data_6ST7 # _model_server_result.job_id ppI31t-iAnQ2i2w8RNbrxA _model_server_result.datetime_utc '2024-11-28 23:26:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6st7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6ST7 # _exptl.entry_id 6ST7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6ST7 _cell.length_a 86.83 _cell.length_b 86.83 _cell.length_c 114.56 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ST7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -19.093333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 304 n n N H TRP sing 305 n n N H2 TRP sing 306 n n CA C TRP sing 307 n n CA CB TRP sing 308 n n CA HA TRP sing 309 n n C O TRP doub 310 n n C OXT TRP sing 311 n n CB CG TRP sing 312 n n CB HB2 TRP sing 313 n n CB HB3 TRP sing 314 n n CG CD1 TRP doub 315 n y CG CD2 TRP sing 316 n y CD1 NE1 TRP sing 317 n y CD1 HD1 TRP sing 318 n n CD2 CE2 TRP doub 319 n y CD2 CE3 TRP sing 320 n y NE1 CE2 TRP sing 321 n y NE1 HE1 TRP sing 322 n n CE2 CZ2 TRP sing 323 n y CE3 CZ3 TRP doub 324 n y CE3 HE3 TRP sing 325 n n CZ2 CH2 TRP doub 326 n y CZ2 HZ2 TRP sing 327 n n CZ3 CH2 TRP sing 328 n y CZ3 HZ3 TRP sing 329 n n CH2 HH2 TRP sing 330 n n OXT HXT TRP sing 331 n n # _atom_sites.entry_id 6ST7 _atom_sites.fract_transf_matrix[1][1] 0.011517 _atom_sites.fract_transf_matrix[1][2] 0.006649 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013298 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008729 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRP A 1 201 201 TRP TRP . C 3 IPA A 1 202 202 IPA IPA . D 4 HOH A 1 301 302 HOH HOH . D 4 HOH A 2 302 303 HOH HOH . D 4 HOH A 3 303 304 HOH HOH . D 4 HOH A 4 304 301 HOH HOH . D 4 HOH A 5 305 309 HOH HOH . D 4 HOH A 6 306 305 HOH HOH . D 4 HOH A 7 307 308 HOH HOH . D 4 HOH A 8 308 306 HOH HOH . D 4 HOH A 9 309 307 HOH HOH . D 4 HOH A 10 310 310 HOH HOH . D 4 HOH A 11 311 317 HOH HOH . D 4 HOH A 12 312 311 HOH HOH . D 4 HOH A 13 313 313 HOH HOH . D 4 HOH A 14 314 312 HOH HOH . D 4 HOH A 15 315 315 HOH HOH . D 4 HOH A 16 316 314 HOH HOH . D 4 HOH A 17 317 318 HOH HOH . D 4 HOH A 18 318 316 HOH HOH . D 4 HOH A 19 319 319 HOH HOH . D 4 HOH A 20 320 320 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . B 2 -4.217 52.651 18.907 1 81.33 ? N TRP 201 A 1 HETATM 2 C CA TRP . . . B 2 -5.609 52.783 18.492 1 78.75 ? CA TRP 201 A 1 HETATM 3 C C TRP . . . B 2 -6.458 51.682 19.117 1 71.01 ? C TRP 201 A 1 HETATM 4 O O TRP . . . B 2 -7.686 51.758 19.134 1 77.3 ? O TRP 201 A 1 HETATM 5 C CB TRP . . . B 2 -5.723 52.741 16.967 1 83.68 ? CB TRP 201 A 1 HETATM 6 C CG TRP . . . B 2 -7.029 53.258 16.441 1 71.85 ? CG TRP 201 A 1 HETATM 7 C CD1 TRP . . . B 2 -8.179 52.548 16.252 1 74.8 ? CD1 TRP 201 A 1 HETATM 8 C CD2 TRP . . . B 2 -7.314 54.6 16.032 1 58.54 ? CD2 TRP 201 A 1 HETATM 9 N NE1 TRP . . . B 2 -9.164 53.367 15.754 1 73.43 ? NE1 TRP 201 A 1 HETATM 10 C CE2 TRP . . . B 2 -8.658 54.632 15.609 1 57.49 ? CE2 TRP 201 A 1 HETATM 11 C CE3 TRP . . . B 2 -6.565 55.778 15.985 1 65.94 ? CE3 TRP 201 A 1 HETATM 12 C CZ2 TRP . . . B 2 -9.265 55.795 15.143 1 65.1 ? CZ2 TRP 201 A 1 HETATM 13 C CZ3 TRP . . . B 2 -7.17 56.929 15.522 1 61.35 ? CZ3 TRP 201 A 1 HETATM 14 C CH2 TRP . . . B 2 -8.507 56.931 15.111 1 66.08 ? CH2 TRP 201 A 1 HETATM 15 O OXT TRP . . . B 2 -5.932 50.69 19.621 1 81.99 ? OXT TRP 201 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #