data_6SLT
#
_model_server_result.job_id            jgUiZ4pHc8yM7nZfP1duxg 
_model_server_result.datetime_utc      '2024-11-15 08:00:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6slt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":609}' 
#
_entry.id    6SLT 
#
_exptl.entry_id    6SLT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6SLT 
_cell.length_a            138.25 
_cell.length_b            138.25 
_cell.length_c            142.01 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SLT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 13 n n 
P O2P AMP sing 14 n n 
P O3P AMP sing 15 n n 
P O5' AMP sing 16 n n 
O2P HOP2 AMP sing 17 n n 
O3P HOP3 AMP sing 18 n n 
O5' C5' AMP sing 19 n n 
C5' C4' AMP sing 20 n n 
C5' "H5'1" AMP sing 21 n n 
C5' "H5'2" AMP sing 22 n n 
C4' O4' AMP sing 23 n n 
C4' C3' AMP sing 24 n n 
C4' H4' AMP sing 25 n n 
O4' C1' AMP sing 26 n n 
C3' O3' AMP sing 27 n n 
C3' C2' AMP sing 28 n n 
C3' H3' AMP sing 29 n n 
O3' HO3' AMP sing 30 n n 
C2' O2' AMP sing 31 n n 
C2' C1' AMP sing 32 n n 
C2' H2' AMP sing 33 n n 
O2' HO2' AMP sing 34 n n 
C1' N9 AMP sing 35 n n 
C1' H1' AMP sing 36 n n 
N9 C8 AMP sing 37 n y 
N9 C4 AMP sing 38 n y 
C8 N7 AMP doub 39 n y 
C8 H8 AMP sing 40 n n 
N7 C5 AMP sing 41 n y 
C5 C6 AMP sing 42 n y 
C5 C4 AMP doub 43 n y 
C6 N6 AMP sing 44 n n 
C6 N1 AMP doub 45 n y 
N6 HN61 AMP sing 46 n n 
N6 HN62 AMP sing 47 n n 
N1 C2 AMP sing 48 n y 
C2 N3 AMP doub 49 n y 
C2 H2 AMP sing 50 n n 
N3 C4 AMP sing 51 n y 
#
_atom_sites.entry_id                     6SLT 
_atom_sites.fract_transf_matrix[1][1]    0.007233 
_atom_sites.fract_transf_matrix[1][2]    0.004176 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008352 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007042 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 601 601 GOL GOL . 
D 2 GOL A 1 602 701 GOL GOL . 
E 2 GOL A 1 603 801 GOL GOL . 
F 2 GOL A 1 604 901 GOL GOL . 
G 2 GOL A 1 605 1001 GOL GOL . 
H 3 PO4 A 1 606 1 PO4 PO4 . 
I 3 PO4 A 1 607 3 PO4 PO4 . 
J 4 TRP A 1 608 1 TRP TRP . 
K 5 AMP A 1 609 1 AMP AMP . 
L 2 GOL B 1 601 601 GOL GOL . 
M 3 PO4 B 1 602 2 PO4 PO4 . 
N 6 FAD B 1 603 601 FAD FAD . 
O 7 HOH A 1 701 41 HOH HOH . 
O 7 HOH A 2 702 31 HOH HOH . 
O 7 HOH A 3 703 46 HOH HOH . 
O 7 HOH A 4 704 68 HOH HOH . 
O 7 HOH A 5 705 62 HOH HOH . 
O 7 HOH A 6 706 52 HOH HOH . 
O 7 HOH A 7 707 47 HOH HOH . 
O 7 HOH A 8 708 53 HOH HOH . 
O 7 HOH A 9 709 18 HOH HOH . 
O 7 HOH A 10 710 3 HOH HOH . 
O 7 HOH A 11 711 30 HOH HOH . 
O 7 HOH A 12 712 48 HOH HOH . 
O 7 HOH A 13 713 21 HOH HOH . 
O 7 HOH A 14 714 29 HOH HOH . 
O 7 HOH A 15 715 5 HOH HOH . 
O 7 HOH A 16 716 28 HOH HOH . 
O 7 HOH A 17 717 61 HOH HOH . 
O 7 HOH A 18 718 67 HOH HOH . 
O 7 HOH A 19 719 54 HOH HOH . 
O 7 HOH A 20 720 43 HOH HOH . 
O 7 HOH A 21 721 10 HOH HOH . 
O 7 HOH A 22 722 45 HOH HOH . 
O 7 HOH A 23 723 6 HOH HOH . 
O 7 HOH A 24 724 57 HOH HOH . 
O 7 HOH A 25 725 69 HOH HOH . 
O 7 HOH A 26 726 59 HOH HOH . 
O 7 HOH A 27 727 66 HOH HOH . 
O 7 HOH A 28 728 27 HOH HOH . 
O 7 HOH A 29 729 19 HOH HOH . 
O 7 HOH A 30 730 17 HOH HOH . 
O 7 HOH A 31 731 23 HOH HOH . 
O 7 HOH A 32 732 74 HOH HOH . 
O 7 HOH A 33 733 35 HOH HOH . 
O 7 HOH A 34 734 44 HOH HOH . 
O 7 HOH A 35 735 26 HOH HOH . 
O 7 HOH A 36 736 75 HOH HOH . 
O 7 HOH A 37 737 24 HOH HOH . 
O 7 HOH A 38 738 71 HOH HOH . 
O 7 HOH A 39 739 13 HOH HOH . 
O 7 HOH A 40 740 9 HOH HOH . 
O 7 HOH A 41 741 4 HOH HOH . 
O 7 HOH A 42 742 7 HOH HOH . 
O 7 HOH A 43 743 65 HOH HOH . 
O 7 HOH A 44 744 20 HOH HOH . 
O 7 HOH A 45 745 16 HOH HOH . 
O 7 HOH A 46 746 1 HOH HOH . 
O 7 HOH A 47 747 22 HOH HOH . 
O 7 HOH A 48 748 38 HOH HOH . 
O 7 HOH A 49 749 70 HOH HOH . 
O 7 HOH A 50 750 25 HOH HOH . 
O 7 HOH A 51 751 42 HOH HOH . 
P 7 HOH B 1 701 12 HOH HOH . 
P 7 HOH B 2 702 64 HOH HOH . 
P 7 HOH B 3 703 50 HOH HOH . 
P 7 HOH B 4 704 55 HOH HOH . 
P 7 HOH B 5 705 2 HOH HOH . 
P 7 HOH B 6 706 36 HOH HOH . 
P 7 HOH B 7 707 51 HOH HOH . 
P 7 HOH B 8 708 73 HOH HOH . 
P 7 HOH B 9 709 32 HOH HOH . 
P 7 HOH B 10 710 39 HOH HOH . 
P 7 HOH B 11 711 37 HOH HOH . 
P 7 HOH B 12 712 33 HOH HOH . 
P 7 HOH B 13 713 56 HOH HOH . 
P 7 HOH B 14 714 11 HOH HOH . 
P 7 HOH B 15 715 14 HOH HOH . 
P 7 HOH B 16 716 40 HOH HOH . 
P 7 HOH B 17 717 60 HOH HOH . 
P 7 HOH B 18 718 49 HOH HOH . 
P 7 HOH B 19 719 72 HOH HOH . 
P 7 HOH B 20 720 15 HOH HOH . 
P 7 HOH B 21 721 34 HOH HOH . 
P 7 HOH B 22 722 63 HOH HOH . 
P 7 HOH B 23 723 8 HOH HOH . 
P 7 HOH B 24 724 58 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . K 5 12.99 -33.076 -33.17 0.96 138.8 ? P AMP 609 A 1 
HETATM 2 O O1P AMP . . . K 5 12.743 -31.825 -34.022 0.96 106.86 ? O1P AMP 609 A 1 
HETATM 3 O O2P AMP . . . K 5 13.465 -32.723 -31.767 0.96 148.31 ? O2P AMP 609 A 1 
HETATM 4 O O3P AMP . . . K 5 11.823 -34.063 -33.179 0.96 137.98 ? O3P AMP 609 A 1 
HETATM 5 O O5' AMP . . . K 5 14.215 -33.895 -33.862 0.96 137.91 ? O5' AMP 609 A 1 
HETATM 6 C C5' AMP . . . K 5 14.581 -35.219 -33.367 0.96 129.54 ? C5' AMP 609 A 1 
HETATM 7 C C4' AMP . . . K 5 16.075 -35.415 -33.504 0.96 129.85 ? C4' AMP 609 A 1 
HETATM 8 O O4' AMP . . . K 5 16.431 -35.458 -34.913 0.96 127.71 ? O4' AMP 609 A 1 
HETATM 9 C C3' AMP . . . K 5 16.976 -34.321 -32.896 0.96 124.79 ? C3' AMP 609 A 1 
HETATM 10 O O3' AMP . . . K 5 18.122 -34.872 -32.261 0.96 120.54 ? O3' AMP 609 A 1 
HETATM 11 C C2' AMP . . . K 5 17.382 -33.492 -34.12 0.96 120.13 ? C2' AMP 609 A 1 
HETATM 12 O O2' AMP . . . K 5 18.566 -32.733 -33.99 0.96 114.14 ? O2' AMP 609 A 1 
HETATM 13 C C1' AMP . . . K 5 17.539 -34.613 -35.136 0.96 112.18 ? C1' AMP 609 A 1 
HETATM 14 N N9 AMP . . . K 5 17.524 -34.15 -36.515 0.96 100.56 ? N9 AMP 609 A 1 
HETATM 15 C C8 AMP . . . K 5 16.454 -33.654 -37.216 0.96 107.46 ? C8 AMP 609 A 1 
HETATM 16 N N7 AMP . . . K 5 16.749 -33.294 -38.44 0.96 95.76 ? N7 AMP 609 A 1 
HETATM 17 C C5 AMP . . . K 5 18.103 -33.569 -38.552 0.96 91.74 ? C5 AMP 609 A 1 
HETATM 18 C C6 AMP . . . K 5 19.015 -33.408 -39.612 0.96 86.42 ? C6 AMP 609 A 1 
HETATM 19 N N6 AMP . . . K 5 18.704 -32.907 -40.802 0.96 82.39 ? N6 AMP 609 A 1 
HETATM 20 N N1 AMP . . . K 5 20.292 -33.783 -39.388 0.96 94.71 ? N1 AMP 609 A 1 
HETATM 21 C C2 AMP . . . K 5 20.611 -34.28 -38.184 0.96 101.22 ? C2 AMP 609 A 1 
HETATM 22 N N3 AMP . . . K 5 19.844 -34.47 -37.115 0.96 92.8 ? N3 AMP 609 A 1 
HETATM 23 C C4 AMP . . . K 5 18.587 -34.092 -37.369 0.96 89.13 ? C4 AMP 609 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           23 
#