data_6SNI
#
_model_server_result.job_id            UhlJA5uNjQ11KJ2tmz6lYw 
_model_server_result.datetime_utc      '2025-03-04 09:25:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sni 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1606}' 
#
_entry.id    6SNI 
#
_exptl.entry_id    6SNI 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6SNI 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SNI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 J N N 
? 5 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 332 X CYS 314 1_555 A SG CYS 533 X CYS 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf2 B SG CYS 25 H CYS 22 1_555 B SG CYS 99 H CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 B SG CYS 153 H CYS 149 1_555 B SG CYS 209 H CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf4 C SG CYS 24 L CYS 23 1_555 C SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf5 C SG CYS 137 L CYS 136 1_555 C SG CYS 197 L CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 505 n n 
CBA CAB Y01 sing 506 n n 
CBA CAN Y01 sing 507 n n 
CAN CAJ Y01 sing 508 n n 
CAJ CAO Y01 sing 509 n n 
CAO CBB Y01 sing 510 n n 
CBB CAC Y01 sing 511 n n 
CBB CBE Y01 sing 512 n n 
CBE CAP Y01 sing 513 n n 
CBE CBI Y01 sing 514 n n 
CAP CAQ Y01 sing 515 n n 
CAQ CBG Y01 sing 516 n n 
CBG CBI Y01 sing 517 n n 
CBG CBD Y01 sing 518 n n 
CBI CAE Y01 sing 519 n n 
CBI CAU Y01 sing 520 n n 
CAU CAS Y01 sing 521 n n 
CAS CBF Y01 sing 522 n n 
CBF CBD Y01 sing 523 n n 
CBF CBH Y01 sing 524 n n 
CBD CAK Y01 sing 525 n n 
CAK CAI Y01 sing 526 n n 
CAI CAZ Y01 doub 527 n n 
CAZ CAV Y01 sing 528 n n 
CAZ CBH Y01 sing 529 n n 
CAV CBC Y01 sing 530 n n 
CBH CAD Y01 sing 531 n n 
CBH CAT Y01 sing 532 n n 
CAT CAR Y01 sing 533 n n 
CAR CBC Y01 sing 534 n n 
CBC OAW Y01 sing 535 n n 
OAW CAY Y01 sing 536 n n 
CAY OAG Y01 doub 537 n n 
CAY CAM Y01 sing 538 n n 
CAM CAL Y01 sing 539 n n 
CAL CAX Y01 sing 540 n n 
CAX OAH Y01 sing 541 n n 
CAX OAF Y01 doub 542 n n 
CAA HAA1 Y01 sing 543 n n 
CAA HAA2 Y01 sing 544 n n 
CAA HAA3 Y01 sing 545 n n 
CBA HBA Y01 sing 546 n n 
CAB HAB1 Y01 sing 547 n n 
CAB HAB2 Y01 sing 548 n n 
CAB HAB3 Y01 sing 549 n n 
CAN HAN1 Y01 sing 550 n n 
CAN HAN2 Y01 sing 551 n n 
CAJ HAJ1 Y01 sing 552 n n 
CAJ HAJ2 Y01 sing 553 n n 
CAO HAO1 Y01 sing 554 n n 
CAO HAO2 Y01 sing 555 n n 
CBB HBB Y01 sing 556 n n 
CAC HAC1 Y01 sing 557 n n 
CAC HAC2 Y01 sing 558 n n 
CAC HAC3 Y01 sing 559 n n 
CBE HBE Y01 sing 560 n n 
CAP HAP1 Y01 sing 561 n n 
CAP HAP2 Y01 sing 562 n n 
CAQ HAQ1 Y01 sing 563 n n 
CAQ HAQ2 Y01 sing 564 n n 
CBG HBG Y01 sing 565 n n 
CBD HBD Y01 sing 566 n n 
CAE HAE1 Y01 sing 567 n n 
CAE HAE2 Y01 sing 568 n n 
CAE HAE3 Y01 sing 569 n n 
CAU HAU1 Y01 sing 570 n n 
CAU HAU2 Y01 sing 571 n n 
CAS HAS1 Y01 sing 572 n n 
CAS HAS2 Y01 sing 573 n n 
CBF HBF Y01 sing 574 n n 
CAK HAK1 Y01 sing 575 n n 
CAK HAK2 Y01 sing 576 n n 
CAI HAI Y01 sing 577 n n 
CAV HAV1 Y01 sing 578 n n 
CAV HAV2 Y01 sing 579 n n 
CBC HBC Y01 sing 580 n n 
CAD HAD1 Y01 sing 581 n n 
CAD HAD2 Y01 sing 582 n n 
CAD HAD3 Y01 sing 583 n n 
CAT HAT1 Y01 sing 584 n n 
CAT HAT2 Y01 sing 585 n n 
CAR HAR1 Y01 sing 586 n n 
CAR HAR2 Y01 sing 587 n n 
CAM HAM1 Y01 sing 588 n n 
CAM HAM2 Y01 sing 589 n n 
CAL HAL1 Y01 sing 590 n n 
CAL HAL2 Y01 sing 591 n n 
OAH HAH Y01 sing 592 n n 
#
_atom_sites.entry_id                     6SNI 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 PTY X 1 1601 1601 PTY PTY . 
E 4 PTY X 1 1602 1701 PTY PTY . 
F 4 PTY X 1 1603 1801 PTY PTY . 
G 4 PTY X 1 1604 1901 PTY PTY . 
H 4 PTY X 1 1605 2001 PTY PTY . 
I 5 Y01 X 1 1606 2401 Y01 Y01 . 
J 5 Y01 H 1 2201 2201 Y01 Y01 . 
K 5 Y01 H 1 2202 2301 Y01 Y01 . 
L 6 HOH X 1 1701 1 HOH HOH . 
L 6 HOH X 2 1702 4 HOH HOH . 
L 6 HOH X 3 1703 6 HOH HOH . 
L 6 HOH X 4 1704 8 HOH HOH . 
L 6 HOH X 5 1705 7 HOH HOH . 
L 6 HOH X 6 1706 9 HOH HOH . 
M 6 HOH H 1 2301 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . I 5 121.311 143.361 133.076 1 38.8 ? CAA Y01 1606 X 1 
HETATM 2 C CBA Y01 . . . I 5 122.182 142.263 132.426 1 38.8 ? CBA Y01 1606 X 1 
HETATM 3 C CAB Y01 . . . I 5 122.665 141.276 133.483 1 38.8 ? CAB Y01 1606 X 1 
HETATM 4 C CAN Y01 . . . I 5 121.386 141.573 131.28 1 38.8 ? CAN Y01 1606 X 1 
HETATM 5 C CAJ Y01 . . . I 5 120.342 140.518 131.816 1 38.8 ? CAJ Y01 1606 X 1 
HETATM 6 C CAO Y01 . . . I 5 119.913 139.537 130.66 1 38.8 ? CAO Y01 1606 X 1 
HETATM 7 C CBB Y01 . . . I 5 121.142 138.566 130.259 1 38.8 ? CBB Y01 1606 X 1 
HETATM 8 C CAC Y01 . . . I 5 121.445 137.749 131.561 1 38.8 ? CAC Y01 1606 X 1 
HETATM 9 C CBE Y01 . . . I 5 120.794 137.786 129.162 1 38.8 ? CBE Y01 1606 X 1 
HETATM 10 C CAP Y01 . . . I 5 120.591 138.811 127.89 1 38.8 ? CAP Y01 1606 X 1 
HETATM 11 C CAQ Y01 . . . I 5 121.844 138.352 126.695 1 38.8 ? CAQ Y01 1606 X 1 
HETATM 12 C CBG Y01 . . . I 5 122.014 136.706 126.984 1 38.8 ? CBG Y01 1606 X 1 
HETATM 13 C CBI Y01 . . . I 5 121.916 136.613 128.662 1 38.8 ? CBI Y01 1606 X 1 
HETATM 14 C CAE Y01 . . . I 5 123.274 137.109 129.186 1 38.8 ? CAE Y01 1606 X 1 
HETATM 15 C CAU Y01 . . . I 5 121.78 135.502 129.01 1 38.8 ? CAU Y01 1606 X 1 
HETATM 16 C CAS Y01 . . . I 5 122.503 134.605 128.428 1 38.8 ? CAS Y01 1606 X 1 
HETATM 17 C CBF Y01 . . . I 5 122.829 134.845 126.853 1 38.8 ? CBF Y01 1606 X 1 
HETATM 18 C CBD Y01 . . . I 5 122.855 136.067 126.487 1 38.8 ? CBD Y01 1606 X 1 
HETATM 19 C CAK Y01 . . . I 5 122.914 136.176 125.332 1 38.8 ? CAK Y01 1606 X 1 
HETATM 20 C CAI Y01 . . . I 5 123.937 135.054 124.598 1 38.8 ? CAI Y01 1606 X 1 
HETATM 21 C CAZ Y01 . . . I 5 124.662 134.301 125.349 1 38.8 ? CAZ Y01 1606 X 1 
HETATM 22 C CAV Y01 . . . I 5 125.685 133.265 124.714 1 38.8 ? CAV Y01 1606 X 1 
HETATM 23 C CBH Y01 . . . I 5 124.266 134.032 126.475 1 38.8 ? CBH Y01 1606 X 1 
HETATM 24 C CAD Y01 . . . I 5 125.376 134.452 127.461 1 38.8 ? CAD Y01 1606 X 1 
HETATM 25 C CAT Y01 . . . I 5 124.008 132.417 126.759 1 38.8 ? CAT Y01 1606 X 1 
HETATM 26 C CAR Y01 . . . I 5 125.038 131.525 126.131 1 38.8 ? CAR Y01 1606 X 1 
HETATM 27 C CBC Y01 . . . I 5 125.128 131.817 124.854 1 38.8 ? CBC Y01 1606 X 1 
HETATM 28 O OAW Y01 . . . I 5 126.026 130.849 124.112 1 38.8 ? OAW Y01 1606 X 1 
HETATM 29 C CAY Y01 . . . I 5 125.919 130.983 122.716 1 38.8 ? CAY Y01 1606 X 1 
HETATM 30 O OAG Y01 . . . I 5 126.89 131.188 122.067 1 38.8 ? OAG Y01 1606 X 1 
HETATM 31 C CAM Y01 . . . I 5 124.534 130.878 122.027 1 38.8 ? CAM Y01 1606 X 1 
HETATM 32 C CAL Y01 . . . I 5 123.945 132.308 121.815 1 38.8 ? CAL Y01 1606 X 1 
HETATM 33 C CAX Y01 . . . I 5 122.968 132.329 120.61 1 38.8 ? CAX Y01 1606 X 1 
HETATM 34 O OAH Y01 . . . I 5 121.741 132.091 120.79 1 38.8 ? OAH Y01 1606 X 1 
HETATM 35 O OAF Y01 . . . I 5 123.4 132.587 119.449 1 38.8 ? OAF Y01 1606 X 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           35 
#