data_6SNL
#
_model_server_result.job_id            ip6A91v1vfuHd1ibRK5aLw 
_model_server_result.datetime_utc      '2024-11-25 01:38:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6snl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":403}' 
#
_entry.id    6SNL 
#
_exptl.entry_id    6SNL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.331 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'HEXAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6SNL 
_cell.length_a            115.113 
_cell.length_b            301.521 
_cell.length_c            140.657 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SNL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,G,H,N,R 1 1 
B,I,J,S 2 1 
E,O,U 2 2 
C,F,K,L,M,P,Q,T,V 3 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_445 -x-1/2,-y-1/2,z+1/2 -1 0 0 0 -1 0 0 0 1 -57.5565 -150.7605 70.3285 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             M 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 179 A LYS 179 1_555 G C4A PLP . A PLP 401 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.429 ? 
covale ? covale2 B NZ LYS 179 B LYS 179 1_555 I C4A PLP . B PLP 401 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.429 ? 
covale ? covale3 C NZ LYS 179 C LYS 179 1_555 K C4A PLP . C PLP 401 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.432 ? 
covale ? covale4 D NZ LYS 179 D LYS 179 1_555 N C4A PLP . D PLP 401 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.431 ? 
covale ? covale5 E NZ LYS 179 E LYS 179 1_555 O C4A PLP . E PLP 401 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.43 ? 
covale ? covale6 F NZ LYS 179 F LYS 179 1_555 P C4A PLP . F PLP 401 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.43 ? 
#
_chem_comp.formula           'C12 H26 O7' 
_chem_comp.formula_weight    282.331 
_chem_comp.id                P6G 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'HEXAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'POLYETHYLENE GLYCOL PEG400' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 P6G sing 250 n n 
O1 H1 P6G sing 251 n n 
C2 C3 P6G sing 252 n n 
C2 H21 P6G sing 253 n n 
C2 H22 P6G sing 254 n n 
C3 O4 P6G sing 255 n n 
C3 H31 P6G sing 256 n n 
C3 H32 P6G sing 257 n n 
O4 C5 P6G sing 258 n n 
C5 C6 P6G sing 259 n n 
C5 H51 P6G sing 260 n n 
C5 H52 P6G sing 261 n n 
C6 O7 P6G sing 262 n n 
C6 H61 P6G sing 263 n n 
C6 H62 P6G sing 264 n n 
O7 C8 P6G sing 265 n n 
C8 C9 P6G sing 266 n n 
C8 H81 P6G sing 267 n n 
C8 H82 P6G sing 268 n n 
C9 O10 P6G sing 269 n n 
C9 H91 P6G sing 270 n n 
C9 H92 P6G sing 271 n n 
O10 C11 P6G sing 272 n n 
C11 C12 P6G sing 273 n n 
C11 H111 P6G sing 274 n n 
C11 H112 P6G sing 275 n n 
C12 O13 P6G sing 276 n n 
C12 H121 P6G sing 277 n n 
C12 H122 P6G sing 278 n n 
O13 C14 P6G sing 279 n n 
C14 C15 P6G sing 280 n n 
C14 H141 P6G sing 281 n n 
C14 H142 P6G sing 282 n n 
C15 O16 P6G sing 283 n n 
C15 H151 P6G sing 284 n n 
C15 H152 P6G sing 285 n n 
O16 C17 P6G sing 286 n n 
C17 C18 P6G sing 287 n n 
C17 H171 P6G sing 288 n n 
C17 H172 P6G sing 289 n n 
C18 O19 P6G sing 290 n n 
C18 H181 P6G sing 291 n n 
C18 H182 P6G sing 292 n n 
O19 H19 P6G sing 293 n n 
#
_atom_sites.entry_id                     6SNL 
_atom_sites.fract_transf_matrix[1][1]    0.008687 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003317 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007109 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 PLP A 1 401 1180 PLP PLP . 
H 3 GOL A 1 402 2 GOL GOL . 
I 2 PLP B 1 401 1180 PLP PLP . 
J 3 GOL B 1 402 1 GOL GOL . 
K 2 PLP C 1 401 1180 PLP PLP . 
L 4 CL C 1 402 1 CL CL . 
M 5 P6G C 1 403 1 P6G P6G . 
N 2 PLP D 1 401 1180 PLP PLP . 
O 2 PLP E 1 401 1180 PLP PLP . 
P 2 PLP F 1 401 1180 PLP PLP . 
Q 4 CL F 1 402 2 CL CL . 
R 6 HOH A 1 501 11 HOH HOH . 
R 6 HOH A 2 502 9 HOH HOH . 
R 6 HOH A 3 503 19 HOH HOH . 
S 6 HOH B 1 501 17 HOH HOH . 
T 6 HOH C 1 501 1 HOH HOH . 
T 6 HOH C 2 502 2 HOH HOH . 
U 6 HOH E 1 501 18 HOH HOH . 
U 6 HOH E 2 502 4 HOH HOH . 
U 6 HOH E 3 503 8 HOH HOH . 
U 6 HOH E 4 504 16 HOH HOH . 
V 6 HOH F 1 501 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 P6G . . . M 5 -63.92 -154.038 4.662 1 58.13 ? O1 P6G 403 C 1 
HETATM 2 C C2 P6G . . . M 5 -63.051 -154.346 3.618 1 59.39 ? C2 P6G 403 C 1 
HETATM 3 C C3 P6G . . . M 5 -63.122 -153.18 2.61 1 61.67 ? C3 P6G 403 C 1 
HETATM 4 O O4 P6G . . . M 5 -61.85 -152.569 2.582 1 59.48 ? O4 P6G 403 C 1 
HETATM 5 C C5 P6G . . . M 5 -61.174 -152.852 1.383 1 58.24 ? C5 P6G 403 C 1 
HETATM 6 C C6 P6G . . . M 5 -59.727 -153.173 1.736 1 58 ? C6 P6G 403 C 1 
HETATM 7 O O7 P6G . . . M 5 -59.678 -154.508 2.152 1 57.96 ? O7 P6G 403 C 1 
HETATM 8 C C8 P6G . . . M 5 -58.369 -154.891 2.445 1 56.7 ? C8 P6G 403 C 1 
HETATM 9 C C9 P6G . . . M 5 -58.356 -155.374 3.895 1 55.6 ? C9 P6G 403 C 1 
HETATM 10 O O10 P6G . . . M 5 -58.804 -154.311 4.713 1 57.55 ? O10 P6G 403 C 1 
HETATM 11 C C11 P6G . . . M 5 -59.264 -154.787 5.96 1 59.29 ? C11 P6G 403 C 1 
HETATM 12 C C12 P6G . . . M 5 -59.85 -153.609 6.767 1 58.08 ? C12 P6G 403 C 1 
HETATM 13 O O13 P6G . . . M 5 -60.295 -152.616 5.867 1 57.49 ? O13 P6G 403 C 1 
HETATM 14 C C14 P6G . . . M 5 -59.615 -151.407 6.101 1 55.77 ? C14 P6G 403 C 1 
HETATM 15 C C15 P6G . . . M 5 -60.596 -150.243 5.903 1 53.95 ? C15 P6G 403 C 1 
HETATM 16 O O16 P6G . . . M 5 -60.665 -149.929 4.525 1 57.43 ? O16 P6G 403 C 1 
HETATM 17 C C17 P6G . . . M 5 -59.389 -149.731 3.954 1 56.45 ? C17 P6G 403 C 1 
HETATM 18 C C18 P6G . . . M 5 -59.604 -149.117 2.561 1 55.9 ? C18 P6G 403 C 1 
HETATM 19 O O19 P6G . . . M 5 -58.516 -149.495 1.778 1 55.64 ? O19 P6G 403 C 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           19 
#