data_6SR0 # _model_server_result.job_id Ttvj_LhafzY8I0t009GLAg _model_server_result.datetime_utc '2024-12-20 05:24:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sr0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6SR0 # _exptl.entry_id 6SR0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 157.25 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GADOLINIUM ATOM' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SR0 _cell.length_a 79 _cell.length_b 79 _cell.length_c 39.5 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SR0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 6 1_555 A SG CYS 145 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf2 A SG CYS 48 A CYS 30 1_555 A SG CYS 133 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? disulf ? disulf3 A SG CYS 82 A CYS 64 1_555 A SG CYS 98 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? disulf ? disulf4 A SG CYS 94 A CYS 76 1_555 A SG CYS 112 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc1 A O SER 78 A SER 60 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc2 A O CYS 82 A CYS 64 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc3 A OG SER 90 A SER 72 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc4 A O ARG 91 A ARG 73 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc5 B GD GD . A GD 201 1_555 E O3 DO3 . A DO3 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc6 B GD GD . A GD 201 1_555 E N2 DO3 . A DO3 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc7 B GD GD . A GD 201 1_555 E N3 DO3 . A DO3 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc8 B GD GD . A GD 201 1_555 E O5 DO3 . A DO3 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.959 ? metalc ? metalc9 B GD GD . A GD 201 1_555 E O1 DO3 . A DO3 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? metalc ? metalc10 B GD GD . A GD 201 1_555 E N1 DO3 . A DO3 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc11 B GD GD . A GD 201 1_555 E N4 DO3 . A DO3 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.915 ? metalc ? metalc12 B GD GD . A GD 201 1_555 E O7 DO3 . A DO3 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.097 ? metalc ? metalc13 C GD GD . A GD 202 1_555 D N2 DO3 . A DO3 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? metalc ? metalc14 C GD GD . A GD 202 1_555 D N3 DO3 . A DO3 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.903 ? metalc ? metalc15 C GD GD . A GD 202 1_555 D O3 DO3 . A DO3 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc16 C GD GD . A GD 202 1_555 D O5 DO3 . A DO3 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc17 C GD GD . A GD 202 1_555 D O7 DO3 . A DO3 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc18 C GD GD . A GD 202 1_555 D N1 DO3 . A DO3 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc19 C GD GD . A GD 202 1_555 D N4 DO3 . A DO3 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc20 C GD GD . A GD 202 1_555 D O1 DO3 . A DO3 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc21 C GD GD . A GD 202 1_555 J O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.034 ? metalc ? metalc22 F NA NA . A NA 205 1_555 J O HOH . A HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? metalc ? metalc23 F NA NA . A NA 205 1_555 J O HOH . A HOH 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? # _chem_comp.formula Gd _chem_comp.formula_weight 157.25 _chem_comp.id GD _chem_comp.mon_nstd_flag . _chem_comp.name 'GADOLINIUM ATOM' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6SR0 _atom_sites.fract_transf_matrix[1][1] 0.012658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012658 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025316 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GD A 1 201 201 GD GD . C 2 GD A 1 202 202 GD GD . D 3 DO3 A 1 203 203 DO3 DO3 . E 3 DO3 A 1 204 204 DO3 DO3 . F 4 NA A 1 205 1 NA NA . G 5 CL A 1 206 2 CL CL . H 5 CL A 1 207 3 CL CL . I 5 CL A 1 208 4 CL CL . J 6 HOH A 1 301 11 HOH HOH . J 6 HOH A 2 302 3 HOH HOH . J 6 HOH A 3 303 25 HOH HOH . J 6 HOH A 4 304 26 HOH HOH . J 6 HOH A 5 305 21 HOH HOH . J 6 HOH A 6 306 14 HOH HOH . J 6 HOH A 7 307 18 HOH HOH . J 6 HOH A 8 308 23 HOH HOH . J 6 HOH A 9 309 20 HOH HOH . J 6 HOH A 10 310 5 HOH HOH . J 6 HOH A 11 311 12 HOH HOH . J 6 HOH A 12 312 15 HOH HOH . J 6 HOH A 13 313 4 HOH HOH . J 6 HOH A 14 314 22 HOH HOH . J 6 HOH A 15 315 2 HOH HOH . J 6 HOH A 16 316 24 HOH HOH . J 6 HOH A 17 317 1 HOH HOH . J 6 HOH A 18 318 17 HOH HOH . J 6 HOH A 19 319 16 HOH HOH . J 6 HOH A 20 320 13 HOH HOH . J 6 HOH A 21 321 8 HOH HOH . J 6 HOH A 22 322 7 HOH HOH . J 6 HOH A 23 323 19 HOH HOH . J 6 HOH A 24 324 6 HOH HOH . J 6 HOH A 25 325 9 HOH HOH . J 6 HOH A 26 326 10 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol GD _atom_site.label_atom_id GD _atom_site.label_comp_id GD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 25.378 _atom_site.Cartn_y 1.02 _atom_site.Cartn_z 21.883 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id GD _atom_site.auth_comp_id GD _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #