH B 11 511 23 HOH HOH . H 3 HOH B 12 512 58 HOH HOH . H 3 HOH B 13 513 82 HOH HOH . H 3 HOH B 14 514 89 HOH HOH . H 3 HOH B 15 515 53 HOH HOH . H 3 HOH B 16 516 16 HOH HOH . H 3 HOH B 17 517 81 HOH HOH . H 3 HOH B 18 518 36 HOH HOH . H 3 HOH B 19 519 17 HOH HOH . H 3 HOH B 20 520 130 HOH HOH . H 3 HOH B 21 521 139 HOH HOH . H 3 HOH B 22 522 99 HOH HOH . H 3 HOH B 23 523 86 HOH HOH . H 3 HOH B 24 524 137 HOH HOH . H 3 HOH B 25 525 11 HOH HOH . H 3 HOH B 26 526 37 HOH HOH . H 3 HOH B 27 527 63 HOH HOH . H 3 HOH B 28 528 55 HOH HOH . H 3 HOH B 29 529 118 HOH HOH . H 3 HOH B 30 530 31 HOH HOH . H 3 HOH B 31 531 71 HOH HOH . H 3 HOH B 32 532 144 HOH HOH . H 3 HOH B 33 533 84 HOH HOH . H 3 HOH B 34 534 92 HOH HOH . H 3 HOH B 35 535 34 HOH HOH . H 3 HOH B 36 536 64 HOH HOH . H 3 HOH B 37 537 25 HOH HOH . H 3 HOH B 38 538 40 HOH HOH . H 3 HOH B 39 539 109 HOH HOH . H 3 HOH B 40 540 141 HOH HOH . H 3 HOH B 41 541 44 HOH HOH . H 3 HOH B 42 542 74 HOH HOH . H 3 HOH B 43 543 119 HOH HOH . H 3 HOH B 44 544 28 HOH HOH . H 3 HOH B 45 545 46 HOH HOH . H 3 HOH B 46 546 80 HOH HOH . H 3 HOH B 47 547 101 HOH HOH . H 3 HOH B 48 548 77 HOH HOH . H 3 HOH B 49 549 20 HOH HOH . H 3 HOH B 50 550 56 HOH HOH . H 3 HOH B 51 551 10 HOH HOH . H 3 HOH B 52 552 32 HOH HOH . H 3 HOH B 53 553 68 HOH HOH . H 3 HOH B 54 554 12 HOH HOH . H 3 HOH B 55 555 38 HOH HOH . H 3 HOH B 56 556 30 HOH HOH . H 3 HOH B 57 557 47 HOH HOH . H 3 HOH B 58 558 96 HOH HOH . H 3 HOH B 59 559 112 HOH HOH . H 3 HOH B 60 560 102 HOH HOH . H 3 HOH B 61 561 51 HOH HOH . H 3 HOH B 62 562 98 HOH HOH . H 3 HOH B 63 563 115 HOH HOH . H 3 HOH B 64 564 76 HOH HOH . H 3 HOH B 65 565 133 HOH HOH . H 3 HOH B 66 566 42 HOH HOH . H 3 HOH B 67 567 45 HOH HOH . H 3 HOH B 68 568 142 HOH HOH . H 3 HOH B 69 569 43 HOH HOH . H 3 HOH B 70 570 85 HOH HOH . H 3 HOH B 71 571 94 HOH HOH . H 3 HOH B 72 572 136 HOH HOH . H 3 HOH B 73 573 87 HOH HOH . H 3 HOH B 74 574 147 HOH HOH . H 3 HOH B 75 575 104 HOH HOH . H 3 HOH B 76 576 114 HOH HOH . H 3 HOH B 77 577 143 HOH HOH . H 3 HOH B 78 578 103 HOH HOH . H 3 HOH B 79 579 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 21.109 -30.475 75.346 1 52.69 ? C1 GOL 401 A 1 HETATM 2 O O1 GOL . . . C 2 19.772 -30.031 75.127 1 50.33 ? O1 GOL 401 A 1 HETATM 3 C C2 GOL . . . C 2 21.856 -29.572 76.308 1 51.6 ? C2 GOL 401 A 1 HETATM 4 O O2 GOL . . . C 2 23.173 -29.332 75.811 1 47.23 ? O2 GOL 401 A 1 HETATM 5 C C3 GOL . . . C 2 21.946 -30.134 77.713 1 51.47 ? C3 GOL 401 A 1 HETATM 6 O O3 GOL . . . C 2 21.798 -29.124 78.709 1 48.86 ? O3 GOL 401 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #