data_6SLJ # _model_server_result.job_id tWlQubih81kQaCv2ykLiJA _model_server_result.datetime_utc '2025-07-07 22:19:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6slj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1103}' # _entry.id 6SLJ # _exptl.entry_id 6SLJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SLJ _cell.length_a 130.597 _cell.length_b 142.021 _cell.length_c 241.59 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SLJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 I N N ? 7 L N N ? 7 M N N ? 7 O N N ? 7 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 G C1 3PE . B 3PE 1101 1_555 D SG CYS 1 D CYS 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.761 ? covale ? covale2 J C1 3PE . A 3PE 1101 1_555 C SG CYS 1 C CYS 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.761 ? covale ? covale3 C N CYS 1 C CYS 20 1_555 N C1 PLM . C PLM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale4 D N CYS 1 D CYS 20 1_555 Q O2 PLM . D PLM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.29 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 378 n n C1B O1B LMT sing 379 n n C1B O5B LMT sing 380 n n C1B H1B LMT sing 381 n n C2B C3B LMT sing 382 n n C2B O2B LMT sing 383 n n C2B H2B LMT sing 384 n n C3B C4B LMT sing 385 n n C3B O3B LMT sing 386 n n C3B H3B LMT sing 387 n n C4B C5B LMT sing 388 n n C4B O4' LMT sing 389 n n C4B H4B LMT sing 390 n n C5B C6B LMT sing 391 n n C5B O5B LMT sing 392 n n C5B H5B LMT sing 393 n n C6B O6B LMT sing 394 n n C6B "H6'2" LMT sing 395 n n C6B "H6'1" LMT sing 396 n n O1B C4' LMT sing 397 n n O2B H2O1 LMT sing 398 n n O3B H3O1 LMT sing 399 n n O4' H4O1 LMT sing 400 n n O6B H6B LMT sing 401 n n C1' C2' LMT sing 402 n n C1' O1' LMT sing 403 n n C1' O5' LMT sing 404 n n C1' H1' LMT sing 405 n n C2' C3' LMT sing 406 n n C2' O2' LMT sing 407 n n C2' H2' LMT sing 408 n n C3' C4' LMT sing 409 n n C3' O3' LMT sing 410 n n C3' H3' LMT sing 411 n n C4' C5' LMT sing 412 n n C4' H4' LMT sing 413 n n C5' C6' LMT sing 414 n n C5' O5' LMT sing 415 n n C5' H5' LMT sing 416 n n C6' O6' LMT sing 417 n n C6' H6D LMT sing 418 n n C6' H6E LMT sing 419 n n O1' C1 LMT sing 420 n n O2' H2O2 LMT sing 421 n n O3' H3O2 LMT sing 422 n n O6' H6' LMT sing 423 n n C1 C2 LMT sing 424 n n C1 H12 LMT sing 425 n n C1 H11 LMT sing 426 n n C2 C3 LMT sing 427 n n C2 H22 LMT sing 428 n n C2 H21 LMT sing 429 n n C3 C4 LMT sing 430 n n C3 H32 LMT sing 431 n n C3 H31 LMT sing 432 n n C4 C5 LMT sing 433 n n C4 H42 LMT sing 434 n n C4 H41 LMT sing 435 n n C5 C6 LMT sing 436 n n C5 H52 LMT sing 437 n n C5 H51 LMT sing 438 n n C6 C7 LMT sing 439 n n C6 H62 LMT sing 440 n n C6 H61 LMT sing 441 n n C7 C8 LMT sing 442 n n C7 H72 LMT sing 443 n n C7 H71 LMT sing 444 n n C8 C9 LMT sing 445 n n C8 H82 LMT sing 446 n n C8 H81 LMT sing 447 n n C9 C10 LMT sing 448 n n C9 H92 LMT sing 449 n n C9 H91 LMT sing 450 n n C10 C11 LMT sing 451 n n C10 H102 LMT sing 452 n n C10 H101 LMT sing 453 n n C11 C12 LMT sing 454 n n C11 H112 LMT sing 455 n n C11 H111 LMT sing 456 n n C12 H123 LMT sing 457 n n C12 H122 LMT sing 458 n n C12 H121 LMT sing 459 n n # _atom_sites.entry_id 6SLJ _atom_sites.fract_transf_matrix[1][1] 0.007657 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007041 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004139 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 3PE B 1 1101 1 3PE 3PE . H 6 C8E B 1 1102 1 C8E C8E . I 7 LMT B 1 1103 2 LMT LMT . J 5 3PE A 1 1101 2 3PE 3PE . K 6 C8E A 1 1102 2 C8E C8E . L 7 LMT A 1 1103 4 LMT LMT . M 7 LMT A 1 1104 5 LMT LMT . N 8 PLM C 1 601 2 PLM PLM . O 7 LMT C 1 602 1 LMT LMT . P 7 LMT C 1 603 3 LMT LMT . Q 8 PLM D 1 601 1 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . I 7 64.399 51.47 40.28 1 58.76 ? C1B LMT 1103 B 1 HETATM 2 C C2B LMT . . . I 7 63.63 51.226 41.605 1 66.06 ? C2B LMT 1103 B 1 HETATM 3 C C3B LMT . . . I 7 63.683 52.462 42.546 1 67.86 ? C3B LMT 1103 B 1 HETATM 4 C C4B LMT . . . I 7 65.103 53.084 42.637 1 67.07 ? C4B LMT 1103 B 1 HETATM 5 C C5B LMT . . . I 7 65.642 53.237 41.21 1 70 ? C5B LMT 1103 B 1 HETATM 6 C C6B LMT . . . I 7 67.025 53.878 41.226 1 80.66 ? C6B LMT 1103 B 1 HETATM 7 O O1B LMT . . . I 7 63.66 52.306 39.434 1 44.76 ? O1B LMT 1103 B 1 HETATM 8 O O2B LMT . . . I 7 62.327 50.92 41.282 1 68.96 ? O2B LMT 1103 B 1 HETATM 9 O O3B LMT . . . I 7 63.167 52.179 43.794 1 63.71 ? O3B LMT 1103 B 1 HETATM 10 O O4' LMT . . . I 7 65.055 54.323 43.241 1 62.85 ? O4' LMT 1103 B 1 HETATM 11 O O5B LMT . . . I 7 65.663 52.007 40.518 1 63.21 ? O5B LMT 1103 B 1 HETATM 12 O O6B LMT . . . I 7 66.944 55.206 40.866 1 88.87 ? O6B LMT 1103 B 1 HETATM 13 C C1' LMT . . . I 7 63.51 53.498 35.478 1 39.08 ? C1' LMT 1103 B 1 HETATM 14 C C2' LMT . . . I 7 64.066 52.071 35.708 1 37.19 ? C2' LMT 1103 B 1 HETATM 15 C C3' LMT . . . I 7 63.691 51.605 37.139 1 31.15 ? C3' LMT 1103 B 1 HETATM 16 C C4' LMT . . . I 7 64.195 52.623 38.162 1 32.21 ? C4' LMT 1103 B 1 HETATM 17 C C5' LMT . . . I 7 63.604 53.986 37.742 1 30.53 ? C5' LMT 1103 B 1 HETATM 18 C C6' LMT . . . I 7 63.859 55.077 38.761 1 38.66 ? C6' LMT 1103 B 1 HETATM 19 O O1' LMT . . . I 7 63.877 53.97 34.243 1 45.85 ? O1' LMT 1103 B 1 HETATM 20 O O2' LMT . . . I 7 63.5 51.212 34.784 1 44.07 ? O2' LMT 1103 B 1 HETATM 21 O O3' LMT . . . I 7 64.192 50.37 37.418 1 30.88 ? O3' LMT 1103 B 1 HETATM 22 O O5' LMT . . . I 7 64.053 54.374 36.465 1 26.17 ? O5' LMT 1103 B 1 HETATM 23 O O6' LMT . . . I 7 63.754 56.29 38.123 1 35.22 ? O6' LMT 1103 B 1 HETATM 24 C C1 LMT . . . I 7 62.827 54.228 33.332 1 47.31 ? C1 LMT 1103 B 1 HETATM 25 C C2 LMT . . . I 7 63.478 54.243 31.976 1 54.35 ? C2 LMT 1103 B 1 HETATM 26 C C3 LMT . . . I 7 62.637 54.705 30.816 1 64.67 ? C3 LMT 1103 B 1 HETATM 27 C C4 LMT . . . I 7 63.433 54.519 29.535 1 64.53 ? C4 LMT 1103 B 1 HETATM 28 C C5 LMT . . . I 7 62.541 54.46 28.334 1 56.96 ? C5 LMT 1103 B 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #