data_6SPV # _model_server_result.job_id JL_o8vsMUNhj-kw5Ir0Ndw _model_server_result.datetime_utc '2024-11-22 23:25:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6spv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6SPV # _exptl.entry_id 6SPV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SPV _cell.length_a 50.38 _cell.length_b 50.38 _cell.length_c 178.27 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SPV _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 116 n n N1 HN11 GSH sing 117 n n N1 HN12 GSH sing 118 n n CA1 C1 GSH sing 119 n n CA1 CB1 GSH sing 120 n n CA1 HA1 GSH sing 121 n n C1 O11 GSH doub 122 n n C1 O12 GSH sing 123 n n O12 H12 GSH sing 124 n n CB1 CG1 GSH sing 125 n n CB1 HB12 GSH sing 126 n n CB1 HB13 GSH sing 127 n n CG1 CD1 GSH sing 128 n n CG1 HG12 GSH sing 129 n n CG1 HG13 GSH sing 130 n n CD1 OE1 GSH doub 131 n n CD1 N2 GSH sing 132 n n N2 CA2 GSH sing 133 n n N2 HN2 GSH sing 134 n n CA2 C2 GSH sing 135 n n CA2 CB2 GSH sing 136 n n CA2 HA2 GSH sing 137 n n C2 O2 GSH doub 138 n n C2 N3 GSH sing 139 n n CB2 SG2 GSH sing 140 n n CB2 HB22 GSH sing 141 n n CB2 HB23 GSH sing 142 n n SG2 HSG GSH sing 143 n n N3 CA3 GSH sing 144 n n N3 HN3 GSH sing 145 n n CA3 C3 GSH sing 146 n n CA3 HA31 GSH sing 147 n n CA3 HA32 GSH sing 148 n n C3 O31 GSH doub 149 n n C3 O32 GSH sing 150 n n O32 H32 GSH sing 151 n n # _atom_sites.entry_id 6SPV _atom_sites.fract_transf_matrix[1][1] 0.019849 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019849 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005609 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GSH A 1 301 28 GSH GSH . C 3 HOH A 1 401 10 HOH HOH . C 3 HOH A 2 402 3 HOH HOH . C 3 HOH A 3 403 32 HOH HOH . C 3 HOH A 4 404 26 HOH HOH . C 3 HOH A 5 405 9 HOH HOH . C 3 HOH A 6 406 33 HOH HOH . C 3 HOH A 7 407 13 HOH HOH . C 3 HOH A 8 408 40 HOH HOH . C 3 HOH A 9 409 16 HOH HOH . C 3 HOH A 10 410 18 HOH HOH . C 3 HOH A 11 411 14 HOH HOH . C 3 HOH A 12 412 17 HOH HOH . C 3 HOH A 13 413 31 HOH HOH . C 3 HOH A 14 414 11 HOH HOH . C 3 HOH A 15 415 4 HOH HOH . C 3 HOH A 16 416 37 HOH HOH . C 3 HOH A 17 417 21 HOH HOH . C 3 HOH A 18 418 39 HOH HOH . C 3 HOH A 19 419 20 HOH HOH . C 3 HOH A 20 420 7 HOH HOH . C 3 HOH A 21 421 38 HOH HOH . C 3 HOH A 22 422 15 HOH HOH . C 3 HOH A 23 423 2 HOH HOH . C 3 HOH A 24 424 19 HOH HOH . C 3 HOH A 25 425 34 HOH HOH . C 3 HOH A 26 426 29 HOH HOH . C 3 HOH A 27 427 12 HOH HOH . C 3 HOH A 28 428 30 HOH HOH . C 3 HOH A 29 429 6 HOH HOH . C 3 HOH A 30 430 35 HOH HOH . C 3 HOH A 31 431 5 HOH HOH . C 3 HOH A 32 432 36 HOH HOH . C 3 HOH A 33 433 25 HOH HOH . C 3 HOH A 34 434 8 HOH HOH . C 3 HOH A 35 435 23 HOH HOH . C 3 HOH A 36 436 24 HOH HOH . C 3 HOH A 37 437 28 HOH HOH . C 3 HOH A 38 438 22 HOH HOH . C 3 HOH A 39 439 27 HOH HOH . C 3 HOH A 40 440 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . B 2 32.882 30.264 -2.665 1 95.71 ? N1 GSH 301 A 1 HETATM 2 C CA1 GSH . . . B 2 32.271 30.664 -3.927 1 92.87 ? CA1 GSH 301 A 1 HETATM 3 C C1 GSH . . . B 2 32.6 32.105 -4.245 1 95.32 ? C1 GSH 301 A 1 HETATM 4 O O11 GSH . . . B 2 31.822 32.783 -4.955 1 95.99 ? O11 GSH 301 A 1 HETATM 5 O O12 GSH . . . B 2 33.664 32.587 -3.794 1 98.16 ? O12 GSH 301 A 1 HETATM 6 C CB1 GSH . . . B 2 30.762 30.385 -3.9 1 88.35 ? CB1 GSH 301 A 1 HETATM 7 C CG1 GSH . . . B 2 29.985 31.109 -2.803 1 84.7 ? CG1 GSH 301 A 1 HETATM 8 C CD1 GSH . . . B 2 28.716 31.663 -3.408 1 86.63 ? CD1 GSH 301 A 1 HETATM 9 O OE1 GSH . . . B 2 27.739 30.943 -3.545 1 86.07 ? OE1 GSH 301 A 1 HETATM 10 N N2 GSH . . . B 2 28.77 32.943 -3.786 1 87.82 ? N2 GSH 301 A 1 HETATM 11 C CA2 GSH . . . B 2 27.637 33.827 -4.02 1 84.29 ? CA2 GSH 301 A 1 HETATM 12 C C2 GSH . . . B 2 26.956 33.558 -5.334 1 84.92 ? C2 GSH 301 A 1 HETATM 13 O O2 GSH . . . B 2 26.945 34.388 -6.229 1 77.27 ? O2 GSH 301 A 1 HETATM 14 C CB2 GSH . . . B 2 28.097 35.283 -3.973 1 87.88 ? CB2 GSH 301 A 1 HETATM 15 S SG2 GSH . . . B 2 29.661 35.548 -3.092 1 97.62 ? SG2 GSH 301 A 1 HETATM 16 N N3 GSH . . . B 2 26.375 32.369 -5.454 1 91.28 ? N3 GSH 301 A 1 HETATM 17 C CA3 GSH . . . B 2 25.396 32.085 -6.485 1 95.16 ? CA3 GSH 301 A 1 HETATM 18 C C3 GSH . . . B 2 26.053 31.597 -7.75 1 98.67 ? C3 GSH 301 A 1 HETATM 19 O O31 GSH . . . B 2 26.297 32.434 -8.646 1 97.36 ? O31 GSH 301 A 1 HETATM 20 O O32 GSH . . . B 2 26.327 30.379 -7.849 1 102.77 ? O32 GSH 301 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #