data_6SOT # _model_server_result.job_id o9RH3tI2vJOyUwIheXFYPQ _model_server_result.datetime_utc '2024-11-30 04:11:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sot # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":411}' # _entry.id 6SOT # _exptl.entry_id 6SOT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SOT _cell.length_a 46.001 _cell.length_b 85.815 _cell.length_c 127.218 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SOT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 K N N ? 6 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 176 A ASN 155 1_555 H MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc2 A OD2 ASP 189 A ASP 168 1_555 H MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc3 H MG MG . A MG 407 1_555 M O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc4 H MG MG . A MG 407 1_555 M O HOH . A HOH 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc5 H MG MG . A MG 407 1_555 M O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc6 H MG MG . A MG 407 1_555 M O HOH . A HOH 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6SOT _atom_sites.fract_transf_matrix[1][1] 0.021739 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011653 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007861 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LOQ A 1 401 401 LOQ LIG . C 3 CL A 1 402 3 CL CL . D 3 CL A 1 403 4 CL CL . E 3 CL A 1 404 5 CL CL . F 3 CL A 1 405 6 CL CL . G 3 CL A 1 406 7 CL CL . H 4 MG A 1 407 1 MG MG . I 5 SO4 A 1 408 1 SO4 SO4 . J 5 SO4 A 1 409 2 SO4 SO4 . K 6 EDO A 1 410 1 EDO EDO . L 6 EDO A 1 411 2 EDO EDO . M 7 HOH A 1 501 168 HOH HOH . M 7 HOH A 2 502 82 HOH HOH . M 7 HOH A 3 503 176 HOH HOH . M 7 HOH A 4 504 180 HOH HOH . M 7 HOH A 5 505 120 HOH HOH . M 7 HOH A 6 506 281 HOH HOH . M 7 HOH A 7 507 268 HOH HOH . M 7 HOH A 8 508 59 HOH HOH . M 7 HOH A 9 509 65 HOH HOH . M 7 HOH A 10 510 229 HOH HOH . M 7 HOH A 11 511 171 HOH HOH . M 7 HOH A 12 512 276 HOH HOH . M 7 HOH A 13 513 147 HOH HOH . M 7 HOH A 14 514 55 HOH HOH . M 7 HOH A 15 515 287 HOH HOH . M 7 HOH A 16 516 26 HOH HOH . M 7 HOH A 17 517 10 HOH HOH . M 7 HOH A 18 518 57 HOH HOH . M 7 HOH A 19 519 123 HOH HOH . M 7 HOH A 20 520 73 HOH HOH . M 7 HOH A 21 521 52 HOH HOH . M 7 HOH A 22 522 213 HOH HOH . M 7 HOH A 23 523 274 HOH HOH . M 7 HOH A 24 524 130 HOH HOH . M 7 HOH A 25 525 202 HOH HOH . M 7 HOH A 26 526 4 HOH HOH . M 7 HOH A 27 527 244 HOH HOH . M 7 HOH A 28 528 31 HOH HOH . M 7 HOH A 29 529 118 HOH HOH . M 7 HOH A 30 530 47 HOH HOH . M 7 HOH A 31 531 60 HOH HOH . M 7 HOH A 32 532 48 HOH HOH . M 7 HOH A 33 533 218 HOH HOH . M 7 HOH A 34 534 67 HOH HOH . M 7 HOH A 35 535 50 HOH HOH . M 7 HOH A 36 536 43 HOH HOH . M 7 HOH A 37 537 183 HOH HOH . M 7 HOH A 38 538 295 HOH HOH . M 7 HOH A 39 539 22 HOH HOH . M 7 HOH A 40 540 83 HOH HOH . M 7 HOH A 41 541 78 HOH HOH . M 7 HOH A 42 542 212 HOH HOH . M 7 HOH A 43 543 201 HOH HOH . M 7 HOH A 44 544 275 HOH HOH . M 7 HOH A 45 545 154 HOH HOH . M 7 HOH A 46 546 111 HOH HOH . M 7 HOH A 47 547 37 HOH HOH . M 7 HOH A 48 548 217 HOH HOH . M 7 HOH A 49 549 146 HOH HOH . M 7 HOH A 50 550 62 HOH HOH . M 7 HOH A 51 551 18 HOH HOH . M 7 HOH A 52 552 270 HOH HOH . M 7 HOH A 53 553 237 HOH HOH . M 7 HOH A 54 554 223 HOH HOH . M 7 HOH A 55 555 292 HOH HOH . M 7 HOH A 56 556 85 HOH HOH . M 7 HOH A 57 557 200 HOH HOH . M 7 HOH A 58 558 121 HOH HOH . M 7 HOH A 59 559 35 HOH HOH . M 7 HOH A 60 560 86 HOH HOH . M 7 HOH A 61 561 2 HOH HOH . M 7 HOH A 62 562 106 HOH HOH . M 7 HOH A 63 563 206 HOH HOH . M 7 HOH A 64 564 291 HOH HOH . M 7 HOH A 65 565 105 HOH HOH . M 7 HOH A 66 566 96 HOH HOH . M 7 HOH A 67 567 149 HOH HOH . M 7 HOH A 68 568 151 HOH HOH . M 7 HOH A 69 569 3 HOH HOH . M 7 HOH A 70 570 45 HOH HOH . M 7 HOH A 71 571 12 HOH HOH . M 7 HOH A 72 572 251 HOH HOH . M 7 HOH A 73 573 241 HOH HOH . M 7 HOH A 74 574 233 HOH HOH . M 7 HOH A 75 575 74 HOH HOH . M 7 HOH A 76 576 23 HOH HOH . M 7 HOH A 77 577 296 HOH HOH . M 7 HOH A 78 578 109 HOH HOH . M 7 HOH A 79 579 283 HOH HOH . M 7 HOH A 80 580 115 HOH HOH . M 7 HOH A 81 581 107 HOH HOH . M 7 HOH A 82 582 248 HOH HOH . M 7 HOH A 83 583 72 HOH HOH . M 7 HOH A 84 584 13 HOH HOH . M 7 HOH A 85 585 205 HOH HOH . M 7 HOH A 86 586 70 HOH HOH . M 7 HOH A 87 587 137 HOH HOH . M 7 HOH A 88 588 8 HOH HOH . M 7 HOH A 89 589 273 HOH HOH . M 7 HOH A 90 590 182 HOH HOH . M 7 HOH A 91 591 81 HOH HOH . M 7 HOH A 92 592 1 HOH HOH . M 7 HOH A 93 593 134 HOH HOH . M 7 HOH A 94 594 209 HOH HOH . M 7 HOH A 95 595 173 HOH HOH . M 7 HOH A 96 596 126 HOH HOH . M 7 HOH A 97 597 138 HOH HOH . M 7 HOH A 98 598 27 HOH HOH . M 7 HOH A 99 599 39 HOH HOH . M 7 HOH A 100 600 220 HOH HOH . M 7 HOH A 101 601 69 HOH HOH . M 7 HOH A 102 602 53 HOH HOH . M 7 HOH A 103 603 58 HOH HOH . M 7 HOH A 104 604 174 HOH HOH . M 7 HOH A 105 605 290 HOH HOH . M 7 HOH A 106 606 9 HOH HOH . M 7 HOH A 107 607 128 HOH HOH . M 7 HOH A 108 608 32 HOH HOH . M 7 HOH A 109 609 216 HOH HOH . M 7 HOH A 110 610 172 HOH HOH . M 7 HOH A 111 611 215 HOH HOH . M 7 HOH A 112 612 236 HOH HOH . M 7 HOH A 113 613 156 HOH HOH . M 7 HOH A 114 614 95 HOH HOH . M 7 HOH A 115 615 42 HOH HOH . M 7 HOH A 116 616 284 HOH HOH . M 7 HOH A 117 617 76 HOH HOH . M 7 HOH A 118 618 289 HOH HOH . M 7 HOH A 119 619 44 HOH HOH . M 7 HOH A 120 620 41 HOH HOH . M 7 HOH A 121 621 181 HOH HOH . M 7 HOH A 122 622 51 HOH HOH . M 7 HOH A 123 623 91 HOH HOH . M 7 HOH A 124 624 288 HOH HOH . M 7 HOH A 125 625 280 HOH HOH . M 7 HOH A 126 626 252 HOH HOH . M 7 HOH A 127 627 243 HOH HOH . M 7 HOH A 128 628 175 HOH HOH . M 7 HOH A 129 629 77 HOH HOH . M 7 HOH A 130 630 19 HOH HOH . M 7 HOH A 131 631 29 HOH HOH . M 7 HOH A 132 632 100 HOH HOH . M 7 HOH A 133 633 196 HOH HOH . M 7 HOH A 134 634 34 HOH HOH . M 7 HOH A 135 635 271 HOH HOH . M 7 HOH A 136 636 211 HOH HOH . M 7 HOH A 137 637 92 HOH HOH . M 7 HOH A 138 638 64 HOH HOH . M 7 HOH A 139 639 71 HOH HOH . M 7 HOH A 140 640 25 HOH HOH . M 7 HOH A 141 641 24 HOH HOH . M 7 HOH A 142 642 153 HOH HOH . M 7 HOH A 143 643 140 HOH HOH . M 7 HOH A 144 644 102 HOH HOH . M 7 HOH A 145 645 6 HOH HOH . M 7 HOH A 146 646 214 HOH HOH . M 7 HOH A 147 647 234 HOH HOH . M 7 HOH A 148 648 157 HOH HOH . M 7 HOH A 149 649 93 HOH HOH . M 7 HOH A 150 650 98 HOH HOH . M 7 HOH A 151 651 207 HOH HOH . M 7 HOH A 152 652 7 HOH HOH . M 7 HOH A 153 653 255 HOH HOH . M 7 HOH A 154 654 40 HOH HOH . M 7 HOH A 155 655 169 HOH HOH . M 7 HOH A 156 656 119 HOH HOH . M 7 HOH A 157 657 63 HOH HOH . M 7 HOH A 158 658 231 HOH HOH . M 7 HOH A 159 659 165 HOH HOH . M 7 HOH A 160 660 294 HOH HOH . M 7 HOH A 161 661 141 HOH HOH . M 7 HOH A 162 662 277 HOH HOH . M 7 HOH A 163 663 99 HOH HOH . M 7 HOH A 164 664 142 HOH HOH . M 7 HOH A 165 665 5 HOH HOH . M 7 HOH A 166 666 110 HOH HOH . M 7 HOH A 167 667 232 HOH HOH . M 7 HOH A 168 668 88 HOH HOH . M 7 HOH A 169 669 38 HOH HOH . M 7 HOH A 170 670 108 HOH HOH . M 7 HOH A 171 671 36 HOH HOH . M 7 HOH A 172 672 104 HOH HOH . M 7 HOH A 173 673 210 HOH HOH . M 7 HOH A 174 674 152 HOH HOH . M 7 HOH A 175 675 135 HOH HOH . M 7 HOH A 176 676 127 HOH HOH . M 7 HOH A 177 677 16 HOH HOH . M 7 HOH A 178 678 184 HOH HOH . M 7 HOH A 179 679 11 HOH HOH . M 7 HOH A 180 680 54 HOH HOH . M 7 HOH A 181 681 222 HOH HOH . M 7 HOH A 182 682 228 HOH HOH . M 7 HOH A 183 683 204 HOH HOH . M 7 HOH A 184 684 49 HOH HOH . M 7 HOH A 185 685 129 HOH HOH . M 7 HOH A 186 686 56 HOH HOH . M 7 HOH A 187 687 230 HOH HOH . M 7 HOH A 188 688 28 HOH HOH . M 7 HOH A 189 689 17 HOH HOH . M 7 HOH A 190 690 101 HOH HOH . M 7 HOH A 191 691 145 HOH HOH . M 7 HOH A 192 692 158 HOH HOH . M 7 HOH A 193 693 242 HOH HOH . M 7 HOH A 194 694 279 HOH HOH . M 7 HOH A 195 695 30 HOH HOH . M 7 HOH A 196 696 116 HOH HOH . M 7 HOH A 197 697 267 HOH HOH . M 7 HOH A 198 698 113 HOH HOH . M 7 HOH A 199 699 208 HOH HOH . M 7 HOH A 200 700 94 HOH HOH . M 7 HOH A 201 701 148 HOH HOH . M 7 HOH A 202 702 114 HOH HOH . M 7 HOH A 203 703 14 HOH HOH . M 7 HOH A 204 704 167 HOH HOH . M 7 HOH A 205 705 198 HOH HOH . M 7 HOH A 206 706 46 HOH HOH . M 7 HOH A 207 707 33 HOH HOH . M 7 HOH A 208 708 266 HOH HOH . M 7 HOH A 209 709 80 HOH HOH . M 7 HOH A 210 710 136 HOH HOH . M 7 HOH A 211 711 103 HOH HOH . M 7 HOH A 212 712 61 HOH HOH . M 7 HOH A 213 713 112 HOH HOH . M 7 HOH A 214 714 250 HOH HOH . M 7 HOH A 215 715 125 HOH HOH . M 7 HOH A 216 716 195 HOH HOH . M 7 HOH A 217 717 89 HOH HOH . M 7 HOH A 218 718 150 HOH HOH . M 7 HOH A 219 719 225 HOH HOH . M 7 HOH A 220 720 122 HOH HOH . M 7 HOH A 221 721 226 HOH HOH . M 7 HOH A 222 722 224 HOH HOH . M 7 HOH A 223 723 179 HOH HOH . M 7 HOH A 224 724 238 HOH HOH . M 7 HOH A 225 725 219 HOH HOH . M 7 HOH A 226 726 164 HOH HOH . M 7 HOH A 227 727 185 HOH HOH . M 7 HOH A 228 728 21 HOH HOH . M 7 HOH A 229 729 293 HOH HOH . M 7 HOH A 230 730 245 HOH HOH . M 7 HOH A 231 731 160 HOH HOH . M 7 HOH A 232 732 227 HOH HOH . M 7 HOH A 233 733 178 HOH HOH . M 7 HOH A 234 734 246 HOH HOH . M 7 HOH A 235 735 240 HOH HOH . M 7 HOH A 236 736 187 HOH HOH . M 7 HOH A 237 737 20 HOH HOH . M 7 HOH A 238 738 155 HOH HOH . M 7 HOH A 239 739 68 HOH HOH . M 7 HOH A 240 740 193 HOH HOH . M 7 HOH A 241 741 282 HOH HOH . M 7 HOH A 242 742 87 HOH HOH . M 7 HOH A 243 743 286 HOH HOH . M 7 HOH A 244 744 186 HOH HOH . M 7 HOH A 245 745 272 HOH HOH . M 7 HOH A 246 746 259 HOH HOH . M 7 HOH A 247 747 66 HOH HOH . M 7 HOH A 248 748 269 HOH HOH . M 7 HOH A 249 749 265 HOH HOH . M 7 HOH A 250 750 189 HOH HOH . M 7 HOH A 251 751 132 HOH HOH . M 7 HOH A 252 752 163 HOH HOH . M 7 HOH A 253 753 90 HOH HOH . M 7 HOH A 254 754 161 HOH HOH . M 7 HOH A 255 755 262 HOH HOH . M 7 HOH A 256 756 263 HOH HOH . M 7 HOH A 257 757 192 HOH HOH . M 7 HOH A 258 758 194 HOH HOH . M 7 HOH A 259 759 190 HOH HOH . M 7 HOH A 260 760 239 HOH HOH . M 7 HOH A 261 761 188 HOH HOH . M 7 HOH A 262 762 79 HOH HOH . M 7 HOH A 263 763 285 HOH HOH . M 7 HOH A 264 764 166 HOH HOH . M 7 HOH A 265 765 162 HOH HOH . M 7 HOH A 266 766 203 HOH HOH . M 7 HOH A 267 767 260 HOH HOH . M 7 HOH A 268 768 139 HOH HOH . M 7 HOH A 269 769 75 HOH HOH . M 7 HOH A 270 770 84 HOH HOH . M 7 HOH A 271 771 261 HOH HOH . M 7 HOH A 272 772 177 HOH HOH . M 7 HOH A 273 773 143 HOH HOH . M 7 HOH A 274 774 170 HOH HOH . M 7 HOH A 275 775 247 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . L 6 24.172 108.932 14.15 1 34.29 ? C1 EDO 411 A 1 HETATM 2 O O1 EDO . . . L 6 24.229 109.979 15.131 1 32.43 ? O1 EDO 411 A 1 HETATM 3 C C2 EDO . . . L 6 25.508 108.894 13.424 1 31.03 ? C2 EDO 411 A 1 HETATM 4 O O2 EDO . . . L 6 26.497 108.836 14.451 1 37.98 ? O2 EDO 411 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #