data_6SJR
#
_model_server_result.job_id            EEkZV2W7DlkYx7sIQ8vCcw 
_model_server_result.datetime_utc      '2024-11-23 22:21:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sjr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":905}' 
#
_entry.id    6SJR 
#
_exptl.entry_id    6SJR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6SJR 
_cell.length_a            76.02 
_cell.length_b            84.01 
_cell.length_c            86.4 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SJR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 I N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6SJR 
_atom_sites.fract_transf_matrix[1][1]    0.013154 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011903 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011574 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 THH A 1 901 901 THH THL . 
D 3 GOL A 1 902 5 GOL GOL . 
E 3 GOL A 1 903 6 GOL GOL . 
F 3 GOL A 1 904 7 GOL GOL . 
G 3 GOL A 1 905 8 GOL GOL . 
H 2 THH B 1 901 901 THH THL . 
I 3 GOL B 1 902 4 GOL GOL . 
J 4 HOH A 1 1001 234 HOH HOH . 
J 4 HOH A 2 1002 91 HOH HOH . 
J 4 HOH A 3 1003 121 HOH HOH . 
J 4 HOH A 4 1004 29 HOH HOH . 
J 4 HOH A 5 1005 38 HOH HOH . 
J 4 HOH A 6 1006 87 HOH HOH . 
J 4 HOH A 7 1007 79 HOH HOH . 
J 4 HOH A 8 1008 65 HOH HOH . 
J 4 HOH A 9 1009 140 HOH HOH . 
J 4 HOH A 10 1010 17 HOH HOH . 
J 4 HOH A 11 1011 202 HOH HOH . 
J 4 HOH A 12 1012 124 HOH HOH . 
J 4 HOH A 13 1013 76 HOH HOH . 
J 4 HOH A 14 1014 158 HOH HOH . 
J 4 HOH A 15 1015 94 HOH HOH . 
J 4 HOH A 16 1016 191 HOH HOH . 
J 4 HOH A 17 1017 114 HOH HOH . 
J 4 HOH A 18 1018 122 HOH HOH . 
J 4 HOH A 19 1019 123 HOH HOH . 
J 4 HOH A 20 1020 59 HOH HOH . 
J 4 HOH A 21 1021 136 HOH HOH . 
J 4 HOH A 22 1022 95 HOH HOH . 
J 4 HOH A 23 1023 190 HOH HOH . 
J 4 HOH A 24 1024 78 HOH HOH . 
J 4 HOH A 25 1025 19 HOH HOH . 
J 4 HOH A 26 1026 89 HOH HOH . 
J 4 HOH A 27 1027 162 HOH HOH . 
J 4 HOH A 28 1028 83 HOH HOH . 
J 4 HOH A 29 1029 208 HOH HOH . 
J 4 HOH A 30 1030 170 HOH HOH . 
J 4 HOH A 31 1031 70 HOH HOH . 
J 4 HOH A 32 1032 159 HOH HOH . 
J 4 HOH A 33 1033 18 HOH HOH . 
J 4 HOH A 34 1034 56 HOH HOH . 
J 4 HOH A 35 1035 241 HOH HOH . 
J 4 HOH A 36 1036 15 HOH HOH . 
J 4 HOH A 37 1037 168 HOH HOH . 
J 4 HOH A 38 1038 193 HOH HOH . 
J 4 HOH A 39 1039 163 HOH HOH . 
J 4 HOH A 40 1040 84 HOH HOH . 
J 4 HOH A 41 1041 12 HOH HOH . 
J 4 HOH A 42 1042 143 HOH HOH . 
J 4 HOH A 43 1043 248 HOH HOH . 
J 4 HOH A 44 1044 64 HOH HOH . 
J 4 HOH A 45 1045 184 HOH HOH . 
J 4 HOH A 46 1046 196 HOH HOH . 
J 4 HOH A 47 1047 126 HOH HOH . 
J 4 HOH A 48 1048 127 HOH HOH . 
J 4 HOH A 49 1049 51 HOH HOH . 
J 4 HOH A 50 1050 90 HOH HOH . 
J 4 HOH A 51 1051 131 HOH HOH . 
J 4 HOH A 52 1052 25 HOH HOH . 
J 4 HOH A 53 1053 200 HOH HOH . 
J 4 HOH A 54 1054 211 HOH HOH . 
J 4 HOH A 55 1055 227 HOH HOH . 
J 4 HOH A 56 1056 37 HOH HOH . 
J 4 HOH A 57 1057 23 HOH HOH . 
J 4 HOH A 58 1058 104 HOH HOH . 
J 4 HOH A 59 1059 81 HOH HOH . 
J 4 HOH A 60 1060 57 HOH HOH . 
J 4 HOH A 61 1061 153 HOH HOH . 
J 4 HOH A 62 1062 135 HOH HOH . 
J 4 HOH A 63 1063 233 HOH HOH . 
J 4 HOH A 64 1064 242 HOH HOH . 
J 4 HOH A 65 1065 239 HOH HOH . 
J 4 HOH A 66 1066 213 HOH HOH . 
J 4 HOH A 67 1067 204 HOH HOH . 
J 4 HOH A 68 1068 160 HOH HOH . 
J 4 HOH A 69 1069 169 HOH HOH . 
J 4 HOH A 70 1070 174 HOH HOH . 
J 4 HOH A 71 1071 112 HOH HOH . 
J 4 HOH A 72 1072 247 HOH HOH . 
J 4 HOH A 73 1073 105 HOH HOH . 
J 4 HOH A 74 1074 197 HOH HOH . 
J 4 HOH A 75 1075 109 HOH HOH . 
J 4 HOH A 76 1076 125 HOH HOH . 
J 4 HOH A 77 1077 218 HOH HOH . 
J 4 HOH A 78 1078 137 HOH HOH . 
J 4 HOH A 79 1079 149 HOH HOH . 
J 4 HOH A 80 1080 203 HOH HOH . 
J 4 HOH A 81 1081 26 HOH HOH . 
J 4 HOH A 82 1082 52 HOH HOH . 
J 4 HOH A 83 1083 46 HOH HOH . 
J 4 HOH A 84 1084 130 HOH HOH . 
J 4 HOH A 85 1085 228 HOH HOH . 
J 4 HOH A 86 1086 172 HOH HOH . 
J 4 HOH A 87 1087 102 HOH HOH . 
J 4 HOH A 88 1088 249 HOH HOH . 
J 4 HOH A 89 1089 212 HOH HOH . 
J 4 HOH A 90 1090 224 HOH HOH . 
J 4 HOH A 91 1091 68 HOH HOH . 
J 4 HOH A 92 1092 99 HOH HOH . 
J 4 HOH A 93 1093 187 HOH HOH . 
J 4 HOH A 94 1094 182 HOH HOH . 
J 4 HOH A 95 1095 61 HOH HOH . 
J 4 HOH A 96 1096 219 HOH HOH . 
J 4 HOH A 97 1097 177 HOH HOH . 
J 4 HOH A 98 1098 176 HOH HOH . 
J 4 HOH A 99 1099 63 HOH HOH . 
J 4 HOH A 100 1100 214 HOH HOH . 
J 4 HOH A 101 1101 62 HOH HOH . 
J 4 HOH A 102 1102 231 HOH HOH . 
J 4 HOH A 103 1103 252 HOH HOH . 
J 4 HOH A 104 1104 173 HOH HOH . 
J 4 HOH A 105 1105 220 HOH HOH . 
J 4 HOH A 106 1106 67 HOH HOH . 
J 4 HOH A 107 1107 175 HOH HOH . 
J 4 HOH A 108 1108 53 HOH HOH . 
J 4 HOH A 109 1109 210 HOH HOH . 
J 4 HOH A 110 1110 237 HOH HOH . 
J 4 HOH A 111 1111 148 HOH HOH . 
J 4 HOH A 112 1112 21 HOH HOH . 
J 4 HOH A 113 1113 164 HOH HOH . 
J 4 HOH A 114 1114 181 HOH HOH . 
J 4 HOH A 115 1115 245 HOH HOH . 
K 4 HOH B 1 1001 240 HOH HOH . 
K 4 HOH B 2 1002 28 HOH HOH . 
K 4 HOH B 3 1003 31 HOH HOH . 
K 4 HOH B 4 1004 235 HOH HOH . 
K 4 HOH B 5 1005 223 HOH HOH . 
K 4 HOH B 6 1006 238 HOH HOH . 
K 4 HOH B 7 1007 36 HOH HOH . 
K 4 HOH B 8 1008 72 HOH HOH . 
K 4 HOH B 9 1009 225 HOH HOH . 
K 4 HOH B 10 1010 96 HOH HOH . 
K 4 HOH B 11 1011 106 HOH HOH . 
K 4 HOH B 12 1012 32 HOH HOH . 
K 4 HOH B 13 1013 206 HOH HOH . 
K 4 HOH B 14 1014 201 HOH HOH . 
K 4 HOH B 15 1015 77 HOH HOH . 
K 4 HOH B 16 1016 107 HOH HOH . 
K 4 HOH B 17 1017 250 HOH HOH . 
K 4 HOH B 18 1018 66 HOH HOH . 
K 4 HOH B 19 1019 108 HOH HOH . 
K 4 HOH B 20 1020 98 HOH HOH . 
K 4 HOH B 21 1021 55 HOH HOH . 
K 4 HOH B 22 1022 54 HOH HOH . 
K 4 HOH B 23 1023 103 HOH HOH . 
K 4 HOH B 24 1024 111 HOH HOH . 
K 4 HOH B 25 1025 92 HOH HOH . 
K 4 HOH B 26 1026 71 HOH HOH . 
K 4 HOH B 27 1027 60 HOH HOH . 
K 4 HOH B 28 1028 205 HOH HOH . 
K 4 HOH B 29 1029 185 HOH HOH . 
K 4 HOH B 30 1030 47 HOH HOH . 
K 4 HOH B 31 1031 74 HOH HOH . 
K 4 HOH B 32 1032 14 HOH HOH . 
K 4 HOH B 33 1033 232 HOH HOH . 
K 4 HOH B 34 1034 113 HOH HOH . 
K 4 HOH B 35 1035 118 HOH HOH . 
K 4 HOH B 36 1036 24 HOH HOH . 
K 4 HOH B 37 1037 16 HOH HOH . 
K 4 HOH B 38 1038 43 HOH HOH . 
K 4 HOH B 39 1039 30 HOH HOH . 
K 4 HOH B 40 1040 75 HOH HOH . 
K 4 HOH B 41 1041 155 HOH HOH . 
K 4 HOH B 42 1042 207 HOH HOH . 
K 4 HOH B 43 1043 116 HOH HOH . 
K 4 HOH B 44 1044 142 HOH HOH . 
K 4 HOH B 45 1045 10 HOH HOH . 
K 4 HOH B 46 1046 86 HOH HOH . 
K 4 HOH B 47 1047 33 HOH HOH . 
K 4 HOH B 48 1048 11 HOH HOH . 
K 4 HOH B 49 1049 110 HOH HOH . 
K 4 HOH B 50 1050 194 HOH HOH . 
K 4 HOH B 51 1051 93 HOH HOH . 
K 4 HOH B 52 1052 134 HOH HOH . 
K 4 HOH B 53 1053 42 HOH HOH . 
K 4 HOH B 54 1054 117 HOH HOH . 
K 4 HOH B 55 1055 217 HOH HOH . 
K 4 HOH B 56 1056 13 HOH HOH . 
K 4 HOH B 57 1057 44 HOH HOH . 
K 4 HOH B 58 1058 128 HOH HOH . 
K 4 HOH B 59 1059 133 HOH HOH . 
K 4 HOH B 60 1060 154 HOH HOH . 
K 4 HOH B 61 1061 39 HOH HOH . 
K 4 HOH B 62 1062 45 HOH HOH . 
K 4 HOH B 63 1063 101 HOH HOH . 
K 4 HOH B 64 1064 97 HOH HOH . 
K 4 HOH B 65 1065 157 HOH HOH . 
K 4 HOH B 66 1066 49 HOH HOH . 
K 4 HOH B 67 1067 88 HOH HOH . 
K 4 HOH B 68 1068 20 HOH HOH . 
K 4 HOH B 69 1069 178 HOH HOH . 
K 4 HOH B 70 1070 22 HOH HOH . 
K 4 HOH B 71 1071 146 HOH HOH . 
K 4 HOH B 72 1072 189 HOH HOH . 
K 4 HOH B 73 1073 141 HOH HOH . 
K 4 HOH B 74 1074 180 HOH HOH . 
K 4 HOH B 75 1075 147 HOH HOH . 
K 4 HOH B 76 1076 129 HOH HOH . 
K 4 HOH B 77 1077 216 HOH HOH . 
K 4 HOH B 78 1078 188 HOH HOH . 
K 4 HOH B 79 1079 119 HOH HOH . 
K 4 HOH B 80 1080 34 HOH HOH . 
K 4 HOH B 81 1081 82 HOH HOH . 
K 4 HOH B 82 1082 40 HOH HOH . 
K 4 HOH B 83 1083 58 HOH HOH . 
K 4 HOH B 84 1084 165 HOH HOH . 
K 4 HOH B 85 1085 27 HOH HOH . 
K 4 HOH B 86 1086 230 HOH HOH . 
K 4 HOH B 87 1087 50 HOH HOH . 
K 4 HOH B 88 1088 195 HOH HOH . 
K 4 HOH B 89 1089 35 HOH HOH . 
K 4 HOH B 90 1090 100 HOH HOH . 
K 4 HOH B 91 1091 139 HOH HOH . 
K 4 HOH B 92 1092 152 HOH HOH . 
K 4 HOH B 93 1093 145 HOH HOH . 
K 4 HOH B 94 1094 138 HOH HOH . 
K 4 HOH B 95 1095 48 HOH HOH . 
K 4 HOH B 96 1096 236 HOH HOH . 
K 4 HOH B 97 1097 151 HOH HOH . 
K 4 HOH B 98 1098 183 HOH HOH . 
K 4 HOH B 99 1099 69 HOH HOH . 
K 4 HOH B 100 1100 73 HOH HOH . 
K 4 HOH B 101 1101 41 HOH HOH . 
K 4 HOH B 102 1102 161 HOH HOH . 
K 4 HOH B 103 1103 215 HOH HOH . 
K 4 HOH B 104 1104 246 HOH HOH . 
K 4 HOH B 105 1105 132 HOH HOH . 
K 4 HOH B 106 1106 229 HOH HOH . 
K 4 HOH B 107 1107 144 HOH HOH . 
K 4 HOH B 108 1108 156 HOH HOH . 
K 4 HOH B 109 1109 115 HOH HOH . 
K 4 HOH B 110 1110 222 HOH HOH . 
K 4 HOH B 111 1111 192 HOH HOH . 
K 4 HOH B 112 1112 150 HOH HOH . 
K 4 HOH B 113 1113 120 HOH HOH . 
K 4 HOH B 114 1114 85 HOH HOH . 
K 4 HOH B 115 1115 179 HOH HOH . 
K 4 HOH B 116 1116 221 HOH HOH . 
K 4 HOH B 117 1117 80 HOH HOH . 
K 4 HOH B 118 1118 198 HOH HOH . 
K 4 HOH B 119 1119 199 HOH HOH . 
K 4 HOH B 120 1120 171 HOH HOH . 
K 4 HOH B 121 1121 209 HOH HOH . 
K 4 HOH B 122 1122 166 HOH HOH . 
K 4 HOH B 123 1123 167 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 3 29.411 -22.87 42.97 1 36.12 ? C1 GOL 905 A 1 
HETATM 2 O O1 GOL . . . G 3 28.023 -22.967 43.273 1 34.26 ? O1 GOL 905 A 1 
HETATM 3 C C2 GOL . . . G 3 29.665 -22.928 41.478 1 37.46 ? C2 GOL 905 A 1 
HETATM 4 O O2 GOL . . . G 3 30.916 -22.309 41.183 1 39.51 ? O2 GOL 905 A 1 
HETATM 5 C C3 GOL . . . G 3 29.655 -24.338 40.926 1 38.17 ? C3 GOL 905 A 1 
HETATM 6 O O3 GOL . . . G 3 29.193 -24.367 39.578 1 37.55 ? O3 GOL 905 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#