data_6SRV
#
_model_server_result.job_id            6CwVYtepU_2AH7Fo71QonA 
_model_server_result.datetime_utc      '2025-09-09 17:40:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6srv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":304}' 
#
_entry.id    6SRV 
#
_exptl.entry_id    6SRV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6SRV 
_cell.length_a            172.69 
_cell.length_b            172.69 
_cell.length_c            211.26 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SRV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,Y,EA,GA 1 1 
B,D,S,T,U,V,W,X,Z,AA,BA,CA,DA,FA,HA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 O N N 
? 5 P N N 
? 5 V N N 
? 5 W N N 
? 5 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 26 HHH CYS 22 1_555 A SG CYS 100 HHH CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf2 A SG CYS 151 HHH CYS 140 1_555 A SG CYS 207 HHH CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf3 B SG CYS 26 III CYS 22 1_555 B SG CYS 100 III CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
disulf ? disulf4 B SG CYS 151 III CYS 140 1_555 B SG CYS 207 III CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf5 C SG CYS 26 LLL CYS 23 1_555 C SG CYS 93 LLL CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
disulf ? disulf6 C SG CYS 142 LLL CYS 135 1_555 C SG CYS 201 LLL CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf7 D SG CYS 26 MMM CYS 23 1_555 D SG CYS 93 MMM CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
disulf ? disulf8 D SG CYS 142 MMM CYS 135 1_555 D SG CYS 201 MMM CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 246 n n 
C1 C2 PEG sing 247 n n 
C1 H11 PEG sing 248 n n 
C1 H12 PEG sing 249 n n 
O1 HO1 PEG sing 250 n n 
C2 O2 PEG sing 251 n n 
C2 H21 PEG sing 252 n n 
C2 H22 PEG sing 253 n n 
O2 C3 PEG sing 254 n n 
C3 C4 PEG sing 255 n n 
C3 H31 PEG sing 256 n n 
C3 H32 PEG sing 257 n n 
C4 O4 PEG sing 258 n n 
C4 H41 PEG sing 259 n n 
C4 H42 PEG sing 260 n n 
O4 HO4 PEG sing 261 n n 
#
_atom_sites.entry_id                     6SRV 
_atom_sites.fract_transf_matrix[1][1]    0.005791 
_atom_sites.fract_transf_matrix[1][2]    0.003343 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006687 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004734 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 CL HHH 1 301 1 CL CL . 
F 4 EDO HHH 1 302 1 EDO EDO . 
G 4 EDO HHH 1 303 2 EDO EDO . 
H 4 EDO HHH 1 304 5 EDO EDO . 
I 4 EDO HHH 1 305 6 EDO EDO . 
J 4 EDO HHH 1 306 7 EDO EDO . 
K 4 EDO HHH 1 307 9 EDO EDO . 
L 4 EDO HHH 1 308 11 EDO EDO . 
M 4 EDO HHH 1 309 12 EDO EDO . 
N 4 EDO HHH 1 310 13 EDO EDO . 
O 5 PEG HHH 1 311 3 PEG PEG . 
P 5 PEG HHH 1 312 4 PEG PEG . 
Q 6 TRS HHH 1 313 1 TRS TRS . 
R 6 TRS HHH 1 314 4 TRS TRS . 
S 3 CL III 1 301 2 CL CL . 
T 3 CL III 1 302 3 CL CL . 
U 4 EDO III 1 303 8 EDO EDO . 
V 5 PEG III 1 304 1 PEG PEG . 
W 5 PEG III 1 305 2 PEG PEG . 
X 5 PEG III 1 306 5 PEG PEG . 
Y 6 TRS LLL 1 301 2 TRS TRS . 
Z 4 EDO MMM 1 301 3 EDO EDO . 
AA 4 EDO MMM 1 302 4 EDO EDO . 
BA 4 EDO MMM 1 303 10 EDO EDO . 
CA 4 EDO MMM 1 304 14 EDO EDO . 
DA 6 TRS MMM 1 305 3 TRS TRS . 
EA 7 HOH HHH 1 401 19 HOH HOH . 
EA 7 HOH HHH 2 402 27 HOH HOH . 
EA 7 HOH HHH 3 403 21 HOH HOH . 
EA 7 HOH HHH 4 404 73 HOH HOH . 
EA 7 HOH HHH 5 405 22 HOH HOH . 
EA 7 HOH HHH 6 406 71 HOH HOH . 
EA 7 HOH HHH 7 407 67 HOH HOH . 
EA 7 HOH HHH 8 408 50 HOH HOH . 
EA 7 HOH HHH 9 409 8 HOH HOH . 
EA 7 HOH HHH 10 410 38 HOH HOH . 
EA 7 HOH HHH 11 411 26 HOH HOH . 
EA 7 HOH HHH 12 412 51 HOH HOH . 
EA 7 HOH HHH 13 413 32 HOH HOH . 
EA 7 HOH HHH 14 414 54 HOH HOH . 
EA 7 HOH HHH 15 415 66 HOH HOH . 
EA 7 HOH HHH 16 416 52 HOH HOH . 
EA 7 HOH HHH 17 417 58 HOH HOH . 
EA 7 HOH HHH 18 418 74 HOH HOH . 
EA 7 HOH HHH 19 419 9 HOH HOH . 
EA 7 HOH HHH 20 420 39 HOH HOH . 
FA 7 HOH III 1 401 43 HOH HOH . 
FA 7 HOH III 2 402 18 HOH HOH . 
FA 7 HOH III 3 403 17 HOH HOH . 
FA 7 HOH III 4 404 37 HOH HOH . 
FA 7 HOH III 5 405 5 HOH HOH . 
FA 7 HOH III 6 406 4 HOH HOH . 
FA 7 HOH III 7 407 23 HOH HOH . 
FA 7 HOH III 8 408 77 HOH HOH . 
FA 7 HOH III 9 409 16 HOH HOH . 
FA 7 HOH III 10 410 24 HOH HOH . 
FA 7 HOH III 11 411 60 HOH HOH . 
FA 7 HOH III 12 412 20 HOH HOH . 
FA 7 HOH III 13 413 15 HOH HOH . 
FA 7 HOH III 14 414 61 HOH HOH . 
FA 7 HOH III 15 415 25 HOH HOH . 
FA 7 HOH III 16 416 13 HOH HOH . 
FA 7 HOH III 17 417 63 HOH HOH . 
FA 7 HOH III 18 418 14 HOH HOH . 
FA 7 HOH III 19 419 12 HOH HOH . 
FA 7 HOH III 20 420 75 HOH HOH . 
FA 7 HOH III 21 421 30 HOH HOH . 
FA 7 HOH III 22 422 11 HOH HOH . 
FA 7 HOH III 23 423 6 HOH HOH . 
GA 7 HOH LLL 1 401 72 HOH HOH . 
GA 7 HOH LLL 2 402 42 HOH HOH . 
GA 7 HOH LLL 3 403 1 HOH HOH . 
GA 7 HOH LLL 4 404 46 HOH HOH . 
GA 7 HOH LLL 5 405 28 HOH HOH . 
GA 7 HOH LLL 6 406 2 HOH HOH . 
GA 7 HOH LLL 7 407 59 HOH HOH . 
GA 7 HOH LLL 8 408 44 HOH HOH . 
GA 7 HOH LLL 9 409 65 HOH HOH . 
GA 7 HOH LLL 10 410 41 HOH HOH . 
GA 7 HOH LLL 11 411 53 HOH HOH . 
GA 7 HOH LLL 12 412 40 HOH HOH . 
GA 7 HOH LLL 13 413 45 HOH HOH . 
GA 7 HOH LLL 14 414 33 HOH HOH . 
GA 7 HOH LLL 15 415 10 HOH HOH . 
GA 7 HOH LLL 16 416 34 HOH HOH . 
GA 7 HOH LLL 17 417 64 HOH HOH . 
GA 7 HOH LLL 18 418 57 HOH HOH . 
GA 7 HOH LLL 19 419 31 HOH HOH . 
GA 7 HOH LLL 20 420 7 HOH HOH . 
GA 7 HOH LLL 21 421 70 HOH HOH . 
HA 7 HOH MMM 1 401 35 HOH HOH . 
HA 7 HOH MMM 2 402 48 HOH HOH . 
HA 7 HOH MMM 3 403 78 HOH HOH . 
HA 7 HOH MMM 4 404 68 HOH HOH . 
HA 7 HOH MMM 5 405 49 HOH HOH . 
HA 7 HOH MMM 6 406 3 HOH HOH . 
HA 7 HOH MMM 7 407 76 HOH HOH . 
HA 7 HOH MMM 8 408 47 HOH HOH . 
HA 7 HOH MMM 9 409 62 HOH HOH . 
HA 7 HOH MMM 10 410 36 HOH HOH . 
HA 7 HOH MMM 11 411 55 HOH HOH . 
HA 7 HOH MMM 12 412 29 HOH HOH . 
HA 7 HOH MMM 13 413 56 HOH HOH . 
HA 7 HOH MMM 14 414 69 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . V 5 -8.599 -15.042 63.001 1 79.23 ? C1 PEG 304 III 1 
HETATM 2 O O1 PEG . . . V 5 -7.88 -14.5 64.094 1 80.91 ? O1 PEG 304 III 1 
HETATM 3 C C2 PEG . . . V 5 -8.157 -14.484 61.685 1 79.2 ? C2 PEG 304 III 1 
HETATM 4 O O2 PEG . . . V 5 -6.739 -14.358 61.691 1 87.28 ? O2 PEG 304 III 1 
HETATM 5 C C3 PEG . . . V 5 -6.233 -13.445 60.721 1 94.27 ? C3 PEG 304 III 1 
HETATM 6 C C4 PEG . . . V 5 -5.191 -12.556 61.355 1 93.02 ? C4 PEG 304 III 1 
HETATM 7 O O4 PEG . . . V 5 -4.357 -11.935 60.395 1 84.37 ? O4 PEG 304 III 1 
HETATM 8 H H11 PEG . . . V 5 -9.553 -14.856 63.125 1 79.61 ? H11 PEG 304 III 1 
HETATM 9 H H12 PEG . . . V 5 -8.477 -16.013 62.994 1 79.61 ? H12 PEG 304 III 1 
HETATM 10 H HO1 PEG . . . V 5 -8.117 -14.934 64.846 0 55.65 ? HO1 PEG 304 III 1 
HETATM 11 H H21 PEG . . . V 5 -8.573 -13.609 61.538 1 81.06 ? H21 PEG 304 III 1 
HETATM 12 H H22 PEG . . . V 5 -8.435 -15.083 60.959 1 80.89 ? H22 PEG 304 III 1 
HETATM 13 H H31 PEG . . . V 5 -6.964 -12.895 60.363 1 92.17 ? H31 PEG 304 III 1 
HETATM 14 H H32 PEG . . . V 5 -5.834 -13.944 59.977 1 92.06 ? H32 PEG 304 III 1 
HETATM 15 H H41 PEG . . . V 5 -4.637 -13.092 61.96 1 91.18 ? H41 PEG 304 III 1 
HETATM 16 H H42 PEG . . . V 5 -5.638 -11.864 61.885 1 91.19 ? H42 PEG 304 III 1 
HETATM 17 H HO4 PEG . . . V 5 -4.837 -11.528 59.827 1 86.96 ? HO4 PEG 304 III 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           355 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           17 
#