data_6SRL # _model_server_result.job_id KB70Xp4kHp4_YRjlpDvMDA _model_server_result.datetime_utc '2024-11-16 17:40:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6srl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6SRL # _exptl.entry_id 6SRL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'L(+)-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SRL _cell.length_a 57.849 _cell.length_b 57.849 _cell.length_c 150.328 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SRL _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 159 A CYS 159 1_555 A SG CYS 164 A CYS 164 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.749 ? disulf ? disulf2 A SG CYS 159 A CYS 159 1_555 A SG CYS 164 A CYS 164 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.782 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TLA _chem_comp.mon_nstd_flag . _chem_comp.name 'L(+)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TLA doub 285 n n O11 C1 TLA sing 286 n n O11 H11 TLA sing 287 n n C1 C2 TLA sing 288 n n C2 O2 TLA sing 289 n n C2 C3 TLA sing 290 n n C2 H2 TLA sing 291 n n O2 HA TLA sing 292 n n C3 O3 TLA sing 293 n n C3 C4 TLA sing 294 n n C3 H3 TLA sing 295 n n O3 HB TLA sing 296 n n C4 O4 TLA doub 297 n n C4 O41 TLA sing 298 n n O41 H41 TLA sing 299 n n # _atom_sites.entry_id 6SRL _atom_sites.fract_transf_matrix[1][1] 0.017286 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017286 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006652 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TLA A 1 301 301 TLA TLA . C 3 HOH A 1 401 2 HOH HOH . C 3 HOH A 2 402 13 HOH HOH . C 3 HOH A 3 403 93 HOH HOH . C 3 HOH A 4 404 17 HOH HOH . C 3 HOH A 5 405 37 HOH HOH . C 3 HOH A 6 406 49 HOH HOH . C 3 HOH A 7 407 5 HOH HOH . C 3 HOH A 8 408 3 HOH HOH . C 3 HOH A 9 409 7 HOH HOH . C 3 HOH A 10 410 58 HOH HOH . C 3 HOH A 11 411 4 HOH HOH . C 3 HOH A 12 412 53 HOH HOH . C 3 HOH A 13 413 35 HOH HOH . C 3 HOH A 14 414 25 HOH HOH . C 3 HOH A 15 415 18 HOH HOH . C 3 HOH A 16 416 11 HOH HOH . C 3 HOH A 17 417 14 HOH HOH . C 3 HOH A 18 418 24 HOH HOH . C 3 HOH A 19 419 31 HOH HOH . C 3 HOH A 20 420 6 HOH HOH . C 3 HOH A 21 421 74 HOH HOH . C 3 HOH A 22 422 68 HOH HOH . C 3 HOH A 23 423 60 HOH HOH . C 3 HOH A 24 424 12 HOH HOH . C 3 HOH A 25 425 16 HOH HOH . C 3 HOH A 26 426 28 HOH HOH . C 3 HOH A 27 427 52 HOH HOH . C 3 HOH A 28 428 81 HOH HOH . C 3 HOH A 29 429 26 HOH HOH . C 3 HOH A 30 430 15 HOH HOH . C 3 HOH A 31 431 27 HOH HOH . C 3 HOH A 32 432 34 HOH HOH . C 3 HOH A 33 433 30 HOH HOH . C 3 HOH A 34 434 23 HOH HOH . C 3 HOH A 35 435 48 HOH HOH . C 3 HOH A 36 436 19 HOH HOH . C 3 HOH A 37 437 50 HOH HOH . C 3 HOH A 38 438 22 HOH HOH . C 3 HOH A 39 439 32 HOH HOH . C 3 HOH A 40 440 44 HOH HOH . C 3 HOH A 41 441 82 HOH HOH . C 3 HOH A 42 442 46 HOH HOH . C 3 HOH A 43 443 54 HOH HOH . C 3 HOH A 44 444 92 HOH HOH . C 3 HOH A 45 445 20 HOH HOH . C 3 HOH A 46 446 33 HOH HOH . C 3 HOH A 47 447 55 HOH HOH . C 3 HOH A 48 448 38 HOH HOH . C 3 HOH A 49 449 76 HOH HOH . C 3 HOH A 50 450 41 HOH HOH . C 3 HOH A 51 451 63 HOH HOH . C 3 HOH A 52 452 72 HOH HOH . C 3 HOH A 53 453 10 HOH HOH . C 3 HOH A 54 454 21 HOH HOH . C 3 HOH A 55 455 80 HOH HOH . C 3 HOH A 56 456 75 HOH HOH . C 3 HOH A 57 457 9 HOH HOH . C 3 HOH A 58 458 36 HOH HOH . C 3 HOH A 59 459 59 HOH HOH . C 3 HOH A 60 460 39 HOH HOH . C 3 HOH A 61 461 64 HOH HOH . C 3 HOH A 62 462 56 HOH HOH . C 3 HOH A 63 463 61 HOH HOH . C 3 HOH A 64 464 51 HOH HOH . C 3 HOH A 65 465 40 HOH HOH . C 3 HOH A 66 466 67 HOH HOH . C 3 HOH A 67 467 73 HOH HOH . C 3 HOH A 68 468 42 HOH HOH . C 3 HOH A 69 469 86 HOH HOH . C 3 HOH A 70 470 57 HOH HOH . C 3 HOH A 71 471 43 HOH HOH . C 3 HOH A 72 472 66 HOH HOH . C 3 HOH A 73 473 65 HOH HOH . C 3 HOH A 74 474 47 HOH HOH . C 3 HOH A 75 475 62 HOH HOH . C 3 HOH A 76 476 45 HOH HOH . C 3 HOH A 77 477 77 HOH HOH . C 3 HOH A 78 478 83 HOH HOH . C 3 HOH A 79 479 69 HOH HOH . C 3 HOH A 80 480 79 HOH HOH . C 3 HOH A 81 481 78 HOH HOH . C 3 HOH A 82 482 29 HOH HOH . C 3 HOH A 83 483 84 HOH HOH . C 3 HOH A 84 484 70 HOH HOH . C 3 HOH A 85 485 71 HOH HOH . C 3 HOH A 86 486 90 HOH HOH . C 3 HOH A 87 487 85 HOH HOH . C 3 HOH A 88 488 91 HOH HOH . C 3 HOH A 89 489 89 HOH HOH . C 3 HOH A 90 490 87 HOH HOH . C 3 HOH A 91 491 95 HOH HOH . C 3 HOH A 92 492 94 HOH HOH . C 3 HOH A 93 493 88 HOH HOH . C 3 HOH A 94 494 96 HOH HOH . C 3 HOH A 95 495 8 HOH HOH . C 3 HOH A 96 496 98 HOH HOH . C 3 HOH A 97 497 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TLA . . . B 2 12.192 10.5 11.065 1 30.72 ? O1 TLA 301 A 1 HETATM 2 O O11 TLA . . . B 2 12.22 10.592 13.357 1 25.52 ? O11 TLA 301 A 1 HETATM 3 C C1 TLA . . . B 2 12.731 10.267 12.168 1 30.01 ? C1 TLA 301 A 1 HETATM 4 C C2 TLA . . . B 2 14.052 9.518 12.293 1 28.94 ? C2 TLA 301 A 1 HETATM 5 O O2 TLA . . . B 2 14.316 9.155 13.665 1 28.91 ? O2 TLA 301 A 1 HETATM 6 C C3 TLA . . . B 2 15.152 10.471 11.781 1 26.91 ? C3 TLA 301 A 1 HETATM 7 O O3 TLA . . . B 2 15.118 11.69 12.551 1 27.69 ? O3 TLA 301 A 1 HETATM 8 C C4 TLA . . . B 2 16.496 9.774 11.933 1 26.39 ? C4 TLA 301 A 1 HETATM 9 O O4 TLA . . . B 2 16.789 8.777 11.266 1 24.44 ? O4 TLA 301 A 1 HETATM 10 O O41 TLA . . . B 2 17.294 10.366 12.845 1 24.46 ? O41 TLA 301 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #