data_6SSP
#
_model_server_result.job_id            Qn9qi1liBW-zWBLETUR11g 
_model_server_result.datetime_utc      '2024-11-15 23:41:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ssp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":401}' 
#
_entry.id    6SSP 
#
_exptl.entry_id    6SSP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              496.589 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            UNDECYL-MALTOSIDE 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         71.02 
_cell.angle_beta          64.19 
_cell.angle_gamma         61.66 
_cell.entry_id            6SSP 
_cell.length_a            121.804 
_cell.length_b            122.354 
_cell.length_c            128.221 
_cell.Z_PDB               10 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SSP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? hexameric 6 author_defined_assembly 1 
? hexameric 6 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,K,M,N,O,P,Q,R,S,T,U 1 1 
F,G,H,I,J,L,V,W,X,Y,Z,AA,BA,CA,DA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 N N N 
? 4 P N N 
? 4 Q N N 
? 4 S N N 
? 4 U N N 
? 4 X N N 
? 4 Z N N 
? 4 AA N N 
? 4 CA N N 
? 4 DA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 K SG CYS 22 K CYS 22 1_555 K SG CYS 96 K CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 L SG CYS 22 L CYS 22 1_555 L SG CYS 96 L CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc1 A OD1 ASP 109 A ASP 113 1_555 M CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
metalc ? metalc2 B OD1 ASP 109 B ASP 113 1_555 O CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc3 C OD1 ASP 109 C ASP 113 1_555 R CA CA . C CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? 
metalc ? metalc4 D OD1 ASP 154 D ASP 158 1_555 T CA CA . D CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? 
metalc ? metalc5 T CA CA . D CA 401 1_555 E OD1 ASP 109 E ASP 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? 
metalc ? metalc6 F OD1 ASP 109 F ASP 113 1_555 V CA CA . F CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc7 F OD1 ASN 150 F ASN 154 1_555 W CA CA . F CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
metalc ? metalc8 F OD1 ASP 154 F ASP 158 1_555 W CA CA . F CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? 
metalc ? metalc9 F OD2 ASP 154 F ASP 158 1_555 W CA CA . F CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? 
metalc ? metalc10 V CA CA . F CA 401 1_555 J OD1 ASP 154 J ASP 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.026 ? 
metalc ? metalc11 W CA CA . F CA 402 1_555 G OD1 ASP 109 G ASP 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.176 ? 
metalc ? metalc12 G OD1 ASP 154 G ASP 158 1_555 Y CA CA . G CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? 
metalc ? metalc13 Y CA CA . G CA 401 1_555 H OD1 ASP 109 H ASP 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? 
metalc ? metalc14 H OD1 ASN 150 H ASN 154 1_555 BA CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.197 ? 
metalc ? metalc15 H OD1 ASP 154 H ASP 158 1_555 BA CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.019 ? 
metalc ? metalc16 BA CA CA . H CA 401 1_555 I OD1 ASP 109 I ASP 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
#
_chem_comp.formula           'C23 H44 O11' 
_chem_comp.formula_weight    496.589 
_chem_comp.id                UMQ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              UNDECYL-MALTOSIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     UNDECYL-BETA-D-MALTOPYRANOSIDE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 O2 UMQ sing 356 n n 
C2 C1 UMQ sing 357 n n 
C2 C3 UMQ sing 358 n n 
C2 H21 UMQ sing 359 n n 
C4 C5 UMQ sing 360 n n 
C4 O4 UMQ sing 361 n n 
C4 C3 UMQ sing 362 n n 
C4 H41 UMQ sing 363 n n 
C5 C6 UMQ sing 364 n n 
C5 O5 UMQ sing 365 n n 
C5 H51 UMQ sing 366 n n 
C6 O6 UMQ sing 367 n n 
C6 H61 UMQ sing 368 n n 
C6 H62 UMQ sing 369 n n 
O2 HO21 UMQ sing 370 n n 
O4 HO41 UMQ sing 371 n n 
C1 O1 UMQ sing 372 n n 
C1 O5 UMQ sing 373 n n 
C1 H11 UMQ sing 374 n n 
C3 O3 UMQ sing 375 n n 
C3 H31 UMQ sing 376 n n 
O1 C4' UMQ sing 377 n n 
O3 HO31 UMQ sing 378 n n 
O6 HO61 UMQ sing 379 n n 
C1' C2' UMQ sing 380 n n 
C1' O1' UMQ sing 381 n n 
C1' O5' UMQ sing 382 n n 
C1' "H1'1" UMQ sing 383 n n 
C2' C3' UMQ sing 384 n n 
C2' O2' UMQ sing 385 n n 
C2' "H2'1" UMQ sing 386 n n 
C3' C4' UMQ sing 387 n n 
C3' O3' UMQ sing 388 n n 
C3' "H3'1" UMQ sing 389 n n 
C4' C5' UMQ sing 390 n n 
C4' "H4'1" UMQ sing 391 n n 
C5' C6' UMQ sing 392 n n 
C5' O5' UMQ sing 393 n n 
C5' "H5'1" UMQ sing 394 n n 
C6' O6' UMQ sing 395 n n 
C6' "H6'1" UMQ sing 396 n n 
C6' "H6'2" UMQ sing 397 n n 
O1' CA UMQ sing 398 n n 
O3' HO3' UMQ sing 399 n n 
O6' HO6' UMQ sing 400 n n 
O2' HO2' UMQ sing 401 n n 
CA CB UMQ sing 402 n n 
CA HA1 UMQ sing 403 n n 
CA HA2 UMQ sing 404 n n 
CB CC UMQ sing 405 n n 
CB HB1 UMQ sing 406 n n 
CB HB2 UMQ sing 407 n n 
CC CD UMQ sing 408 n n 
CC HC1 UMQ sing 409 n n 
CC HC2 UMQ sing 410 n n 
CD CF UMQ sing 411 n n 
CD HD1 UMQ sing 412 n n 
CD HD2 UMQ sing 413 n n 
CF CG UMQ sing 414 n n 
CF HF1 UMQ sing 415 n n 
CF HF2 UMQ sing 416 n n 
CG CH UMQ sing 417 n n 
CG HG1 UMQ sing 418 n n 
CG HG2 UMQ sing 419 n n 
CH CI UMQ sing 420 n n 
CH HH1 UMQ sing 421 n n 
CH HH2 UMQ sing 422 n n 
CI CJ UMQ sing 423 n n 
CI HI1 UMQ sing 424 n n 
CI HI2 UMQ sing 425 n n 
CJ CK UMQ sing 426 n n 
CJ HJ1 UMQ sing 427 n n 
CJ HJ2 UMQ sing 428 n n 
CK CL UMQ sing 429 n n 
CK HK1 UMQ sing 430 n n 
CK HK2 UMQ sing 431 n n 
CL HL1 UMQ sing 432 n n 
CL HL2 UMQ sing 433 n n 
CL HL3 UMQ sing 434 n n 
#
_atom_sites.entry_id                     6SSP 
_atom_sites.fract_transf_matrix[1][1]    0.00821 
_atom_sites.fract_transf_matrix[1][2]    -0.004428 
_atom_sites.fract_transf_matrix[1][3]    -0.003346 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009286 
_atom_sites.fract_transf_matrix[2][3]    -0.001405 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008762 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 3 CA A 1 401 1 CA CA . 
N 4 UMQ A 1 402 2 UMQ UMQ . 
O 3 CA B 1 401 2 CA CA . 
P 4 UMQ B 1 402 1 UMQ UMQ . 
Q 4 UMQ B 1 403 5 UMQ UMQ . 
R 3 CA C 1 401 3 CA CA . 
S 4 UMQ C 1 402 4 UMQ UMQ . 
T 3 CA D 1 401 4 CA CA . 
U 4 UMQ E 1 401 3 UMQ UMQ . 
V 3 CA F 1 401 5 CA CA . 
W 3 CA F 1 402 6 CA CA . 
X 4 UMQ F 1 403 7 UMQ UMQ . 
Y 3 CA G 1 401 7 CA CA . 
Z 4 UMQ G 1 402 6 UMQ UMQ . 
AA 4 UMQ G 1 403 10 UMQ UMQ . 
BA 3 CA H 1 401 8 CA CA . 
CA 4 UMQ I 1 401 9 UMQ UMQ . 
DA 4 UMQ J 1 401 8 UMQ UMQ . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 UMQ . . . U 4 -13.891 -59.771 -7.39 1 148.47 ? C2 UMQ 401 E 1 
HETATM 2 C C4 UMQ . . . U 4 -13.13 -62.149 -6.931 1 149.24 ? C4 UMQ 401 E 1 
HETATM 3 C C5 UMQ . . . U 4 -11.973 -61.901 -7.898 1 148.96 ? C5 UMQ 401 E 1 
HETATM 4 C C6 UMQ . . . U 4 -11.515 -63.144 -8.643 1 149.06 ? C6 UMQ 401 E 1 
HETATM 5 O O2 UMQ . . . U 4 -14.152 -58.501 -6.805 1 149.72 ? O2 UMQ 401 E 1 
HETATM 6 O O4 UMQ . . . U 4 -12.734 -63.053 -5.903 1 149.45 ? O4 UMQ 401 E 1 
HETATM 7 C C1 UMQ . . . U 4 -12.724 -59.65 -8.37 1 147.37 ? C1 UMQ 401 E 1 
HETATM 8 C C3 UMQ . . . U 4 -13.625 -60.835 -6.319 1 149.17 ? C3 UMQ 401 E 1 
HETATM 9 O O1 UMQ . . . U 4 -11.652 -58.944 -7.758 1 145.96 ? O1 UMQ 401 E 1 
HETATM 10 O O3 UMQ . . . U 4 -14.828 -61.071 -5.595 1 150.61 ? O3 UMQ 401 E 1 
HETATM 11 O O5 UMQ . . . U 4 -12.347 -60.925 -8.888 1 147.53 ? O5 UMQ 401 E 1 
HETATM 12 O O6 UMQ . . . U 4 -12.608 -63.87 -9.196 1 150.46 ? O6 UMQ 401 E 1 
HETATM 13 C C1' UMQ . . . U 4 -8.08 -57.344 -8.97 1 143.33 ? C1' UMQ 401 E 1 
HETATM 14 C C2' UMQ . . . U 4 -8.897 -57.931 -10.109 1 146.76 ? C2' UMQ 401 E 1 
HETATM 15 C C3' UMQ . . . U 4 -10.31 -58.27 -9.638 1 147.92 ? C3' UMQ 401 E 1 
HETATM 16 C C4' UMQ . . . U 4 -10.325 -59.04 -8.312 1 147.65 ? C4' UMQ 401 E 1 
HETATM 17 C C5' UMQ . . . U 4 -9.332 -58.488 -7.285 1 147.92 ? C5' UMQ 401 E 1 
HETATM 18 C C6' UMQ . . . U 4 -9.09 -59.381 -6.082 1 149.13 ? C6' UMQ 401 E 1 
HETATM 19 O O1' UMQ . . . U 4 -6.807 -57.056 -9.472 1 138.3 ? O1' UMQ 401 E 1 
HETATM 20 O O3' UMQ . . . U 4 -10.966 -59.024 -10.656 1 147.91 ? O3' UMQ 401 E 1 
HETATM 21 O O5' UMQ . . . U 4 -8.045 -58.26 -7.89 1 145.05 ? O5' UMQ 401 E 1 
HETATM 22 O O6' UMQ . . . U 4 -10.291 -59.788 -5.439 1 150.25 ? O6' UMQ 401 E 1 
HETATM 23 O O2' UMQ . . . U 4 -8.96 -56.958 -11.138 1 146.86 ? O2' UMQ 401 E 1 
HETATM 24 C CA UMQ . . . U 4 -5.975 -56.346 -8.554 1 133.64 ? CA UMQ 401 E 1 
HETATM 25 C CB UMQ . . . U 4 -5.122 -55.369 -9.322 1 129.45 ? CB UMQ 401 E 1 
HETATM 26 C CC UMQ . . . U 4 -3.687 -55.338 -8.831 1 126.26 ? CC UMQ 401 E 1 
HETATM 27 C CD UMQ . . . U 4 -3.186 -53.962 -8.439 1 124.04 ? CD UMQ 401 E 1 
HETATM 28 C CF UMQ . . . U 4 -1.794 -53.949 -7.831 1 122.18 ? CF UMQ 401 E 1 
HETATM 29 C CG UMQ . . . U 4 -1.473 -52.682 -7.058 1 120.97 ? CG UMQ 401 E 1 
HETATM 30 C CH UMQ . . . U 4 0.008 -52.41 -6.862 1 120.58 ? CH UMQ 401 E 1 
HETATM 31 C CI UMQ . . . U 4 0.312 -51.07 -6.21 1 120.78 ? CI UMQ 401 E 1 
HETATM 32 C CJ UMQ . . . U 4 1.771 -50.657 -6.282 1 120.83 ? CJ UMQ 401 E 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    116 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           32 
#