data_6SL6 # _model_server_result.job_id '_GWZ3VIejTA3XdqCDvxWyA' _model_server_result.datetime_utc '2024-11-04 20:48:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sl6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6SL6 # _exptl.entry_id 6SL6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SL6 _cell.length_a 68.423 _cell.length_b 84.963 _cell.length_c 84.85 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SL6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 111 A CYS 176 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc2 A ND1 HIS 114 A HIS 179 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc3 A SG CYS 173 A CYS 238 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc4 A SG CYS 177 A CYS 242 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6SL6 _atom_sites.fract_transf_matrix[1][1] 0.014615 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01177 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011786 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 401 1 GOL GOL . C 2 GOL A 1 402 2 GOL GOL . D 3 ZN A 1 403 1 ZN ZN . E 4 HOH A 1 501 167 HOH HOH . E 4 HOH A 2 502 132 HOH HOH . E 4 HOH A 3 503 95 HOH HOH . E 4 HOH A 4 504 164 HOH HOH . E 4 HOH A 5 505 326 HOH HOH . E 4 HOH A 6 506 172 HOH HOH . E 4 HOH A 7 507 112 HOH HOH . E 4 HOH A 8 508 232 HOH HOH . E 4 HOH A 9 509 100 HOH HOH . E 4 HOH A 10 510 138 HOH HOH . E 4 HOH A 11 511 21 HOH HOH . E 4 HOH A 12 512 64 HOH HOH . E 4 HOH A 13 513 262 HOH HOH . E 4 HOH A 14 514 129 HOH HOH . E 4 HOH A 15 515 270 HOH HOH . E 4 HOH A 16 516 29 HOH HOH . E 4 HOH A 17 517 229 HOH HOH . E 4 HOH A 18 518 311 HOH HOH . E 4 HOH A 19 519 246 HOH HOH . E 4 HOH A 20 520 34 HOH HOH . E 4 HOH A 21 521 214 HOH HOH . E 4 HOH A 22 522 45 HOH HOH . E 4 HOH A 23 523 142 HOH HOH . E 4 HOH A 24 524 10 HOH HOH . E 4 HOH A 25 525 134 HOH HOH . E 4 HOH A 26 526 69 HOH HOH . E 4 HOH A 27 527 71 HOH HOH . E 4 HOH A 28 528 54 HOH HOH . E 4 HOH A 29 529 24 HOH HOH . E 4 HOH A 30 530 33 HOH HOH . E 4 HOH A 31 531 83 HOH HOH . E 4 HOH A 32 532 13 HOH HOH . E 4 HOH A 33 533 219 HOH HOH . E 4 HOH A 34 534 220 HOH HOH . E 4 HOH A 35 535 192 HOH HOH . E 4 HOH A 36 536 28 HOH HOH . E 4 HOH A 37 537 55 HOH HOH . E 4 HOH A 38 538 198 HOH HOH . E 4 HOH A 39 539 191 HOH HOH . E 4 HOH A 40 540 325 HOH HOH . E 4 HOH A 41 541 294 HOH HOH . E 4 HOH A 42 542 187 HOH HOH . E 4 HOH A 43 543 49 HOH HOH . E 4 HOH A 44 544 115 HOH HOH . E 4 HOH A 45 545 156 HOH HOH . E 4 HOH A 46 546 12 HOH HOH . E 4 HOH A 47 547 6 HOH HOH . E 4 HOH A 48 548 66 HOH HOH . E 4 HOH A 49 549 335 HOH HOH . E 4 HOH A 50 550 146 HOH HOH . E 4 HOH A 51 551 136 HOH HOH . E 4 HOH A 52 552 292 HOH HOH . E 4 HOH A 53 553 41 HOH HOH . E 4 HOH A 54 554 26 HOH HOH . E 4 HOH A 55 555 17 HOH HOH . E 4 HOH A 56 556 253 HOH HOH . E 4 HOH A 57 557 78 HOH HOH . E 4 HOH A 58 558 290 HOH HOH . E 4 HOH A 59 559 330 HOH HOH . E 4 HOH A 60 560 158 HOH HOH . E 4 HOH A 61 561 241 HOH HOH . E 4 HOH A 62 562 148 HOH HOH . E 4 HOH A 63 563 77 HOH HOH . E 4 HOH A 64 564 108 HOH HOH . E 4 HOH A 65 565 16 HOH HOH . E 4 HOH A 66 