data_6SP2 # _model_server_result.job_id XYpK78drvIGm0XHrODsiFQ _model_server_result.datetime_utc '2025-03-04 13:14:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sp2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":1003}' # _entry.id 6SP2 # _exptl.entry_id 6SP2 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 1005.188 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Lauryl Maltose Neopentyl Glycol' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SP2 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SP2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 J N N ? 2 L N N ? 2 M N N ? 2 P N N ? 2 Q N N ? 2 T N N ? 2 U N N ? 2 X N N ? 2 Y N N ? 2 BA N N ? 2 CA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 71 A CYS 71 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 238 A CYS 238 1_555 A SG CYS 299 A CYS 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 71 B CYS 71 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf4 B SG CYS 238 B CYS 238 1_555 B SG CYS 299 B CYS 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 C SG CYS 71 C CYS 71 1_555 C SG CYS 95 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf6 C SG CYS 238 C CYS 238 1_555 C SG CYS 299 C CYS 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 D SG CYS 71 D CYS 71 1_555 D SG CYS 95 D CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf8 D SG CYS 238 D CYS 238 1_555 D SG CYS 299 D CYS 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf9 E SG CYS 71 E CYS 71 1_555 E SG CYS 95 E CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf10 E SG CYS 238 E CYS 238 1_555 E SG CYS 299 E CYS 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf11 F SG CYS 71 F CYS 71 1_555 F SG CYS 95 F CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf12 F SG CYS 238 F CYS 238 1_555 F SG CYS 299 F CYS 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C47 H88 O22' _chem_comp.formula_weight 1005.188 _chem_comp.id LMN _chem_comp.mon_nstd_flag . _chem_comp.name 'Lauryl Maltose Neopentyl Glycol' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2,2-didecylpropane-1,3-bis-b-D-maltopyranoside # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O5 C1 LMN sing 447 n n C2 C1 LMN sing 448 n n C1 O1 LMN sing 449 n n C1 H1 LMN sing 450 n n CBS O1 LMN sing 451 n n H2 C2 LMN sing 452 n n C2 C3 LMN sing 453 n n C2 O2 LMN sing 454 n n HO2 O2 LMN sing 455 n n O3 C3 LMN sing 456 n n C4 C3 LMN sing 457 n n C3 H3 LMN sing 458 n n HO3 O3 LMN sing 459 n n C5 C4 LMN sing 460 n n H4 C4 LMN sing 461 n n C4 O4 LMN sing 462 n n O4 CCR LMN sing 463 n n C6 C5 LMN sing 464 n n C5 H5 LMN sing 465 n n C5 O5 LMN sing 466 n n O6 C6 LMN sing 467 n n H6A C6 LMN sing 468 n n H6 C6 LMN sing 469 n n HO6 O6 LMN sing 470 n n HAAB CAA LMN sing 471 n n CAW CAA LMN sing 472 n n CAA HAA LMN sing 473 n n CAA HAAA LMN sing 474 n n HABB CAB LMN sing 475 n n CAB HABA LMN sing 476 n n CAB CAX LMN sing 477 n n CAB HAB LMN sing 478 n n CBM OAI LMN sing 479 n n HOAI OAI LMN sing 480 n n HOAJ OAJ LMN sing 481 n n CBN OAJ LMN sing 482 n n HOAL OAL LMN sing 483 n n OAL CBP LMN sing 484 n n CCH OAN LMN sing 485 n n OAN HOAN LMN sing 486 n n CCL OAP LMN sing 487 n n HOAP OAP LMN sing 488 n n CCN OAQ LMN sing 489 n n OAQ HOAQ LMN sing 490 n n CCO OAR LMN sing 491 n n HOAR OAR LMN sing 492 n n HOAS OAS LMN sing 493 n n CCT OAS LMN sing 494 n n HOAT OAT LMN sing 495 n n OAT CCU LMN sing 496 n n HOAU OAU LMN sing 497 n n OAU CCV LMN sing 498 n n CCW OAV LMN sing 499 n n OAV HOAV LMN sing 500 n n CAY CAW LMN sing 501 n n CAW HAW LMN sing 502 n n CAW HAWA LMN sing 503 n n CAZ CAX LMN sing 504 n n HAXA CAX LMN sing 505 n n CAX HAX LMN sing 506 n n HAYA CAY LMN sing 507 n n CBA CAY LMN sing 508 n n CAY HAY LMN sing 509 n n HAZA CAZ LMN sing 510 n n CAZ CBB LMN sing 511 n n CAZ HAZ LMN sing 512 n n HBA CBA LMN sing 513 n n HBAA CBA LMN sing 514 n n CBA CBC LMN sing 515 n n CBD CBB LMN sing 516 n n CBB HBB LMN sing 517 n n CBB HBBA LMN sing 518 n n CBE CBC LMN sing 519 n n CBC HBCA LMN sing 520 n n CBC HBC LMN sing 521 n n HBD CBD LMN sing 522 n n CBF CBD LMN sing 523 n n CBD HBDA LMN sing 524 n n HBE CBE LMN sing 525 n n CBE HBEA LMN sing 526 n n CBE CBG LMN sing 527 n n HBFA CBF LMN sing 528 n n CBH CBF LMN sing 529 n n CBF HBF LMN sing 530 n n CBI CBG LMN sing 531 n n HBGA CBG LMN sing 532 n n CBG HBG LMN sing 533 n n HBHA CBH LMN sing 534 n n HBH CBH LMN sing 535 n n CBH CBJ LMN sing 536 n n CBK CBI LMN sing 537 n n HBI CBI LMN sing 538 n n CBI HBIA LMN sing 539 n n CBL CBJ LMN sing 540 n n CBJ HBJ LMN sing 541 n n CBJ HBJA LMN sing 542 n n HBKA CBK LMN sing 543 n n CBQ CBK LMN sing 544 n n CBK HBK LMN sing 545 n n HBL CBL LMN sing 546 n n HBLA CBL LMN sing 547 n n CBL CBR LMN sing 548 n n CCC CBM LMN sing 549 n n HBM CBM LMN sing 550 n n CBM HBMA LMN sing 551 n n HBNA CBN LMN sing 552 n n CCD CBN LMN sing 553 n n CBN HBN LMN sing 554 n n CCF CBP LMN sing 555 n n CBP HBPA LMN sing 556 n n CBP HBP LMN sing 557 n n CCM CBQ LMN sing 558 n n HBQ CBQ LMN sing 559 n n CBQ HBQA LMN sing 560 n n HBRA CBR LMN sing 561 n n CBR HBR LMN sing 562 n n CBR CCM LMN sing 563 n n HBS CBS LMN sing 564 n n HBSA CBS LMN sing 565 n n CBS CCM LMN sing 566 n n OBV CBT LMN sing 567 n n CCM CBT LMN sing 568 n n CBT HBT LMN sing 569 n n CBT HBTA LMN sing 570 n n CCJ OBV LMN sing 571 n n CCJ OBX LMN sing 572 n n CCF OBX LMN sing 573 n n CCR OBY LMN sing 574 n n OBY CCC LMN sing 575 n n CCS OBZ LMN sing 576 n n OBZ CCD LMN sing 577 n n