data_6SPZ # _model_server_result.job_id WFxzYOD7FDjf08PbpPxeRg _model_server_result.datetime_utc '2025-02-05 04:48:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6spz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 6SPZ # _exptl.entry_id 6SPZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SPZ _cell.length_a 50.5 _cell.length_b 50.5 _cell.length_c 176.37 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SPZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 116 n n N1 HN11 GSH sing 117 n n N1 HN12 GSH sing 118 n n CA1 C1 GSH sing 119 n n CA1 CB1 GSH sing 120 n n CA1 HA1 GSH sing 121 n n C1 O11 GSH doub 122 n n C1 O12 GSH sing 123 n n O12 H12 GSH sing 124 n n CB1 CG1 GSH sing 125 n n CB1 HB12 GSH sing 126 n n CB1 HB13 GSH sing 127 n n CG1 CD1 GSH sing 128 n n CG1 HG12 GSH sing 129 n n CG1 HG13 GSH sing 130 n n CD1 OE1 GSH doub 131 n n CD1 N2 GSH sing 132 n n N2 CA2 GSH sing 133 n n N2 HN2 GSH sing 134 n n CA2 C2 GSH sing 135 n n CA2 CB2 GSH sing 136 n n CA2 HA2 GSH sing 137 n n C2 O2 GSH doub 138 n n C2 N3 GSH sing 139 n n CB2 SG2 GSH sing 140 n n CB2 HB22 GSH sing 141 n n CB2 HB23 GSH sing 142 n n SG2 HSG GSH sing 143 n n N3 CA3 GSH sing 144 n n N3 HN3 GSH sing 145 n n CA3 C3 GSH sing 146 n n CA3 HA31 GSH sing 147 n n CA3 HA32 GSH sing 148 n n C3 O31 GSH doub 149 n n C3 O32 GSH sing 150 n n O32 H32 GSH sing 151 n n # _atom_sites.entry_id 6SPZ _atom_sites.fract_transf_matrix[1][1] 0.019802 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019802 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 GSH A 1 301 28 GSH GSH . E 4 HOH A 1 401 30 HOH HOH . E 4 HOH A 2 402 13 HOH HOH . E 4 HOH A 3 403 18 HOH HOH . E 4 HOH A 4 404 10 HOH HOH . E 4 HOH A 5 405 42 HOH HOH . E 4 HOH A 6 406 22 HOH HOH . E 4 HOH A 7 407 55 HOH HOH . E 4 HOH A 8 408 33 HOH HOH . E 4 HOH A 9 409 21 HOH HOH . E 4 HOH A 10 410 24 HOH HOH . E 4 HOH A 11 411 34 HOH HOH . E 4 HOH A 12 412 56 HOH HOH . E 4 HOH A 13 413 11 HOH HOH . E 4 HOH A 14 414 8 HOH HOH . E 4 HOH A 15 415 1 HOH HOH . E 4 HOH A 16 416 54 HOH HOH . E 4 HOH A 17 417 3 HOH HOH . E 4 HOH A 18 418 5 HOH HOH . E 4 HOH A 19 419 51 HOH HOH . E 4 HOH A 20 420 53 HOH HOH . E 4 HOH A 21 421 43 HOH HOH . E 4 HOH A 22 422 28 HOH HOH . E 4 HOH A 23 423 41 HOH HOH . E 4 HOH A 24 424 14 HOH HOH . E 4 HOH A 25 425 47 HOH HOH . E 4 HOH A 26 426 20 HOH HOH . E 4 HOH A 27 427 16 HOH HOH . E 4 HOH A 28 428 26 HOH HOH . E 4 HOH A 29 429 4 HOH HOH . E 4 HOH A 30 430 2 HOH HOH . E 4 HOH A 31 431 12 HOH HOH . E 4 HOH A 32 432 23 HOH HOH . E 4 HOH A 33 433 40 HOH HOH . E 4 HOH A 34 434 46 HOH HOH . E 4 HOH A 35 435 27 HOH HOH . E 4 HOH A 36 436 37 HOH HOH . E 4 HOH A 37 437 25 HOH HOH . E 4 HOH A 38 438 32 HOH HOH . E 4 HOH A 39 439 35 HOH HOH . E 4 HOH A 40 440 36 HOH HOH . E 4 HOH A 41 441 45 HOH HOH . E 4 HOH A 42 442 17 HOH HOH . E 4 HOH A 43 443 19 HOH HOH . E 4 HOH A 44 444 6 HOH HOH . E 4 HOH A 45 445 44 HOH HOH . E 4 HOH A 46 446 7 HOH HOH . E 4 HOH A 47 447 15 HOH HOH . E 4 HOH A 48 448 38 HOH HOH . E 4 HOH A 49 449 50 HOH HOH . E 4 HOH A 50 450 9 HOH HOH . E 4 HOH A 51 451 49 HOH HOH . E 4 HOH A 52 452 52 HOH HOH . E 4 HOH A 53 453 29 HOH HOH . E 4 HOH A 54 454 48 HOH HOH . E 4 HOH A 55 455 39 HOH HOH . E 4 HOH A 56 456 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . D 3 32.61 29.777 -2.491 1 93.22 ? N1 GSH 301 A 1 HETATM 2 C CA1 GSH . . . D 3 32.294 30.294 -3.815 1 91.14 ? CA1 GSH 301 A 1 HETATM 3 C C1 GSH . . . D 3 32.975 31.624 -4.042 1 94.86 ? C1 GSH 301 A 1 HETATM 4 O O11 GSH . . . D 3 32.371 32.538 -4.649 1 100.13 ? O11 GSH 301 A 1 HETATM 5 O O12 GSH . . . D 3 34.146 31.773 -3.623 1 95.51 ? O12 GSH 301 A 1 HETATM 6 C CB1 GSH . . . D 3 30.777 30.373 -4.009 1 82.98 ? CB1 GSH 301 A 1 HETATM 7 C CG1 GSH . . . D 3 30.02 31.097 -2.899 1 76.17 ? CG1 GSH 301 A 1 HETATM 8 C CD1 GSH . . . D 3 28.682 31.579 -3.428 1 76.6 ? CD1 GSH 301 A 1 HETATM 9 O OE1 GSH . . . D 3 28.042 30.899 -4.213 1 76.33 ? OE1 GSH 301 A 1 HETATM 10 N N2 GSH . . . D 3 28.229 32.751 -2.978 1 74.6 ? N2 GSH 301 A 1 HETATM 11 C CA2 GSH . . . D 3 28.387 34.055 -3.622 1 75.56 ? CA2 GSH 301 A 1 HETATM 12 C C2 GSH . . . D 3 27.761 34.179 -4.988 1 73.45 ? C2 GSH 301 A 1 HETATM 13 O O2 GSH . . . D 3 28.115 35.057 -5.751 1 74.56 ? O2 GSH 301 A 1 HETATM 14 C CB2 GSH . . . D 3 29.857 34.482 -3.677 1 81.35 ? CB2 GSH 301 A 1 HETATM 15 S SG2 GSH . . . D 3 30.412 35.38 -2.203 1 92.64 ? SG2 GSH 301 A 1 HETATM 16 N N3 GSH . . . D 3 26.811 33.326 -5.333 1 75.18 ? N3 GSH 301 A 1 HETATM 17 C CA3 GSH . . . D 3 26.151 33.453 -6.615 1 72.57 ? CA3 GSH 301 A 1 HETATM 18 C C3 GSH . . . D 3 26.245 32.177 -7.404 1 74.76 ? C3 GSH 301 A 1 HETATM 19 O O31 GSH . . . D 3 27.002 32.147 -8.395 1 73.54 ? O31 GSH 301 A 1 HETATM 20 O O32 GSH . . . D 3 25.557 31.201 -7.034 1 81.4 ? O32 GSH 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #