data_6SLT # _model_server_result.job_id BM7fswJJkCn30-A5zDERNA _model_server_result.datetime_utc '2024-11-15 07:58:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6slt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":603}' # _entry.id 6SLT # _exptl.entry_id 6SLT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6SLT _cell.length_a 138.25 _cell.length_b 138.25 _cell.length_c 142.01 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SLT _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 122 n n PA O2A FAD sing 123 n n PA O5B FAD sing 124 n n PA O3P FAD sing 125 n n O2A HOA2 FAD sing 126 n n O5B C5B FAD sing 127 n n C5B C4B FAD sing 128 n n C5B H51A FAD sing 129 n n C5B H52A FAD sing 130 n n C4B O4B FAD sing 131 n n C4B C3B FAD sing 132 n n C4B H4B FAD sing 133 n n O4B C1B FAD sing 134 n n C3B O3B FAD sing 135 n n C3B C2B FAD sing 136 n n C3B H3B FAD sing 137 n n O3B HO3A FAD sing 138 n n C2B O2B FAD sing 139 n n C2B C1B FAD sing 140 n n C2B H2B FAD sing 141 n n O2B HO2A FAD sing 142 n n C1B N9A FAD sing 143 n n C1B H1B FAD sing 144 n n N9A C8A FAD sing 145 n y N9A C4A FAD sing 146 n y C8A N7A FAD doub 147 n y C8A H8A FAD sing 148 n n N7A C5A FAD sing 149 n y C5A C6A FAD sing 150 n y C5A C4A FAD doub 151 n y C6A N6A FAD sing 152 n n C6A N1A FAD doub 153 n y N6A H61A FAD sing 154 n n N6A H62A FAD sing 155 n n N1A C2A FAD sing 156 n y C2A N3A FAD doub 157 n y C2A H2A FAD sing 158 n n N3A C4A FAD sing 159 n y N1 C2 FAD sing 160 n n N1 C10 FAD doub 161 n n C2 O2 FAD doub 162 n n C2 N3 FAD sing 163 n n N3 C4 FAD sing 164 n n N3 HN3 FAD sing 165 n n C4 O4 FAD doub 166 n n C4 C4X FAD sing 167 n n C4X N5 FAD doub 168 n n C4X C10 FAD sing 169 n n N5 C5X FAD sing 170 n n C5X C6 FAD doub 171 n y C5X C9A FAD sing 172 n y C6 C7 FAD sing 173 n y C6 H6 FAD sing 174 n n C7 C7M FAD sing 175 n n C7 C8 FAD doub 176 n y C7M HM71 FAD sing 177 n n C7M HM72 FAD sing 178 n n C7M HM73 FAD sing 179 n n C8 C8M FAD sing 180 n n C8 C9 FAD sing 181 n y C8M HM81 FAD sing 182 n n C8M HM82 FAD sing 183 n n C8M HM83 FAD sing 184 n n C9 C9A FAD doub 185 n y C9 H9 FAD sing 186 n n C9A N10 FAD sing 187 n n N10 C10 FAD sing 188 n n N10 C1' FAD sing 189 n n C1' C2' FAD sing 190 n n C1' "H1'1" FAD sing 191 n n C1' "H1'2" FAD sing 192 n n C2' O2' FAD sing 193 n n C2' C3' FAD sing 194 n n C2' H2' FAD sing 195 n n O2' HO2' FAD sing 196 n n C3' O3' FAD sing 197 n n C3' C4' FAD sing 198 n n C3' H3' FAD sing 199 n n O3' HO3' FAD sing 200 n n C4' O4' FAD sing 201 n n C4' C5' FAD sing 202 n n C4' H4' FAD sing 203 n n O4' HO4' FAD sing 204 n n C5' O5' FAD sing 205 n n C5' "H5'1" FAD sing 206 n n C5' "H5'2" FAD sing 207 n n O5' P FAD sing 208 n n P O1P FAD doub 209 n n P O2P FAD sing 210 n n P O3P FAD sing 211 n n O2P HOP2 FAD sing 212 n n # _atom_sites.entry_id 6SLT _atom_sites.fract_transf_matrix[1][1] 0.007233 _atom_sites.fract_transf_matrix[1][2] 0.004176 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008352 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007042 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 601 601 GOL GOL . D 2 GOL A 1 602 701 GOL GOL . E 2 GOL A 1 603 801 GOL GOL . F 2 GOL A 1 604 901 GOL GOL . G 2 GOL A 1 605 1001 GOL GOL . H 3 PO4 A 1 606 1 PO4 PO4 . I 3 PO4 A 1 607 3 PO4 PO4 . J 4 TRP A 1 608 1 TRP TRP . K 5 AMP A 1 609 1 AMP AMP . L 2 GOL B 1 601 601 GOL GOL . M 3 PO4 B 1 602 2 PO4 PO4 . N 6 FAD B 1 603 601 FAD FAD . O 7 HOH A 1 701 41 HOH HOH . O 7 HOH A 2 702 31 HOH HOH . O 7 HOH A 3 703 46 HOH HOH . O 7 HOH A 4 704 68 HOH HOH . O 7 HOH A 5 705 62 HOH HOH . O 7 HOH A 6 706 52 HOH HOH . O 7 HOH A 7 707 47 HOH HOH . O 7 HOH A 8 708 53 HOH HOH . O 7 HOH A 9 709 18 HOH HOH . O 7 HOH A 10 710 3 HOH HOH . O 7 HOH A 11 711 30 HOH HOH . O 7 HOH A 12 712 48 HOH HOH . O 7 HOH A 13 713 21 HOH HOH . O 7 HOH A 14 714 29 HOH HOH . O 7 HOH A 15 715 5 HOH HOH . O 7 HOH A 16 716 28 HOH HOH . O 7 HOH A 17 717 61 HOH HOH . O 7 HOH A 18 718 67 HOH HOH . O 7 HOH A 19 719 54 HOH HOH . O 7 HOH A 20 720 43 HOH HOH . O 7 HOH A 21 721 10 HOH HOH . O 7 HOH A 22 722 45 HOH HOH . O 7 HOH A 23 723 6 HOH HOH . O 7 HOH A 24 724 57 HOH HOH . O 7 HOH A 25 725 69 HOH HOH . O 7 HOH A 26 726 59 HOH HOH . O 7 HOH A 27 727 66 HOH HOH . O 7 HOH A 28 728 27 HOH HOH . O 7 HOH A 29 729 19 HOH HOH . O 7 HOH A 30 730 17 HOH HOH . O 7 HOH A 31 731 23 HOH HOH . O 7 HOH A 32 732 74 HOH HOH . O 7 HOH A 33 733 35 HOH HOH . O 7 HOH A 34 734 44 HOH HOH . O 7 HOH A 35 735 26 HOH HOH . O 7 HOH A 36 736 75 HOH HOH . O 7 HOH A 37 737 24 HOH HOH . O 7 HOH A 38 738 71 HOH HOH . O 7 HOH A 39 739 13 HOH HOH . O 7 HOH A 40 740 9 HOH HOH . O 7 HOH A 41 741 4 HOH HOH . O 7 HOH A 42 742 7 HOH HOH . O 7 HOH A 43 743 65 HOH HOH . O 7 HOH A 44 744 20 HOH HOH . O 7 HOH A 45 745 16 HOH HOH . O 7 HOH A 46 746 1 HOH HOH . O 7 HOH A 47 747 22 HOH HOH . O 7 HOH A 48 748 38 HOH HOH . O 7 HOH A 49 749 70 HOH HOH . O 7 HOH A 50 750 25 HOH HOH . O 7 HOH A 51 751 42 HOH HOH . P 7 HOH B 1 701 12 HOH HOH . P 7 HOH B 2 702 64 HOH HOH . P 7 HOH B 3 703 50 HOH HOH . P 7 HOH B 4 704 55 HOH HOH . P 7 HOH B 5 705 2 HOH HOH . P 7 HOH B 6 706 36 HOH HOH . P 7 HOH B 7 707 51 HOH HOH . P 7 HOH B 8 708 73 HOH HOH . P 7 HOH B 9 709 32 HOH HOH . P 7 HOH B 10 710 39 HOH HOH . P 7 HOH B 11 711 37 HOH HOH . P 7 HOH B 12 712 33 HOH HOH . P 7 HOH B 13 713 56 HOH HOH . P 7 HOH B 14 714 11 HOH HOH . P 7 HOH B 15 715 14 HOH HOH . P 7 HOH B 16 716 40 HOH HOH . P 7 HOH B 17 717 60 HOH HOH . P 7 HOH B 18 718 49 HOH HOH . P 7 HOH B 19 719 72 HOH HOH . P 7 HOH B 20 720 15 HOH HOH . P 7 HOH B 21 721 34 HOH HOH . P 7 HOH B 22 722 63 HOH HOH . P 7 HOH B 23 723 8 HOH HOH . P 7 HOH B 24 724 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . N 6 -20.332 -90.563 -29.005 0.93 99.23 ? PA FAD 603 B 1 HETATM 2 O O1A FAD . . . N 6 -19.355 -91.385 -28.21 0.93 74.08 ? O1A FAD 603 B 1 HETATM 3 O O2A FAD . . . N 6 -20.702 -90.892 -30.424 0.93 87.64 ? O2A FAD 603 B 1 HETATM 4 O O5B FAD . . . N 6 -21.663 -90.443 -28.125 0.93 106.53 ? O5B FAD 603 B 1 HETATM 5 C C5B FAD . . . N 6 -22.961 -90.573 -28.751 0.93 107.34 ? C5B FAD 603 B 1 HETATM 6 C C4B FAD . . . N 6 -23.98 -90.698 -27.652 0.93 101.15 ? C4B FAD 603 B 1 HETATM 7 O O4B FAD . . . N 6 -25.288 -90.329 -28.162 0.93 97.4 ? O4B FAD 603 B 1 HETATM 8 C C3B FAD . . . N 6 -24.126 -92.111 -27.065 0.93 93.79 ? C3B FAD 603 B 1 HETATM 9 O O3B FAD . . . N 6 -24.058 -92.002 -25.648 0.93 81.68 ? O3B FAD 603 B 1 HETATM 10 C C2B FAD . . . N 6 -25.468 -92.562 -27.658 0.93 88.85 ? C2B FAD 603 B 1 HETATM 11 O O2B FAD . . . N 6 -26.204 -93.503 -26.917 0.93 81.81 ? O2B FAD 603 B 1 HETATM 12 C C1B FAD . . . N 6 -26.204 -91.24 -27.617 0.93 90.69 ? C1B FAD 603 B 1 HETATM 13 N N9A FAD . . . N 6 -27.409 -91.186 -28.358 0.93 93.01 ? N9A FAD 603 B 1 HETATM 14 C C8A FAD . . . N 6 -27.572 -90.988 -29.703 0.93 100.01 ? C8A FAD 603 B 1 HETATM 15 N N7A FAD . . . N 6 -28.836 -90.951 -30.053 0.93 98.89 ? N7A FAD 603 B 1 HETATM 16 C C5A FAD . . . N 6 -29.532 -91.127 -28.861 0.93 106.12 ? C5A FAD 603 B 1 HETATM 17 C C6A FAD . . . N 6 -30.903 -91.188 -28.553 0.93 89.69 ? C6A FAD 603 B 1 HETATM 18 N N6A FAD . . . N 6 -31.862 -91.058 -29.455 0.93 82.23 ? N6A FAD 603 B 1 HETATM 19 N N1A FAD . . . N 6 -31.251 -91.361 -27.259 0.93 82.59 ? N1A FAD 603 B 1 HETATM 20 C C2A FAD . . . N 6 -30.28 -91.486 -26.346 0.93 87.02 ? C2A FAD 603 B 1 HETATM 21 N N3A FAD . . . N 6 -28.962 -91.46 -26.513 0.93 88.51 ? N3A FAD 603 B 1 HETATM 22 C C4A FAD . . . N 6 -28.655 -91.27 -27.808 0.93 101.66 ? C4A FAD 603 B 1 HETATM 23 N N1 FAD . . . N 6 -9.997 -87.984 -29.022 0.93 101.29 ? N1 FAD 603 B 1 HETATM 24 C C2 FAD . . . N 6 -8.83 -87.882 -28.348 0.93 97.82 ? C2 FAD 603 B 1 HETATM 25 O O2 FAD . . . N 6 -8.685 -87.039 -27.447 0.93 82.93 ? O2 FAD 603 B 1 HETATM 26 N N3 FAD . . . N 6 -7.788 -88.748 -28.593 0.93 106.83 ? N3 FAD 603 B 1 HETATM 27 C C4 FAD . . . N 6 -7.844 -89.706 -29.581 0.93 106.18 ? C4 FAD 603 B 1 HETATM 28 O O4 FAD . . . N 6 -6.89 -90.458 -29.754 0.93 107.47 ? O4 FAD 603 B 1 HETATM 29 C C4X FAD . . . N 6 -9.038 -89.8 -30.336 0.93 101.25 ? C4X FAD 603 B 1 HETATM 30 N N5 FAD . . . N 6 -9.114 -90.701 -31.284 0.93 102.4 ? N5 FAD 603 B 1 HETATM 31 C C5X FAD . . . N 6 -10.269 -90.747 -32.025 0.93 91.41 ? C5X FAD 603 B 1 HETATM 32 C C6 FAD . . . N 6 -10.344 -91.671 -33.081 0.93 84.26 ? C6 FAD 603 B 1 HETATM 33 C C7 FAD . . . N 6 -11.452 -91.756 -33.888 0.93 87.81 ? C7 FAD 603 B 1 HETATM 34 C C7M FAD . . . N 6 -11.483 -92.766 -35.004 0.93 90.09 ? C7M FAD 603 B 1 HETATM 35 C C8 FAD . . . N 6 -12.567 -90.928 -33.621 0.93 93.52 ? C8 FAD 603 B 1 HETATM 36 C C8M FAD . . . N 6 -13.825 -91.021 -34.444 0.93 99.91 ? C8M FAD 603 B 1 HETATM 37 C C9 FAD . . . N 6 -12.524 -90.049 -32.566 0.93 107.98 ? C9 FAD 603 B 1 HETATM 38 C C9A FAD . . . N 6 -11.375 -89.911 -31.767 0.93 100.84 ? C9A FAD 603 B 1 HETATM 39 N N10 FAD . . . N 6 -11.275 -88.982 -30.727 0.93 110.57 ? N10 FAD 603 B 1 HETATM 40 C C10 FAD . . . N 6 -10.097 -88.882 -29.986 0.93 108.34 ? C10 FAD 603 B 1 HETATM 41 C C1' FAD . . . N 6 -12.445 -88.157 -30.345 0.93 110.77 ? C1' FAD 603 B 1 HETATM 42 C C2' FAD . . . N 6 -13.116 -88.769 -29.069 0.93 98.25 ? C2' FAD 603 B 1 HETATM 43 O O2' FAD . . . N 6 -13.201 -90.188 -29.212 0.93 110.5 ? O2' FAD 603 B 1 HETATM 44 C C3' FAD . . . N 6 -14.522 -88.281 -28.714 0.93 85.06 ? C3' FAD 603 B 1 HETATM 45 O O3' FAD . . . N 6 -14.44 -86.882 -28.655 0.93 66.79 ? O3' FAD 603 B 1 HETATM 46 C C4' FAD . . . N 6 -15.12 -88.834 -27.403 0.93 90.97 ? C4' FAD 603 B 1 HETATM 47 O O4' FAD . . . N 6 -14.454 -90.028 -26.953 0.93 83.54 ? O4' FAD 603 B 1 HETATM 48 C C5' FAD . . . N 6 -16.601 -89.16 -27.494 0.93 88.68 ? C5' FAD 603 B 1 HETATM 49 O O5' FAD . . . N 6 -17.381 -88.238 -28.349 0.93 91.3 ? O5' FAD 603 B 1 HETATM 50 P P FAD . . . N 6 -18.975 -88.02 -28.093 0.93 93.58 ? P FAD 603 B 1 HETATM 51 O O1P FAD . . . N 6 -19.185 -88.503 -26.683 0.93 63.14 ? O1P FAD 603 B 1 HETATM 52 O O2P FAD . . . N 6 -19.379 -86.668 -28.612 0.93 88.98 ? O2P FAD 603 B 1 HETATM 53 O O3P FAD . . . N 6 -19.777 -89.041 -29.058 0.93 101.18 ? O3P FAD 603 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 367 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 53 #