566 63 HOH HOH . E 4 HOH A 67 567 62 HOH HOH . E 4 HOH A 68 568 7 HOH HOH . E 4 HOH A 69 569 247 HOH HOH . E 4 HOH A 70 570 73 HOH HOH . E 4 HOH A 71 571 225 HOH HOH . E 4 HOH A 72 572 59 HOH HOH . E 4 HOH A 73 573 99 HOH HOH . E 4 HOH A 74 574 171 HOH HOH . E 4 HOH A 75 575 131 HOH HOH . E 4 HOH A 76 576 150 HOH HOH . E 4 HOH A 77 577 249 HOH HOH . E 4 HOH A 78 578 22 HOH HOH . E 4 HOH A 79 579 140 HOH HOH . E 4 HOH A 80 580 1 HOH HOH . E 4 HOH A 81 581 53 HOH HOH . E 4 HOH A 82 582 273 HOH HOH . E 4 HOH A 83 583 86 HOH HOH . E 4 HOH A 84 584 20 HOH HOH . E 4 HOH A 85 585 215 HOH HOH . E 4 HOH A 86 586 315 HOH HOH . E 4 HOH A 87 587 4 HOH HOH . E 4 HOH A 88 588 19 HOH HOH . E 4 HOH A 89 589 218 HOH HOH . E 4 HOH A 90 590 298 HOH HOH . E 4 HOH A 91 591 268 HOH HOH . E 4 HOH A 92 592 113 HOH HOH . E 4 HOH A 93 593 317 HOH HOH . E 4 HOH A 94 594 130 HOH HOH . E 4 HOH A 95 595 231 HOH HOH . E 4 HOH A 96 596 51 HOH HOH . E 4 HOH A 97 597 154 HOH HOH . E 4 HOH A 98 598 65 HOH HOH . E 4 HOH A 99 599 127 HOH HOH . E 4 HOH A 100 600 15 HOH HOH . E 4 HOH A 101 601 197 HOH HOH . E 4 HOH A 102 602 88 HOH HOH . E 4 HOH A 103 603 177 HOH HOH . E 4 HOH A 104 604 109 HOH HOH . E 4 HOH A 105 605 257 HOH HOH . E 4 HOH A 106 606 244 HOH HOH . E 4 HOH A 107 607 173 HOH HOH . E 4 HOH A 108 608 40 HOH HOH . E 4 HOH A 109 609 46 HOH HOH . E 4 HOH A 110 610 85 HOH HOH . E 4 HOH A 111 611 278 HOH HOH . E 4 HOH A 112 612 35 HOH HOH . E 4 HOH A 113 613 57 HOH HOH . E 4 HOH A 114 614 182 HOH HOH . E 4 HOH A 115 615 39 HOH HOH . E 4 HOH A 116 616 74 HOH HOH . E 4 HOH A 117 617 5 HOH HOH . E 4 HOH A 118 618 176 HOH HOH . E 4 HOH A 119 619 230 HOH HOH . E 4 HOH A 120 620 194 HOH HOH . E 4 HOH A 121 621 82 HOH HOH . E 4 HOH A 122 622 103 HOH HOH . E 4 HOH A 123 623 276 HOH HOH . E 4 HOH A 124 624 133 HOH HOH . E 4 HOH A 125 625 256 HOH HOH . E 4 HOH A 126 626 143 HOH HOH . E 4 HOH A 127 627 27 HOH HOH . E 4 HOH A 128 628 101 HOH HOH . E 4 HOH A 129 629 93 HOH HOH . E 4 HOH A 130 630 2 HOH HOH . E 4 HOH A 131 631 76 HOH HOH . E 4 HOH A 132 632 337 HOH HOH . E 4 HOH A 133 633 258 HOH HOH . E 4 HOH A 134 634 9 HOH HOH . E 4 HOH A 135 635 287 HOH HOH . E 4 HOH A 136 636 70 HOH HOH . E 4 HOH A 137 637 67 HOH HOH . E 4 HOH A 138 638 180 HOH HOH . E 4 HOH A 139 639 260 HOH HOH . E 4 HOH A 140 640 305 HOH HOH . E 4 HOH A 141 641 60 HOH HOH . E 4 HOH A 142 642 135 HOH HOH . E 4 HOH A 143 643 310 HOH HOH . E 4 HOH A 144 644 160 HOH HOH . E 4 HOH A 145 645 11 HOH HOH . E 4 HOH A 146 646 120 HOH HOH . E 4 HOH A 147 647 178 HOH HOH . E 4 HOH A 148 648 170 HOH HOH . E 4 HOH A 149 649 124 HOH HOH . E 4 HOH A 150 650 264 HOH HOH . E 4 HOH A 151 651 123 HOH HOH . E 4 HOH A 152 652 190 HOH HOH . E 4 HOH A 153 653 161 HOH HOH . E 4 HOH A 154 654 91 HOH HOH . E 4 HOH A 155 655 104 HOH HOH . E 4 HOH A 156 656 122 HOH HOH . E 4 HOH A 157 657 23 HOH HOH . E 4 HOH A 158 658 321 HOH HOH . E 4 HOH A 159 659 185 HOH HOH . E 4 HOH A 160 660 168 HOH HOH . E 4 HOH A 161 661 186 HOH HOH . E 4 HOH A 162 662 313 HOH HOH . E 4 HOH A 163 663 269 HOH HOH . E 4 HOH A 164 664 181 HOH HOH . E 4 HOH A 165 665 147 HOH HOH . E 4 HOH A 166 666 14 HOH HOH . E 4 HOH A 167 667 209 HOH HOH . E 4 HOH A 168 668 145 HOH HOH . E 4 HOH A 169 669 43 HOH HOH . E 4 HOH A 170 670 141 HOH HOH . E 4 HOH A 171 671 254 HOH HOH . E 4 HOH A 172 672 199 HOH HOH . E 4 HOH A 173 673 279 HOH HOH . E 4 HOH A 174 674 106 HOH HOH . E 4 HOH A 175 675 125 HOH HOH . E 4 HOH A 176 676 252 HOH HOH . E 4 HOH A 177 677 297 HOH HOH . E 4 HOH A 178 678 201 HOH HOH . E 4 HOH A 179 679 331 HOH HOH . E 4 HOH A 180 680 323 HOH HOH . E 4 HOH A 181 681 248 HOH HOH . E 4 HOH A 182 682 159 HOH HOH . E 4 HOH A 183 683 119 HOH HOH . E 4 HOH A 184 684 102 HOH HOH . E 4 HOH A 185 685 3 HOH HOH . E 4 HOH A 186 686 89 HOH HOH . E 4 HOH A 187 687 203 HOH HOH . E 4 HOH A 188 688 163 HOH HOH . E 4 HOH A 189 689 179 HOH HOH . E 4 HOH A 190 690 318 HOH HOH . E 4 HOH A 191 691 205 HOH HOH . E 4 HOH A 192 692 184 HOH HOH . E 4 HOH A 193 693 304 HOH HOH . E 4 HOH A 194 694 165 HOH HOH . E 4 HOH A 195 695 283 HOH HOH . E 4 HOH A 196 696 149 HOH HOH . E 4 HOH A 197 697 212 HOH HOH . E 4 HOH A 198 698 301 HOH HOH . E 4 HOH A 199 699 204 HOH HOH . E 4 HOH A 200 700 328 HOH HOH . E 4 HOH A 201 701 322 HOH HOH . E 4 HOH A 202 702 144 HOH HOH . E 4 HOH A 203 703 320 HOH HOH . E 4 HOH A 204 704 211 HOH HOH . E 4 HOH A 205 705 282 HOH HOH . E 4 HOH A 206 706 226 HOH HOH . E 4 HOH A 207 707 175 HOH HOH . E 4 HOH A 208 708 277 HOH HOH . E 4 HOH A 209 709 307 HOH HOH . E 4 HOH A 210 710 90 HOH HOH . E 4 HOH A 211 711 224 HOH HOH . E 4 HOH A 212 712 266 HOH HOH . E 4 HOH A 213 713 92 HOH HOH . E 4 HOH A 214 714 293 HOH HOH . E 4 HOH A 215 715 221 HOH HOH . E 4 HOH A 216 716 334 HOH HOH . E 4 HOH A 217 717 227 HOH HOH . E 4 HOH A 218 718 271 HOH HOH . E 4 HOH A 219 719 207 HOH HOH . E 4 HOH A 220 720 306 HOH HOH . E 4 HOH A 221 721 329 HOH HOH . E 4 HOH A 222 722 259 HOH HOH . E 4 HOH A 223 723 118 HOH HOH . E 4 HOH A 224 724 217 HOH HOH . E 4 HOH A 225 725 193 HOH HOH . E 4 HOH A 226 726 200 HOH HOH . E 4 HOH A 227 727 157 HOH HOH . E 4 HOH A 228 728 128 HOH HOH . E 4 HOH A 229 729 309 HOH HOH . E 4 HOH A 230 730 274 HOH HOH . E 4 HOH A 231 731 324 HOH HOH . E 4 HOH A 232 732 333 HOH HOH . E 4 HOH A 233 733 275 HOH HOH . E 4 HOH A 234 734 155 HOH HOH . E 4 HOH A 235 735 210 HOH HOH . E 4 HOH A 236 736 245 HOH HOH . E 4 HOH A 237 737 166 HOH HOH . E 4 HOH A 238 738 189 HOH HOH . E 4 HOH A 239 739 137 HOH HOH . E 4 HOH A 240 740 265 HOH HOH . E 4 HOH A 241 741 52 HOH HOH . E 4 HOH A 242 742 183 HOH HOH . E 4 HOH A 243 743 267 HOH HOH . E 4 HOH A 244 744 228 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 -19.579 -19.454 -7.651 1 38.65 ? C1 GOL 402 A 1 HETATM 2 O O1 GOL . . . C 2 -19.102 -18.225 -8.151 1 38.61 ? O1 GOL 402 A 1 HETATM 3 C C2 GOL . . . C 2 -19.213 -20.561 -8.655 1 39.01 ? C2 GOL 402 A 1 HETATM 4 O O2 GOL . . . C 2 -20.224 -21.507 -8.784 1 39.28 ? O2 GOL 402 A 1 HETATM 5 C C3 GOL . . . C 2 -17.922 -21.185 -8.101 1 38.37 ? C3 GOL 402 A 1 HETATM 6 O O3 GOL . . . C 2 -17.873 -22.484 -8.594 1 37.84 ? O3 GOL 402 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #