data_6SK9 # _model_server_result.job_id jlU821aHUxx5pmhsT6rBUg _model_server_result.datetime_utc '2024-12-23 08:51:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sk9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6SK9 # _exptl.entry_id 6SK9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 487.618 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[[6-(cyclohexylmethoxy)-7~{H}-purin-2-yl]amino]-~{N}-[3-(dimethylamino)propyl]benzenesulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 132.42 _cell.angle_gamma 90 _cell.entry_id 6SK9 _cell.length_a 100.02 _cell.length_b 56.89 _cell.length_c 77.94 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SK9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H33 N7 O3 S' _chem_comp.formula_weight 487.618 _chem_comp.id F9N _chem_comp.mon_nstd_flag . _chem_comp.name 3-[[6-(cyclohexylmethoxy)-7~{H}-purin-2-yl]amino]-~{N}-[3-(dimethylamino)propyl]benzenesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N21 C20 F9N doub 83 n y N21 C22 F9N sing 84 n y C20 N19 F9N sing 85 n y C22 N23 F9N doub 86 n y C22 C18 F9N sing 87 n y N23 C07 F9N sing 88 n y N19 C18 F9N sing 89 n y N06 C07 F9N sing 90 n n N06 C05 F9N sing 91 n n C07 N08 F9N doub 92 n y C18 C09 F9N doub 93 n y N08 C09 F9N sing 94 n y O34 S02 F9N doub 95 n n C09 O10 F9N sing 96 n n C05 C04 F9N doub 97 n y C05 C24 F9N sing 98 n y C04 C03 F9N sing 99 n y C24 C25 F9N doub 100 n y C11 O10 F9N sing 101 n n C11 C12 F9N sing 102 n n C03 S02 F9N sing 103 n n C03 C26 F9N doub 104 n y S02 O01 F9N doub 105 n n S02 N27 F9N sing 106 n n C25 C26 F9N sing 107 n y N27 C28 F9N sing 108 n n C14 C13 F9N sing 109 n n C14 C15 F9N sing 110 n n C12 C13 F9N sing 111 n n C12 C17 F9N sing 112 n n C17 C16 F9N sing 113 n n C15 C16 F9N sing 114 n n C28 C29 F9N sing 115 n n C29 C30 F9N sing 116 n n C30 N31 F9N sing 117 n n N31 C32 F9N sing 118 n n N31 C33 F9N sing 119 n n C13 H1 F9N sing 120 n n C13 H2 F9N sing 121 n n C15 H3 F9N sing 122 n n C15 H4 F9N sing 123 n n C17 H5 F9N sing 124 n n C17 H6 F9N sing 125 n n C20 H7 F9N sing 126 n n C24 H8 F9N sing 127 n n C26 H9 F9N sing 128 n n C28 H10 F9N sing 129 n n C28 H11 F9N sing 130 n n C04 H12 F9N sing 131 n n N06 H13 F9N sing 132 n n C11 H14 F9N sing 133 n n C11 H15 F9N sing 134 n n C12 H16 F9N sing 135 n n C14 H17 F9N sing 136 n n C14 H18 F9N sing 137 n n C16 H19 F9N sing 138 n n C16 H20 F9N sing 139 n n N19 H21 F9N sing 140 n n C25 H23 F9N sing 141 n n N27 H24 F9N sing 142 n n C29 H25 F9N sing 143 n n C29 H26 F9N sing 144 n n C30 H27 F9N sing 145 n n C30 H28 F9N sing 146 n n C32 H30 F9N sing 147 n n C32 H31 F9N sing 148 n n C32 H32 F9N sing 149 n n C33 H33 F9N sing 150 n n C33 H34 F9N sing 151 n n C33 H35 F9N sing 152 n n # _atom_sites.entry_id 6SK9 _atom_sites.fract_transf_matrix[1][1] 0.009998 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009136 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017578 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01738 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 F9N A 1 301 301 F9N F9N . C 3 GOL A 1 302 302 GOL GOL . D 4 HOH A 1 401 60 HOH HOH . D 4 HOH A 2 402 48 HOH HOH . D 4 HOH A 3 403 49 HOH HOH . D 4 HOH A 4 404 94 HOH HOH . D 4 HOH A 5 405 46 HOH HOH . D 4 HOH A 6 406 56 HOH HOH . D 4 HOH A 7 407 43 HOH HOH . D 4 HOH A 8 408 29 HOH HOH . D 4 HOH A 9 409 45 HOH HOH . D 4 HOH A 10 410 54 HOH HOH . D 4 HOH A 11 411 1 HOH HOH . D 4 HOH A 12 412 13 HOH HOH . D 4 HOH A 13 413 64 HOH HOH . D 4 HOH A 14 414 2 HOH HOH . D 4 HOH A 15 415 12 HOH HOH . D 4 HOH A 16 416 32 HOH HOH . D 4 HOH A 17 417 55 HOH HOH . D 4 HOH A 18 418 73 HOH HOH . D 4 HOH A 19 419 7 HOH HOH . D 4 HOH A 20 420 35 HOH HOH . D 4 HOH A 21 421 5 HOH HOH . D 4 HOH A 22 422 44 HOH HOH . D 4 HOH A 23 423 9 HOH HOH . D 4 HOH A 24 424 4 HOH HOH . D 4 HOH A 25 425 6 HOH HOH . D 4 HOH A 26 426 11 HOH HOH . D 4 HOH A 27 427 10 HOH HOH . D 4 HOH A 28 428 37 HOH HOH . D 4 HOH A 29 429 50 HOH HOH . D 4 HOH A 30 430 51 HOH HOH . D 4 HOH A 31 431 15 HOH HOH . D 4 HOH A 32 432 81 HOH HOH . D 4 HOH A 33 433 31 HOH HOH . D 4 HOH A 34 434 17 HOH HOH . D 4 HOH A 35 435 16 HOH HOH . D 4 HOH A 36 436 38 HOH HOH . D 4 HOH A 37 437 14 HOH HOH . D 4 HOH A 38 438 19 HOH HOH . D 4 HOH A 39 439 79 HOH HOH . D 4 HOH A 40 440 8 HOH HOH . D 4 HOH A 41 441 36 HOH HOH . D 4 HOH A 42 442 30 HOH HOH . D 4 HOH A 43 443 18 HOH HOH . D 4 HOH A 44 444 34 HOH HOH . D 4 HOH A 45 445 80 HOH HOH . D 4 HOH A 46 446 33 HOH HOH . D 4 HOH A 47 447 71 HOH HOH . D 4 HOH A 48 448 76 HOH HOH . D 4 HOH A 49 449 92 HOH HOH . D 4 HOH A 50 450 57 HOH HOH . D 4 HOH A 51 451 3 HOH HOH . D 4 HOH A 52 452 23 HOH HOH . D 4 HOH A 53 453 67 HOH HOH . D 4 HOH A 54 454 62 HOH HOH . D 4 HOH A 55 455 53 HOH HOH . D 4 HOH A 56 456 65 HOH HOH . D 4 HOH A 57 457 63 HOH HOH . D 4 HOH A 58 458 91 HOH HOH . D 4 HOH A 59 459 77 HOH HOH . D 4 HOH A 60 460 47 HOH HOH . D 4 HOH A 61 461 58 HOH HOH . D 4 HOH A 62 462 61 HOH HOH . D 4 HOH A 63 463 24 HOH HOH . D 4 HOH A 64 464 86 HOH HOH . D 4 HOH A 65 465 84 HOH HOH . D 4 HOH A 66 466 66 HOH HOH . D 4 HOH A 67 467 78 HOH HOH . D 4 HOH A 68 468 20 HOH HOH . D 4 HOH A 69 469 21 HOH HOH . D 4 HOH A 70 470 22 HOH HOH . D 4 HOH A 71 471 28 HOH HOH . D 4 HOH A 72 472 52 HOH HOH . D 4 HOH A 73 473 93 HOH HOH . D 4 HOH A 74 474 69 HOH HOH . D 4 HOH A 75 475 41 HOH HOH . D 4 HOH A 76 476 39 HOH HOH . D 4 HOH A 77 477 68 HOH HOH . D 4 HOH A 78 478 25 HOH HOH . D 4 HOH A 79 479 72 HOH HOH . D 4 HOH A 80 480 74 HOH HOH . D 4 HOH A 81 481 83 HOH HOH . D 4 HOH A 82 482 75 HOH HOH . D 4 HOH A 83 483 85 HOH HOH . D 4 HOH A 84 484 90 HOH HOH . D 4 HOH A 85 485 87 HOH HOH . D 4 HOH A 86 486 88 HOH HOH . D 4 HOH A 87 487 40 HOH HOH . D 4 HOH A 88 488 70 HOH HOH . D 4 HOH A 89 489 82 HOH HOH . D 4 HOH A 90 490 26 HOH HOH . D 4 HOH A 91 491 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 F9N . . . B 2 -25.008 11.986 15.448 1 70.87 ? C13 F9N 301 A 1 HETATM 2 C C15 F9N . . . B 2 -26.548 13.588 14.103 1 67.84 ? C15 F9N 301 A 1 HETATM 3 C C17 F9N . . . B 2 -27.356 12.067 16.002 1 67.56 ? C17 F9N 301 A 1 HETATM 4 C C20 F9N . . . B 2 -22.91 5.428 16.398 1 30.12 ? C20 F9N 301 A 1 HETATM 5 C C22 F9N . . . B 2 -23.705 5.963 18.342 1 29.7 ? C22 F9N 301 A 1 HETATM 6 C C24 F9N . . . B 2 -26.482 8.233 23.218 1 34.35 ? C24 F9N 301 A 1 HETATM 7 C C26 F9N . . . B 2 -26.949 10.628 23.349 1 37.78 ? C26 F9N 301 A 1 HETATM 8 C C28 F9N . . . B 2 -27.335 15.049 20.83 1 80.72 ? C28 F9N 301 A 1 HETATM 9 O O01 F9N . . . B 2 -25.361 13.468 22.42 1 90.15 ? O01 F9N 301 A 1 HETATM 10 S S02 F9N . . . B 2 -25.993 12.689 21.412 1 89.88 ? S02 F9N 301 A 1 HETATM 11 C C03 F9N . . . B 2 -26.275 10.928 22.147 1 45.15 ? C03 F9N 301 A 1 HETATM 12 C C04 F9N . . . B 2 -25.727 9.773 21.572 1 41.14 ? C04 F9N 301 A 1 HETATM 13 C C05 F9N . . . B 2 -25.775 8.419 22.012 1 29.49 ? C05 F9N 301 A 1 HETATM 14 N N06 F9N . . . B 2 -25.204 7.304 21.353 1 30.63 ? N06 F9N 301 A 1 HETATM 15 C C07 F9N . . . B 2 -24.801 7.174 20.006 1 25.31 ? C07 F9N 301 A 1 HETATM 16 N N08 F9N . . . B 2 -25.158 8.179 19.09 1 28.27 ? N08 F9N 301 A 1 HETATM 17 C C09 F9N . . . B 2 -24.784 8.109 17.807 1 33.3 ? C09 F9N 301 A 1 HETATM 18 O O10 F9N . . . B 2 -25.084 9.05 16.853 1 42.37 ? O10 F9N 301 A 1 HETATM 19 C C11 F9N . . . B 2 -25.917 10.193 17.097 1 46.59 ? C11 F9N 301 A 1 HETATM 20 C C12 F9N . . . B 2 -26.203 11.097 15.837 1 67.65 ? C12 F9N 301 A 1 HETATM 21 C C14 F9N . . . B 2 -25.205 12.844 14.171 1 69.67 ? C14 F9N 301 A 1 HETATM 22 C C16 F9N . . . B 2 -27.712 12.765 14.68 1 67.22 ? C16 F9N 301 A 1 HETATM 23 C C18 F9N . . . B 2 -24.053 6.979 17.448 1 28.32 ? C18 F9N 301 A 1 HETATM 24 N N19 F9N . . . B 2 -23.53 6.646 16.158 1 32.17 ? N19 F9N 301 A 1 HETATM 25 N N21 F9N . . . B 2 -22.957 4.978 17.645 1 31.2 ? N21 F9N 301 A 1 HETATM 26 N N23 F9N . . . B 2 -24.098 6.066 19.675 1 28.91 ? N23 F9N 301 A 1 HETATM 27 C C25 F9N . . . B 2 -27.063 9.338 23.857 1 34.25 ? C25 F9N 301 A 1 HETATM 28 N N27 F9N . . . B 2 -27.334 13.553 20.945 1 85.91 ? N27 F9N 301 A 1 HETATM 29 C C29 F9N . . . B 2 -26.958 15.747 19.467 1 78.57 ? C29 F9N 301 A 1 HETATM 30 C C30 F9N . . . B 2 -25.436 15.84 19.107 1 74.05 ? C30 F9N 301 A 1 HETATM 31 N N31 F9N . . . B 2 -24.65 17.003 19.783 1 82.06 ? N31 F9N 301 A 1 HETATM 32 C C32 F9N . . . B 2 -23.964 17.859 18.767 1 81.4 ? C32 F9N 301 A 1 HETATM 33 C C33 F9N . . . B 2 -25.537 17.951 20.53 1 81.44 ? C33 F9N 301 A 1 HETATM 34 O O34 F9N . . . B 2 -25.153 12.649 20.254 1 89.75 ? O34 F9N 301 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 34 #