CCS OCB LMN sing 578 n n OCB CCQ LMN sing 579 n n HCC CCC LMN sing 580 n n CCC CCN LMN sing 581 n n CCO CCD LMN sing 582 n n CCD HCD LMN sing 583 n n HCF CCF LMN sing 584 n n CCF CCQ LMN sing 585 n n HCH CCH LMN sing 586 n n CCH CCL LMN sing 587 n n CCH CCQ LMN sing 588 n n HCJ CCJ LMN sing 589 n n CCJ CCL LMN sing 590 n n CCL HCL LMN sing 591 n n CCT CCN LMN sing 592 n n CCN HCN LMN sing 593 n n CCU CCO LMN sing 594 n n CCO HCO LMN sing 595 n n CCQ HCQ LMN sing 596 n n CCV CCR LMN sing 597 n n CCR HCR LMN sing 598 n n HCS CCS LMN sing 599 n n CCW CCS LMN sing 600 n n CCV CCT LMN sing 601 n n CCT HCT LMN sing 602 n n CCU CCW LMN sing 603 n n CCU HCU LMN sing 604 n n CCV HCV LMN sing 605 n n CCW HCW LMN sing 606 n n # _atom_sites.entry_id 6SP2 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 LMN A 1 601 1003 LMN LMN . H 3 P5S A 1 602 1004 P5S P5S . I 4 CDL A 1 603 1001 CDL CDL . J 2 LMN A 1 604 1002 LMN LMN . K 4 CDL B 1 1001 1001 CDL CDL . L 2 LMN B 1 1002 1002 LMN LMN . M 2 LMN B 1 1003 1003 LMN LMN . N 3 P5S B 1 1004 1004 P5S P5S . O 4 CDL C 1 1001 1001 CDL CDL . P 2 LMN C 1 1002 1002 LMN LMN . Q 2 LMN C 1 1003 1003 LMN LMN . R 3 P5S C 1 1004 1004 P5S P5S . S 4 CDL D 1 1001 1001 CDL CDL . T 2 LMN D 1 1002 1002 LMN LMN . U 2 LMN D 1 1003 1003 LMN LMN . V 3 P5S D 1 1004 1004 P5S P5S . W 4 CDL E 1 1001 1001 CDL CDL . X 2 LMN E 1 1002 1002 LMN LMN . Y 2 LMN E 1 1003 1003 LMN LMN . Z 3 P5S E 1 1004 1004 P5S P5S . AA 4 CDL F 1 1001 1001 CDL CDL . BA 2 LMN F 1 1002 1002 LMN LMN . CA 2 LMN F 1 1003 1003 LMN LMN . DA 3 P5S F 1 1004 1004 P5S P5S . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 LMN . . . Q 2 192.086 184.072 197.08 1 173.4 ? O1 LMN 1003 C 1 HETATM 2 C CAA LMN . . . Q 2 188.5 180.74 187.477 1 173.4 ? CAA LMN 1003 C 1 HETATM 3 C CAB LMN . . . Q 2 194.845 179.238 186.157 1 173.4 ? CAB LMN 1003 C 1 HETATM 4 O OAJ LMN . . . Q 2 196.632 182.956 208.319 1 173.4 ? OAJ LMN 1003 C 1 HETATM 5 O OAL LMN . . . Q 2 192.338 186.796 200.483 1 173.4 ? OAL LMN 1003 C 1 HETATM 6 O OAN LMN . . . Q 2 193.148 181.464 203.438 1 173.4 ? OAN LMN 1003 C 1 HETATM 7 O OAP LMN . . . Q 2 192.001 181.408 200.898 1 173.4 ? OAP LMN 1003 C 1 HETATM 8 O OAR LMN . . . Q 2 197.621 184.63 206.566 1 173.4 ? OAR LMN 1003 C 1 HETATM 9 O OAT LMN . . . Q 2 197.036 185.949 203.922 1 173.4 ? OAT LMN 1003 C 1 HETATM 10 O OAV LMN . . . Q 2 193.875 186.499 205.376 1 173.4 ? OAV LMN 1003 C 1 HETATM 11 C CAW LMN . . . Q 2 188.758 180.739 188.966 1 173.4 ? CAW LMN 1003 C 1 HETATM 12 C CAX LMN . . . Q 2 194.295 178.7 187.457 1 173.4 ? CAX LMN 1003 C 1 HETATM 13 C CAY LMN . . . Q 2 189.413 179.462 189.463 1 173.4 ? CAY LMN 1003 C 1 HETATM 14 C CAZ LMN . . . Q 2 195.027 179.227 188.676 1 173.4 ? CAZ LMN 1003 C 1 HETATM 15 C CBA LMN . . . Q 2 189.65 179.447 190.965 1 173.4 ? CBA LMN 1003 C 1 HETATM 16 C CBB LMN . . . Q 2 194.497 178.694 189.998 1 173.4 ? CBB LMN 1003 C 1 HETATM 17 C CBC LMN . . . Q 2 190.363 178.209 191.488 1 173.4 ? CBC LMN 1003 C 1 HETATM 18 C CBD LMN . . . Q 2 195.278 179.156 191.222 1 173.4 ? CBD LMN 1003 C 1 HETATM 19 C CBE LMN . . . Q 2 190.744 178.328 192.952 1 173.4 ? CBE LMN 1003 C 1 HETATM 20 C CBF LMN . . . Q 2 195.43 180.666 191.333 1 173.4 ? CBF LMN 1003 C 1 HETATM 21 C CBG LMN . . . Q 2 191.494 179.611 193.24 1 173.4 ? CBG LMN 1003 C 1 HETATM 22 C CBH LMN . . . Q 2 195.219 181.203 192.74 1 173.4 ? CBH LMN 1003 C 1 HETATM 23 C CBI LMN . . . Q 2 191.799 179.871 194.7 1 173.4 ? CBI LMN 1003 C 1 HETATM 24 C CBJ LMN . . . Q 2 195.599 182.665 192.917 1 173.4 ? CBJ LMN 1003 C 1 HETATM 25 C CBK LMN . . . Q 2 192.385 181.252 194.909 1 173.4 ? CBK LMN 1003 C 1 HETATM 26 C CBL LMN . . . Q 2 194.946 183.334 194.119 1 173.4 ? CBL LMN 1003 C 1 HETATM 27 C CBN LMN . . . Q 2 195.589 182.74 207.376 1 173.4 ? CBN LMN 1003 C 1 HETATM 28 C CBP LMN . . . Q 2 192.032 185.902 201.545 1 173.4 ? CBP LMN 1003 C 1 HETATM 29 C CBQ LMN . . . Q 2 192.949 181.499 196.302 1 173.4 ? CBQ LMN 1003 C 1 HETATM 30 C CBR LMN . . . Q 2 195.091 182.546 195.419 1 173.4 ? CBR LMN 1003 C 1 HETATM 31 C CBS LMN . . . Q 2 193.196 183.991 196.197 1 173.4 ? CBS LMN 1003 C 1 HETATM 32 C CBT LMN . . . Q 2 194.501 182.678 197.847 1 173.4 ? CBT LMN 1003 C 1 HETATM 33 O OBV LMN . . . Q 2 193.457 182.424 198.774 1 173.4 ? OBV LMN 1003 C 1 HETATM 34 O OBX LMN . . . Q 2 192.762 184.067 200.246 1 173.4 ? OBX LMN 1003 C 1 HETATM 35 O OBZ LMN . . . Q 2 194.17 183.69 205.735 1 173.4 ? OBZ LMN 1003 C 1 HETATM 36 O OCB LMN . . . Q 2 192.894 184.307 203.915 1 173.4 ? OCB LMN 1003 C 1 HETATM 37 C CCD LMN . . . Q 2 195.304 183.987 206.571 1 173.4 ? CCD LMN 1003 C 1 HETATM 38 C CCF LMN . . . Q 2 192.942 184.697 201.524 1 173.4 ? CCF LMN 1003 C 1 HETATM 39 C CCH LMN . . . Q 2 193.506 182.445 202.474 1 173.4 ? CCH LMN 1003 C 1 HETATM 40 C CCJ LMN . . . Q 2 193.627 182.966 200.047 1 173.4 ? CCJ LMN 1003 C 1 HETATM 41 C CCL LMN . . . Q 2 193.332 181.88 201.071 1 173.4 ? CCL LMN 1003 C 1 HETATM 42 C CCM LMN . . . Q 2 193.934 182.675 196.431 1 173.4 ? CCM LMN 1003 C 1 HETATM 43 C CCO LMN . . . Q 2 196.489 184.441 205.725 1 173.4 ? CCO LMN 1003 C 1 HETATM 44 C CCQ LMN . . . Q 2 192.653 183.695 202.635 1 173.4 ? CCQ LMN 1003 C 1 HETATM 45 C CCS LMN . . . Q 2 194.198 184.286 204.446 1 173.4 ? CCS LMN 1003 C 1 HETATM 46 C CCU LMN . . . Q 2 196.148 185.743 205.014 1 173.4 ? CCU LMN 1003 C 1 HETATM 47 C CCW LMN . . . Q 2 194.706 185.722 204.521 1 173.4 ? CCW LMN 1003 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 47 #