data_6SQ9 # _model_server_result.job_id ji_gDQnVmJj1Ac8c8Ur8hw _model_server_result.datetime_utc '2024-11-28 23:18:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sq9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6SQ9 # _exptl.entry_id 6SQ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6SQ9 _cell.length_a 97.403 _cell.length_b 97.403 _cell.length_c 140.689 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SQ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 48.7015 -84.353472 0 3 'crystal symmetry operation' 9_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 46.896333 4 'crystal symmetry operation' 12_545 x,x-y-1,-z+1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 48.7015 -84.353472 46.896333 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 106 n n N1 C6 EPE sing 107 n n N1 C9 EPE sing 108 n n C2 C3 EPE sing 109 n n C2 H21 EPE sing 110 n n C2 H22 EPE sing 111 n n C3 N4 EPE sing 112 n n C3 H31 EPE sing 113 n n C3 H32 EPE sing 114 n n N4 C5 EPE sing 115 n n N4 C7 EPE sing 116 n n C5 C6 EPE sing 117 n n C5 H51 EPE sing 118 n n C5 H52 EPE sing 119 n n C6 H61 EPE sing 120 n n C6 H62 EPE sing 121 n n C7 C8 EPE sing 122 n n C7 H71 EPE sing 123 n n C7 H72 EPE sing 124 n n C8 O8 EPE sing 125 n n C8 H81 EPE sing 126 n n C8 H82 EPE sing 127 n n O8 HO8 EPE sing 128 n n C9 C10 EPE sing 129 n n C9 H91 EPE sing 130 n n C9 H92 EPE sing 131 n n C10 S EPE sing 132 n n C10 H101 EPE sing 133 n n C10 H102 EPE sing 134 n n S O1S EPE doub 135 n n S O2S EPE doub 136 n n S O3S EPE sing 137 n n O3S HOS3 EPE sing 138 n n # _atom_sites.entry_id 6SQ9 _atom_sites.fract_transf_matrix[1][1] 0.010267 _atom_sites.fract_transf_matrix[1][2] 0.005927 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011855 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007108 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 301 301 NAD NAD . C 3 BZJ A 1 302 401 BZJ LIG . D 4 EPE A 1 303 501 EPE EPE . E 5 HOH A 1 401 102 HOH HOH . E 5 HOH A 2 402 69 HOH HOH . E 5 HOH A 3 403 190 HOH HOH . E 5 HOH A 4 404 166 HOH HOH . E 5 HOH A 5 405 150 HOH HOH . E 5 HOH A 6 406 81 HOH HOH . E 5 HOH A 7 407 20 HOH HOH . E 5 HOH A 8 408 105 HOH HOH . E 5 HOH A 9 409 79 HOH HOH . E 5 HOH A 10 410 196 HOH HOH . E 5 HOH A 11 411 60 HOH HOH . E 5 HOH A 12 412 120 HOH HOH . E 5 HOH A 13 413 78 HOH HOH . E 5 HOH A 14 414 153 HOH HOH . E 5 HOH A 15 415 133 HOH HOH . E 5 HOH A 16 416 68 HOH HOH . E 5 HOH A 17 417 87 HOH HOH . E 5 HOH A 18 418 106 HOH HOH . E 5 HOH A 19 419 8 HOH HOH . E 5 HOH A 20 420 189 HOH HOH . E 5 HOH A 21 421 115 HOH HOH . E 5 HOH A 22 422 116 HOH HOH . E 5 HOH A 23 423 61 HOH HOH . E 5 HOH A 24 424 118 HOH HOH . E 5 HOH A 25 425 142 HOH HOH . E 5 HOH A 26 426 181 HOH HOH . E 5 HOH A 27 427 139 HOH HOH . E 5 HOH A 28 428 107 HOH HOH . E 5 HOH A 29 429 67 HOH HOH . E 5 HOH A 30 430 52 HOH HOH . E 5 HOH A 31 431 28 HOH HOH . E 5 HOH A 32 432 22 HOH HOH . E 5 HOH A 33 433 41 HOH HOH . E 5 HOH A 34 434 70 HOH HOH . E 5 HOH A 35 435 182 HOH HOH . E 5 HOH A 36 436 10 HOH HOH . E 5 HOH A 37 437 12 HOH HOH . E 5 HOH A 38 438 72 HOH HOH . E 5 HOH A 39 439 48 HOH HOH . E 5 HOH A 40 440 126 HOH HOH . E 5 HOH A 41 441 35 HOH HOH . E 5 HOH A 42 442 83 HOH HOH . E 5 HOH A 43 443 44 HOH HOH . E 5 HOH A 44 444 147 HOH HOH . E 5 HOH A 45 445 88 HOH HOH . E 5 HOH A 46 446 16 HOH HOH . E 5 HOH A 47 447 73 HOH HOH . E 5 HOH A 48 448 198 HOH HOH . E 5 HOH A 49 449 17 HOH HOH . E 5 HOH A 50 450 114 HOH HOH . E 5 HOH A 51 451 27 HOH HOH . E 5 HOH A 52 452 187 HOH HOH . E 5 HOH A 53 453 185 HOH HOH . E 5 HOH A 54 454 201 HOH HOH . E 5 HOH A 55 455 165 HOH HOH . E 5 HOH A 56 456 9 HOH HOH . E 5 HOH A 57 457 29 HOH HOH . E 5 HOH A 58 458 1 HOH HOH . E 5 HOH A 59 459 58 HOH HOH . E 5 HOH A 60 460 5 HOH HOH . E 5 HOH A 61 461 24 HOH HOH . E 5 HOH A 62 462 141 HOH HOH . E 5 HOH A 63 463 57 HOH HOH . E 5 HOH A 64 464 121 HOH HOH . E 5 HOH A 65 465 25 HOH HOH . E 5 HOH A 66 466 112 HOH HOH . E 5 HOH A 67 467 51 HOH HOH . E 5 HOH A 68 468 39 HOH HOH . E 5 HOH A 69 469 13 HOH HOH . E 5 HOH A 70 470 34 HOH HOH . E 5 HOH A 71 471 75 HOH HOH . E 5 HOH A 72 472 30 HOH HOH . E 5 HOH A 73 473 7 HOH HOH . E 5 HOH A 74 474 64 HOH HOH . E 5 HOH A 75 475 26 HOH HOH . E 5 HOH A 76 476 19 HOH HOH . E 5 HOH A 77 477 76 HOH HOH . E 5 HOH A 78 478 54 HOH HOH . E 5 HOH A 79 479 18 HOH HOH . E 5 HOH A 80 480 31 HOH HOH . E 5 HOH A 81 481 2 HOH HOH . E 5 HOH A 82 482 91 HOH HOH . E 5 HOH A 83 483 135 HOH HOH . E 5 HOH A 84 484 15 HOH HOH . E 5 HOH A 85 485 6 HOH HOH . E 5 HOH A 86 486 127 HOH HOH . E 5 HOH A 87 487 74 HOH HOH . E 5 HOH A 88 488 168 HOH HOH . E 5 HOH A 89 489 36 HOH HOH . E 5 HOH A 90 490 56 HOH HOH . E 5 HOH A 91 491 37 HOH HOH . E 5 HOH A 92 492 145 HOH HOH . E 5 HOH A 93 493 137 HOH HOH . E 5 HOH A 94 494 93 HOH HOH . E 5 HOH A 95 495 109 HOH HOH . E 5 HOH A 96 496 125 HOH HOH . E 5 HOH A 97 497 65 HOH HOH . E 5 HOH A 98 498 103 HOH HOH . E 5 HOH A 99 499 97 HOH HOH . E 5 HOH A 100 500 3 HOH HOH . E 5 HOH A 101 501 45 HOH HOH . E 5 HOH A 102 502 151 HOH HOH . E 5 HOH A 103 503 21 HOH HOH . E 5 HOH A 104 504 92 HOH HOH . E 5 HOH A 105 505 110 HOH HOH . E 5 HOH A 106 506 82 HOH HOH . E 5 HOH A 107 507 47 HOH HOH . E 5 HOH A 108 508 128 HOH HOH . E 5 HOH A 109 509 132 HOH HOH . E 5 HOH A 110 510 100 HOH HOH . E 5 HOH A 111 511 167 HOH HOH . E 5 HOH A 112 512 50 HOH HOH . E 5 HOH A 113 513 38 HOH HOH . E 5 HOH A 114 514 4 HOH HOH . E 5 HOH A 115 515 161 HOH HOH . E 5 HOH A 116 516 43 HOH HOH . E 5 HOH A 117 517 148 HOH HOH . E 5 HOH A 118 518 62 HOH HOH . E 5 HOH A 119 519 63 HOH HOH . E 5 HOH A 120 520 154 HOH HOH . E 5 HOH A 121 521 86 HOH HOH . E 5 HOH A 122 522 170 HOH HOH . E 5 HOH A 123 523 173 HOH HOH . E 5 HOH A 124 524 46 HOH HOH . E 5 HOH A 125 525 71 HOH HOH . E 5 HOH A 126 526 14 HOH HOH . E 5 HOH A 127 527 40 HOH HOH . E 5 HOH A 128 528 11 HOH HOH . E 5 HOH A 129 529 32 HOH HOH . E 5 HOH A 130 530 89 HOH HOH . E 5 HOH A 131 531 90 HOH HOH . E 5 HOH A 132 532 84 HOH HOH . E 5 HOH A 133 533 111 HOH HOH . E 5 HOH A 134 534 55 HOH HOH . E 5 HOH A 135 535 98 HOH HOH . E 5 HOH A 136 536 95 HOH HOH . E 5 HOH A 137 537 85 HOH HOH . E 5 HOH A 138 538 23 HOH HOH . E 5 HOH A 139 539 175 HOH HOH . E 5 HOH A 140 540 160 HOH HOH . E 5 HOH A 141 541 155 HOH HOH . E 5 HOH A 142 542 53 HOH HOH . E 5 HOH A 143 543 77 HOH HOH . E 5 HOH A 144 544 188 HOH HOH . E 5 HOH A 145 545 200 HOH HOH . E 5 HOH A 146 546 131 HOH HOH . E 5 HOH A 147 547 162 HOH HOH . E 5 HOH A 148 548 152 HOH HOH . E 5 HOH A 149 549 130 HOH HOH . E 5 HOH A 150 550 108 HOH HOH . E 5 HOH A 151 551 42 HOH HOH . E 5 HOH A 152 552 104 HOH HOH . E 5 HOH A 153 553 123 HOH HOH . E 5 HOH A 154 554 33 HOH HOH . E 5 HOH A 155 555 191 HOH HOH . E 5 HOH A 156 556 179 HOH HOH . E 5 HOH A 157 557 176 HOH HOH . E 5 HOH A 158 558 134 HOH HOH . E 5 HOH A 159 559 172 HOH HOH . E 5 HOH A 160 560 159 HOH HOH . E 5 HOH A 161 561 113 HOH HOH . E 5 HOH A 162 562 163 HOH HOH . E 5 HOH A 163 563 177 HOH HOH . E 5 HOH A 164 564 99 HOH HOH . E 5 HOH A 165 565 124 HOH HOH . E 5 HOH A 166 566 183 HOH HOH . E 5 HOH A 167 567 140 HOH HOH . E 5 HOH A 168 568 122 HOH HOH . E 5 HOH A 169 569 149 HOH HOH . E 5 HOH A 170 570 96 HOH HOH . E 5 HOH A 171 571 144 HOH HOH . E 5 HOH A 172 572 101 HOH HOH . E 5 HOH A 173 573 186 HOH HOH . E 5 HOH A 174 574 174 HOH HOH . E 5 HOH A 175 575 158 HOH HOH . E 5 HOH A 176 576 193 HOH HOH . E 5 HOH A 177 577 66 HOH HOH . E 5 HOH A 178 578 59 HOH HOH . E 5 HOH A 179 579 49 HOH HOH . E 5 HOH A 180 580 197 HOH HOH . E 5 HOH A 181 581 156 HOH HOH . E 5 HOH A 182 582 157 HOH HOH . E 5 HOH A 183 583 143 HOH HOH . E 5 HOH A 184 584 164 HOH HOH . E 5 HOH A 185 585 180 HOH HOH . E 5 HOH A 186 586 94 HOH HOH . E 5 HOH A 187 587 195 HOH HOH . E 5 HOH A 188 588 171 HOH HOH . E 5 HOH A 189 589 80 HOH HOH . E 5 HOH A 190 590 178 HOH HOH . E 5 HOH A 191 591 192 HOH HOH . E 5 HOH A 192 592 199 HOH HOH . E 5 HOH A 193 593 194 HOH HOH . E 5 HOH A 194 594 169 HOH HOH . E 5 HOH A 195 595 117 HOH HOH . E 5 HOH A 196 596 184 HOH HOH . E 5 HOH A 197 597 138 HOH HOH . E 5 HOH A 198 598 136 HOH HOH . E 5 HOH A 199 599 119 HOH HOH . E 5 HOH A 200 600 129 HOH HOH . E 5 HOH A 201 601 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . D 4 25.198 0.05 30.356 1 86.44 ? N1 EPE 303 A 1 HETATM 2 C C2 EPE . . . D 4 23.909 -0.519 30.783 1 83.82 ? C2 EPE 303 A 1 HETATM 3 C C3 EPE . . . D 4 23.324 -1.378 29.669 1 83.52 ? C3 EPE 303 A 1 HETATM 4 N N4 EPE . . . D 4 23.199 -0.637 28.429 1 84.95 ? N4 EPE 303 A 1 HETATM 5 C C5 EPE . . . D 4 24.293 0.234 28.03 1 85.38 ? C5 EPE 303 A 1 HETATM 6 C C6 EPE . . . D 4 24.993 0.937 29.195 1 87.23 ? C6 EPE 303 A 1 HETATM 7 C C7 EPE . . . D 4 22.293 -1.157 27.416 1 84.34 ? C7 EPE 303 A 1 HETATM 8 C C8 EPE . . . D 4 21.966 -0.146 26.321 1 88.6 ? C8 EPE 303 A 1 HETATM 9 O O8 EPE . . . D 4 22.537 -0.547 25.093 1 88.87 ? O8 EPE 303 A 1 HETATM 10 C C9 EPE . . . D 4 25.764 0.855 31.456 1 88.55 ? C9 EPE 303 A 1 HETATM 11 C C10 EPE . . . D 4 25.953 -0.007 32.702 1 87.24 ? C10 EPE 303 A 1 HETATM 12 S S EPE . . . D 4 27.285 0.499 33.824 1 82.61 ? S EPE 303 A 1 HETATM 13 O O1S EPE . . . D 4 27.513 1.936 33.708 1 90.79 ? O1S EPE 303 A 1 HETATM 14 O O2S EPE . . . D 4 28.51 -0.215 33.476 1 84.87 ? O2S EPE 303 A 1 HETATM 15 O O3S EPE . . . D 4 26.914 0.174 35.2 1 79.88 ? O3S EPE 303 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #