data_6SSP # _model_server_result.job_id 8iwIZyMHz-DUiFJTW6KkgQ _model_server_result.datetime_utc '2024-11-15 23:29:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ssp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":401}' # _entry.id 6SSP # _exptl.entry_id 6SSP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 71.02 _cell.angle_beta 64.19 _cell.angle_gamma 61.66 _cell.entry_id 6SSP _cell.length_a 121.804 _cell.length_b 122.354 _cell.length_c 128.221 _cell.Z_PDB 10 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SSP _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? hexameric 6 author_defined_assembly 1 ? hexameric 6 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,K,M,N,O,P,Q,R,S,T,U 1 1 F,G,H,I,J,L,V,W,X,Y,Z,AA,BA,CA,DA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 O N N ? 3 R N N ? 3 T N N ? 3 V N N ? 3 W N N ? 3 Y N N ? 3 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 K SG CYS 22 K CYS 22 1_555 K SG CYS 96 K CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 L SG CYS 22 L CYS 22 1_555 L SG CYS 96 L CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A OD1 ASP 109 A ASP 113 1_555 M CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc2 B OD1 ASP 109 B ASP 113 1_555 O CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc3 C OD1 ASP 109 C ASP 113 1_555 R CA CA . C CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc4 D OD1 ASP 154 D ASP 158 1_555 T CA CA . D CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc5 T CA CA . D CA 401 1_555 E OD1 ASP 109 E ASP 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc6 F OD1 ASP 109 F ASP 113 1_555 V CA CA . F CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc7 F OD1 ASN 150 F ASN 154 1_555 W CA CA . F CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc8 F OD1 ASP 154 F ASP 158 1_555 W CA CA . F CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc9 F OD2 ASP 154 F ASP 158 1_555 W CA CA . F CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? metalc ? metalc10 V CA CA . F CA 401 1_555 J OD1 ASP 154 J ASP 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.026 ? metalc ? metalc11 W CA CA . F CA 402 1_555 G OD1 ASP 109 G ASP 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.176 ? metalc ? metalc12 G OD1 ASP 154 G ASP 158 1_555 Y CA CA . G CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc13 Y CA CA . G CA 401 1_555 H OD1 ASP 109 H ASP 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc14 H OD1 ASN 150 H ASN 154 1_555 BA CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.197 ? metalc ? metalc15 H OD1 ASP 154 H ASP 158 1_555 BA CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.019 ? metalc ? metalc16 BA CA CA . H CA 401 1_555 I OD1 ASP 109 I ASP 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6SSP _atom_sites.fract_transf_matrix[1][1] 0.00821 _atom_sites.fract_transf_matrix[1][2] -0.004428 _atom_sites.fract_transf_matrix[1][3] -0.003346 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009286 _atom_sites.fract_transf_matrix[2][3] -0.001405 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008762 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 CA A 1 401 1 CA CA . N 4 UMQ A 1 402 2 UMQ UMQ . O 3 CA B 1 401 2 CA CA . P 4 UMQ B 1 402 1 UMQ UMQ . Q 4 UMQ B 1 403 5 UMQ UMQ . R 3 CA C 1 401 3 CA CA . S 4 UMQ C 1 402 4 UMQ UMQ . T 3 CA D 1 401 4 CA CA . U 4 UMQ E 1 401 3 UMQ UMQ . V 3 CA F 1 401 5 CA CA . W 3 CA F 1 402 6 CA CA . X 4 UMQ F 1 403 7 UMQ UMQ . Y 3 CA G 1 401 7 CA CA . Z 4 UMQ G 1 402 6 UMQ UMQ . AA 4 UMQ G 1 403 10 UMQ UMQ . BA 3 CA H 1 401 8 CA CA . CA 4 UMQ I 1 401 9 UMQ UMQ . DA 4 UMQ J 1 401 8 UMQ UMQ . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id R _atom_site.label_entity_id 3 _atom_site.Cartn_x -35.725 _atom_site.Cartn_y -33.602 _atom_site.Cartn_z -47.114 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 95.12 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 66 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #