data_6SR9 # _model_server_result.job_id mbiBhhtJjINhAsJDAPjmBQ _model_server_result.datetime_utc '2025-01-25 07:56:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sr9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 6SR9 # _exptl.entry_id 6SR9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.243 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description trans-oxyresveratrol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.44 _cell.angle_gamma 90 _cell.entry_id 6SR9 _cell.length_a 68.516 _cell.length_b 142.624 _cell.length_c 65.431 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SR9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1,2 B,E,G 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 39.382167 0 58.586991 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H12 O4' _chem_comp.formula_weight 244.243 _chem_comp.id EZE _chem_comp.mon_nstd_flag . _chem_comp.name trans-oxyresveratrol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O14 C13 EZE sing 83 n n C13 C12 EZE doub 84 n y C13 C15 EZE sing 85 n y C12 C10 EZE sing 86 n y C15 C8 EZE doub 87 n y C10 O11 EZE sing 88 n n C10 C9 EZE doub 89 n y C8 C9 EZE sing 90 n y C8 C7 EZE sing 91 n n O17 C16 EZE sing 92 n n C6 C7 EZE doub 93 e n C6 C5 EZE sing 94 n n C16 C5 EZE doub 95 n y C16 C18 EZE sing 96 n y C5 C4 EZE sing 97 n y C18 C2 EZE doub 98 n y C4 C3 EZE doub 99 n y C2 C3 EZE sing 100 n y C2 O1 EZE sing 101 n n C4 H21 EZE sing 102 n n C6 H22 EZE sing 103 n n C7 H23 EZE sing 104 n n C15 H28 EZE sing 105 n n O1 H19 EZE sing 106 n n C3 H20 EZE sing 107 n n C9 H24 EZE sing 108 n n O11 H25 EZE sing 109 n n C12 H26 EZE sing 110 n n O14 H27 EZE sing 111 n n O17 H29 EZE sing 112 n n C18 H30 EZE sing 113 n n # _atom_sites.entry_id 6SR9 _atom_sites.fract_transf_matrix[1][1] 0.014595 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007258 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007011 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017069 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GSH A 1 301 240 GSH GSH . D 3 EZE A 1 302 1 EZE OXR . E 2 GSH B 1 301 240 GSH GSH . F 4 HOH A 1 401 115 HOH HOH . F 4 HOH A 2 402 104 HOH HOH . F 4 HOH A 3 403 144 HOH HOH . F 4 HOH A 4 404 105 HOH HOH . F 4 HOH A 5 405 146 HOH HOH . F 4 HOH A 6 406 57 HOH HOH . F 4 HOH A 7 407 132 HOH HOH . F 4 HOH A 8 408 151 HOH HOH . F 4 HOH A 9 409 40 HOH HOH . F 4 HOH A 10 410 81 HOH HOH . F 4 HOH A 11 411 101 HOH HOH . F 4 HOH A 12 412 123 HOH HOH . F 4 HOH A 13 413 129 HOH HOH . F 4 HOH A 14 414 97 HOH HOH . F 4 HOH A 15 415 1 HOH HOH . F 4 HOH A 16 416 71 HOH HOH . F 4 HOH A 17 417 12 HOH HOH . F 4 HOH A 18 418 15 HOH HOH . F 4 HOH A 19 419 61 HOH HOH . F 4 HOH A 20 420 24 HOH HOH . F 4 HOH A 21 421 125 HOH HOH . F 4 HOH A 22 422 98 HOH HOH . F 4 HOH A 23 423 72 HOH HOH . F 4 HOH A 24 424 108 HOH HOH . F 4 HOH A 25 425 38 HOH HOH . F 4 HOH A 26 426 142 HOH HOH . F 4 HOH A 27 427 116 HOH HOH . F 4 HOH A 28 428 44 HOH HOH . F 4 HOH A 29 429 68 HOH HOH . F 4 HOH A 30 430 86 HOH HOH . F 4 HOH A 31 431 157 HOH HOH . F 4 HOH A 32 432 25 HOH HOH . F 4 HOH A 33 433 119 HOH HOH . F 4 HOH A 34 434 136 HOH HOH . F 4 HOH A 35 435 26 HOH HOH . F 4 HOH A 36 436 76 HOH HOH . F 4 HOH A 37 437 90 HOH HOH . F 4 HOH A 38 438 120 HOH HOH . F 4 HOH A 39 439 83 HOH HOH . F 4 HOH A 40 440 4 HOH HOH . F 4 HOH A 41 441 95 HOH HOH . F 4 HOH A 42 442 145 HOH HOH . F 4 HOH A 43 443 113 HOH HOH . F 4 HOH A 44 444 94 HOH HOH . F 4 HOH A 45 445 63 HOH HOH . F 4 HOH A 46 446 111 HOH HOH . F 4 HOH A 47 447 14 HOH HOH . F 4 HOH A 48 448 29 HOH HOH . F 4 HOH A 49 449 48 HOH HOH . F 4 HOH A 50 450 75 HOH HOH . F 4 HOH A 51 451 58 HOH HOH . F 4 HOH A 52 452 153 HOH HOH . F 4 HOH A 53 453 5 HOH HOH . F 4 HOH A 54 454 2 HOH HOH . F 4 HOH A 55 455 46 HOH HOH . F 4 HOH A 56 456 134 HOH HOH . F 4 HOH A 57 457 6 HOH HOH . F 4 HOH A 58 458 23 HOH HOH . F 4 HOH A 59 459 9 HOH HOH . F 4 HOH A 60 460 67 HOH HOH . F 4 HOH A 61 461 114 HOH HOH . F 4 HOH A 62 462 96 HOH HOH . F 4 HOH A 63 463 85 HOH HOH . F 4 HOH A 64 464 35 HOH HOH . F 4 HOH A 65 465 137 HOH HOH . F 4 HOH A 66 466 51 HOH HOH . F 4 HOH A 67 467 56 HOH HOH . F 4 HOH A 68 468 91 HOH HOH . F 4 HOH A 69 469 19 HOH HOH . F 4 HOH A 70 470 53 HOH HOH . F 4 HOH A 71 471 18 HOH HOH . F 4 HOH A 72 472 127 HOH HOH . F 4 HOH A 73 473 156 HOH HOH . F 4 HOH A 74 474 66 HOH HOH . F 4 HOH A 75 475 65 HOH HOH . F 4 HOH A 76 476 143 HOH HOH . F 4 HOH A 77 477 30 HOH HOH . F 4 HOH A 78 478 47 HOH HOH . F 4 HOH A 79 479 121 HOH HOH . F 4 HOH A 80 480 148 HOH HOH . F 4 HOH A 81 481 11 HOH HOH . F 4 HOH A 82 482 107 HOH HOH . F 4 HOH A 83 483 80 HOH HOH . F 4 HOH A 84 484 138 HOH HOH . F 4 HOH A 85 485 99 HOH HOH . F 4 HOH A 86 486 149 HOH HOH . F 4 HOH A 87 487 62 HOH HOH . F 4 HOH A 88 488 21 HOH HOH . F 4 HOH A 89 489 39 HOH HOH . F 4 HOH A 90 490 159 HOH HOH . F 4 HOH A 91 491 135 HOH HOH . F 4 HOH A 92 492 131 HOH HOH . F 4 HOH A 93 493 158 HOH HOH . F 4 HOH A 94 494 147 HOH HOH . F 4 HOH A 95 495 93 HOH HOH . F 4 HOH A 96 496 110 HOH HOH . F 4 HOH A 97 497 59 HOH HOH . F 4 HOH A 98 498 109 HOH HOH . F 4 HOH A 99 499 42 HOH HOH . F 4 HOH A 100 500 103 HOH HOH . F 4 HOH A 101 501 73 HOH HOH . G 4 HOH B 1 401 152 HOH HOH . G 4 HOH B 2 402 70 HOH HOH . G 4 HOH B 3 403 150 HOH HOH . G 4 HOH B 4 404 37 HOH HOH . G 4 HOH B 5 405 124 HOH HOH . G 4 HOH B 6 406 87 HOH HOH . G 4 HOH B 7 407 34 HOH HOH . G 4 HOH B 8 408 33 HOH HOH . G 4 HOH B 9 409 52 HOH HOH . G 4 HOH B 10 410 20 HOH HOH . G 4 HOH B 11 411 79 HOH HOH . G 4 HOH B 12 412 141 HOH HOH . G 4 HOH B 13 413 28 HOH HOH . G 4 HOH B 14 414 130 HOH HOH . G 4 HOH B 15 415 36 HOH HOH . G 4 HOH B 16 416 41 HOH HOH . G 4 HOH B 17 417 128 HOH HOH . G 4 HOH B 18 418 31 HOH HOH . G 4 HOH B 19 419 155 HOH HOH . G 4 HOH B 20 420 112 HOH HOH . G 4 HOH B 21 421 8 HOH HOH . G 4 HOH B 22 422 84 HOH HOH . G 4 HOH B 23 423 3 HOH HOH . G 4 HOH B 24 424 106 HOH HOH . G 4 HOH B 25 425 102 HOH HOH . G 4 HOH B 26 426 82 HOH HOH . G 4 HOH B 27 427 89 HOH HOH . G 4 HOH B 28 428 54 HOH HOH . G 4 HOH B 29 429 64 HOH HOH . G 4 HOH B 30 430 100 HOH HOH . G 4 HOH B 31 431 140 HOH HOH . G 4 HOH B 32 432 22 HOH HOH . G 4 HOH B 33 433 126 HOH HOH . G 4 HOH B 34 434 50 HOH HOH . G 4 HOH B 35 435 118 HOH HOH . G 4 HOH B 36 436 74 HOH HOH . G 4 HOH B 37 437 122 HOH HOH . G 4 HOH B 38 438 7 HOH HOH . G 4 HOH B 39 439 16 HOH HOH . G 4 HOH B 40 440 77 HOH HOH . G 4 HOH B 41 441 92 HOH HOH . G 4 HOH B 42 442 49 HOH HOH . G 4 HOH B 43 443 60 HOH HOH . G 4 HOH B 44 444 133 HOH HOH . G 4 HOH B 45 445 78 HOH HOH . G 4 HOH B 46 446 10 HOH HOH . G 4 HOH B 47 447 139 HOH HOH . G 4 HOH B 48 448 117 HOH HOH . G 4 HOH B 49 449 27 HOH HOH . G 4 HOH B 50 450 69 HOH HOH . G 4 HOH B 51 451 13 HOH HOH . G 4 HOH B 52 452 55 HOH HOH . G 4 HOH B 53 453 43 HOH HOH . G 4 HOH B 54 454 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 EZE . . . D 3 16.019 -7.168 -3.819 1 40.23 ? C4 EZE 302 A 1 HETATM 2 C C5 EZE . . . D 3 14.895 -7.068 -4.647 1 42.65 ? C5 EZE 302 A 1 HETATM 3 C C6 EZE . . . D 3 14.992 -6.73 -6.074 1 42.96 ? C6 EZE 302 A 1 HETATM 4 C C7 EZE . . . D 3 16.105 -6.515 -6.749 1 42.78 ? C7 EZE 302 A 1 HETATM 5 C C8 EZE . . . D 3 16.182 -6.156 -8.164 1 48.16 ? C8 EZE 302 A 1 HETATM 6 C C10 EZE . . . D 3 15.103 -5.515 -10.229 1 52.97 ? C10 EZE 302 A 1 HETATM 7 C C13 EZE . . . D 3 17.492 -5.533 -10.091 1 54.82 ? C13 EZE 302 A 1 HETATM 8 C C15 EZE . . . D 3 17.427 -5.966 -8.773 1 47.09 ? C15 EZE 302 A 1 HETATM 9 O O1 EZE . . . D 3 14.487 -7.634 -0.526 1 40.13 ? O1 EZE 302 A 1 HETATM 10 C C2 EZE . . . D 3 14.623 -7.484 -1.891 1 43.68 ? C2 EZE 302 A 1 HETATM 11 C C3 EZE . . . D 3 15.887 -7.378 -2.457 1 40.1 ? C3 EZE 302 A 1 HETATM 12 C C9 EZE . . . D 3 15.017 -5.935 -8.906 1 47.81 ? C9 EZE 302 A 1 HETATM 13 O O11 EZE . . . D 3 13.959 -5.309 -10.955 1 49.47 ? O11 EZE 302 A 1 HETATM 14 C C12 EZE . . . D 3 16.338 -5.304 -10.827 1 49.89 ? C12 EZE 302 A 1 HETATM 15 O O14 EZE . . . D 3 18.714 -5.291 -10.657 1 59.08 ? O14 EZE 302 A 1 HETATM 16 C C16 EZE . . . D 3 13.627 -7.227 -4.066 1 45.52 ? C16 EZE 302 A 1 HETATM 17 O O17 EZE . . . D 3 12.514 -7.242 -4.857 1 49.91 ? O17 EZE 302 A 1 HETATM 18 C C18 EZE . . . D 3 13.491 -7.416 -2.697 1 40.39 ? C18 EZE 302 A 1 HETATM 19 H H21 EZE . . . D 3 17.016 -7.08 -4.248 1 48.28 ? H21 EZE 302 A 1 HETATM 20 H H22 EZE . . . D 3 14.042 -6.655 -6.602 1 51.55 ? H22 EZE 302 A 1 HETATM 21 H H23 EZE . . . D 3 17.069 -6.603 -6.251 1 51.33 ? H23 EZE 302 A 1 HETATM 22 H H28 EZE . . . D 3 18.336 -6.161 -8.205 1 56.51 ? H28 EZE 302 A 1 HETATM 23 H H19 EZE . . . D 3 15.393 -7.645 -0.122 1 48.16 ? H19 EZE 302 A 1 HETATM 24 H H20 EZE . . . D 3 16.782 -7.457 -1.842 1 48.12 ? H20 EZE 302 A 1 HETATM 25 H H24 EZE . . . D 3 14.049 -6.097 -8.435 1 57.37 ? H24 EZE 302 A 1 HETATM 26 H H25 EZE . . . D 3 13.182 -5.509 -10.37 1 59.36 ? H25 EZE 302 A 1 HETATM 27 H H26 EZE . . . D 3 16.404 -4.963 -11.859 1 59.87 ? H26 EZE 302 A 1 HETATM 28 H H27 EZE . . . D 3 19.253 -6.119 -10.564 1 70.9 ? H27 EZE 302 A 1 HETATM 29 H H29 EZE . . . D 3 12.586 -8.023 -5.466 1 59.9 ? H29 EZE 302 A 1 HETATM 30 H H30 EZE . . . D 3 12.502 -7.512 -2.252 1 48.47 ? H30 EZE 302 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 30 #