data_6SSQ # _model_server_result.job_id JSEBrStVzdejw3pvlgpCXA _model_server_result.datetime_utc '2024-11-28 04:47:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ssq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":503}' # _entry.id 6SSQ # _exptl.entry_id 6SSQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SSQ _cell.length_a 58.209 _cell.length_b 85.296 _cell.length_c 109.29 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SSQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 212 n n C1 C2 GOL sing 213 n n C1 H11 GOL sing 214 n n C1 H12 GOL sing 215 n n O1 HO1 GOL sing 216 n n C2 O2 GOL sing 217 n n C2 C3 GOL sing 218 n n C2 H2 GOL sing 219 n n O2 HO2 GOL sing 220 n n C3 O3 GOL sing 221 n n C3 H31 GOL sing 222 n n C3 H32 GOL sing 223 n n O3 HO3 GOL sing 224 n n # _atom_sites.entry_id 6SSQ _atom_sites.fract_transf_matrix[1][1] 0.017179 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011724 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00915 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 754 A 1 501 1 754 754 . F 4 FLC A 1 502 1 FLC FLC . G 5 GOL A 1 503 1 GOL GOL . H 3 754 B 1 501 1 754 754 . I 6 HOH A 1 601 74 HOH HOH . I 6 HOH A 2 602 45 HOH HOH . I 6 HOH A 3 603 99 HOH HOH . I 6 HOH A 4 604 103 HOH HOH . I 6 HOH A 5 605 21 HOH HOH . I 6 HOH A 6 606 86 HOH HOH . I 6 HOH A 7 607 32 HOH HOH . I 6 HOH A 8 608 4 HOH HOH . I 6 HOH A 9 609 128 HOH HOH . I 6 HOH A 10 610 122 HOH HOH . I 6 HOH A 11 611 79 HOH HOH . I 6 HOH A 12 612 18 HOH HOH . I 6 HOH A 13 613 93 HOH HOH . I 6 HOH A 14 614 53 HOH HOH . I 6 HOH A 15 615 61 HOH HOH . I 6 HOH A 16 616 36 HOH HOH . I 6 HOH A 17 617 121 HOH HOH . I 6 HOH A 18 618 1 HOH HOH . I 6 HOH A 19 619 9 HOH HOH . I 6 HOH A 20 620 30 HOH HOH . I 6 HOH A 21 621 85 HOH HOH . I 6 HOH A 22 622 22 HOH HOH . I 6 HOH A 23 623 2 HOH HOH . I 6 HOH A 24 624 19 HOH HOH . I 6 HOH A 25 625 26 HOH HOH . I 6 HOH A 26 626 5 HOH HOH . I 6 HOH A 27 627 8 HOH HOH . I 6 HOH A 28 628 12 HOH HOH . I 6 HOH A 29 629 80 HOH HOH . I 6 HOH A 30 630 67 HOH HOH . I 6 HOH A 31 631 6 HOH HOH . I 6 HOH A 32 632 81 HOH HOH . I 6 HOH A 33 633 43 HOH HOH . I 6 HOH A 34 634 59 HOH HOH . I 6 HOH A 35 635 17 HOH HOH . I 6 HOH A 36 636 27 HOH HOH . I 6 HOH A 37 637 44 HOH HOH . I 6 HOH A 38 638 71 HOH HOH . I 6 HOH A 39 639 65 HOH HOH . I 6 HOH A 40 640 10 HOH HOH . I 6 HOH A 41 641 11 HOH HOH . I 6 HOH A 42 642 90 HOH HOH . I 6 HOH A 43 643 102 HOH HOH . I 6 HOH A 44 644 28 HOH HOH . I 6 HOH A 45 645 87 HOH HOH . I 6 HOH A 46 646 38 HOH HOH . I 6 HOH A 47 647 60 HOH HOH . I 6 HOH A 48 648 20 HOH HOH . I 6 HOH A 49 649 46 HOH HOH . I 6 HOH A 50 650 16 HOH HOH . I 6 HOH A 51 651 50 HOH HOH . I 6 HOH A 52 652 130 HOH HOH . I 6 HOH A 53 653 42 HOH HOH . I 6 HOH A 54 654 15 HOH HOH . I 6 HOH A 55 655 114 HOH HOH . I 6 HOH A 56 656 13 HOH HOH . I 6 HOH A 57 657 84 HOH HOH . I 6 HOH A 58 658 116 HOH HOH . I 6 HOH A 59 659 58 HOH HOH . I 6 HOH A 60 660 123 HOH HOH . I 6 HOH A 61 661 72 HOH HOH . I 6 HOH A 62 662 57 HOH HOH . I 6 HOH A 63 663 48 HOH HOH . I 6 HOH A 64 664 88 HOH HOH . I 6 HOH A 65 665 40 HOH HOH . I 6 HOH A 66 666 39 HOH HOH . I 6 HOH A 67 667 112 HOH HOH . I 6 HOH A 68 668 64 HOH HOH . I 6 HOH A 69 669 129 HOH HOH . I 6 HOH A 70 670 62 HOH HOH . I 6 HOH A 71 671 68 HOH HOH . I 6 HOH A 72 672 105 HOH HOH . I 6 HOH A 73 673 41 HOH HOH . I 6 HOH A 74 674 132 HOH HOH . I 6 HOH A 75 675 120 HOH HOH . I 6 HOH A 76 676 82 HOH HOH . I 6 HOH A 77 677 101 HOH HOH . I 6 HOH A 78 678 96 HOH HOH . I 6 HOH A 79 679 108 HOH HOH . I 6 HOH A 80 680 113 HOH HOH . I 6 HOH A 81 681 104 HOH HOH . J 6 HOH B 1 601 63 HOH HOH . J 6 HOH B 2 602 124 HOH HOH . J 6 HOH B 3 603 7 HOH HOH . J 6 HOH B 4 604 109 HOH HOH . J 6 HOH B 5 605 126 HOH HOH . J 6 HOH B 6 606 110 HOH HOH . J 6 HOH B 7 607 33 HOH HOH . J 6 HOH B 8 608 56 HOH HOH . J 6 HOH B 9 609 31 HOH HOH . J 6 HOH B 10 610 98 HOH HOH . J 6 HOH B 11 611 35 HOH HOH . J 6 HOH B 12 612 92 HOH HOH . J 6 HOH B 13 613 3 HOH HOH . J 6 HOH B 14 614 66 HOH HOH . J 6 HOH B 15 615 75 HOH HOH . J 6 HOH B 16 616 107 HOH HOH . J 6 HOH B 17 617 47 HOH HOH . J 6 HOH B 18 618 34 HOH HOH . J 6 HOH B 19 619 54 HOH HOH . J 6 HOH B 20 620 14 HOH HOH . J 6 HOH B 21 621 37 HOH HOH . J 6 HOH B 22 622 49 HOH HOH . J 6 HOH B 23 623 91 HOH HOH . J 6 HOH B 24 624 94 HOH HOH . J 6 HOH B 25 625 97 HOH HOH . J 6 HOH B 26 626 70 HOH HOH . J 6 HOH B 27 627 24 HOH HOH . J 6 HOH B 28 628 89 HOH HOH . J 6 HOH B 29 629 55 HOH HOH . J 6 HOH B 30 630 76 HOH HOH . J 6 HOH B 31 631 51 HOH HOH . J 6 HOH B 32 632 52 HOH HOH . J 6 HOH B 33 633 119 HOH HOH . J 6 HOH B 34 634 118 HOH HOH . J 6 HOH B 35 635 29 HOH HOH . J 6 HOH B 36 636 127 HOH HOH . J 6 HOH B 37 637 100 HOH HOH . J 6 HOH B 38 638 131 HOH HOH . K 6 HOH F 1 701 83 HOH HOH . L 6 HOH G 1 701 23 HOH HOH . L 6 HOH G 2 702 115 HOH HOH . L 6 HOH G 3 703 125 HOH HOH . L 6 HOH G 4 704 69 HOH HOH . L 6 HOH G 5 705 77 HOH HOH . L 6 HOH G 6 706 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 5 52.75 -12.211 -4.056 1 67.97 ? C1 GOL 503 A 1 HETATM 2 O O1 GOL . . . G 5 52.136 -12.159 -2.799 1 66.73 ? O1 GOL 503 A 1 HETATM 3 C C2 GOL . . . G 5 53.779 -13.354 -3.994 1 68.56 ? C2 GOL 503 A 1 HETATM 4 O O2 GOL . . . G 5 54.264 -13.528 -2.703 1 75.1 ? O2 GOL 503 A 1 HETATM 5 C C3 GOL . . . G 5 53.03 -14.604 -4.514 1 60.04 ? C3 GOL 503 A 1 HETATM 6 O O3 GOL . . . G 5 53.639 -15.738 -3.92 1 56.62 ? O3 GOL 503 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #