data_6SUG # _model_server_result.job_id uZGSvQDKDygSqzuXTXvJtw _model_server_result.datetime_utc '2024-11-29 23:23:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sug # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 6SUG # _exptl.entry_id 6SUG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 257.241 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-deoxytolcapone _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SUG _cell.length_a 43.012 _cell.length_b 85.559 _cell.length_c 64.529 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SUG _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 43.012 85.559 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C14 H11 N O4' _chem_comp.formula_weight 257.241 _chem_comp.id LVB _chem_comp.mon_nstd_flag . _chem_comp.name 3-deoxytolcapone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C17 LVB sing 175 n n C16 C17 LVB doub 176 n y C16 C15 LVB sing 177 n y C17 C18 LVB sing 178 n y C15 C14 LVB doub 179 n y C18 C19 LVB doub 180 n y C14 C19 LVB sing 181 n y C14 C12 LVB sing 182 n n O13 C12 LVB doub 183 n n C12 C4 LVB sing 184 n n C4 C3 LVB doub 185 n y C4 C5 LVB sing 186 n y C3 C2 LVB sing 187 n y C5 C6 LVB doub 188 n y O10 N9 LVB doub 189 n n C2 C1 LVB doub 190 n y C6 N9 LVB sing 191 n n C6 C1 LVB sing 192 n y N9 O11 LVB sing 193 n n C1 O8 LVB sing 194 n n C2 H1 LVB sing 195 n n C3 H2 LVB sing 196 n n C5 H3 LVB sing 197 n n O8 H4 LVB sing 198 n n C15 H5 LVB sing 199 n n C16 H6 LVB sing 200 n n C20 H7 LVB sing 201 n n C20 H8 LVB sing 202 n n C20 H9 LVB sing 203 n n C18 H10 LVB sing 204 n n C19 H11 LVB sing 205 n n # _atom_sites.entry_id 6SUG _atom_sites.fract_transf_matrix[1][1] 0.023249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011688 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015497 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LVB A 1 201 201 LVB 108 . D 2 LVB B 1 201 201 LVB 108 . E 3 HOH A 1 301 314 HOH HOH . E 3 HOH A 2 302 126 HOH HOH . E 3 HOH A 3 303 49 HOH HOH . E 3 HOH A 4 304 339 HOH HOH . E 3 HOH A 5 305 165 HOH HOH . E 3 HOH A 6 306 294 HOH HOH . E 3 HOH A 7 307 257 HOH HOH . E 3 HOH A 8 308 90 HOH HOH . E 3 HOH A 9 309 256 HOH HOH . E 3 HOH A 10 310 22 HOH HOH . E 3 HOH A 11 311 4 HOH HOH . E 3 HOH A 12 312 144 HOH HOH . E 3 HOH A 13 313 6 HOH HOH . E 3 HOH A 14 314 185 HOH HOH . E 3 HOH A 15 315 192 HOH HOH . E 3 HOH A 16 316 43 HOH HOH . E 3 HOH A 17 317 153 HOH HOH . E 3 HOH A 18 318 209 HOH HOH . E 3 HOH A 19 319 147 HOH HOH . E 3 HOH A 20 320 322 HOH HOH . E 3 HOH A 21 321 68 HOH HOH . E 3 HOH A 22 322 64 HOH HOH . E 3 HOH A 23 323 320 HOH HOH . E 3 HOH A 24 324 141 HOH HOH . E 3 HOH A 25 325 94 HOH HOH . E 3 HOH A 26 326 223 HOH HOH . E 3 HOH A 27 327 260 HOH HOH . E 3 HOH A 28 328 275 HOH HOH . E 3 HOH A 29 329 11 HOH HOH . E 3 HOH A 30 330 14 HOH HOH . E 3 HOH A 31 331 81 HOH HOH . E 3 HOH A 32 332 286 HOH HOH . E 3 HOH A 33 333 74 HOH HOH . E 3 HOH A 34 334 151 HOH HOH . E 3 HOH A 35 335 142 HOH HOH . E 3 HOH A 36 336 284 HOH HOH . E 3 HOH A 37 337 187 HOH HOH . E 3 HOH A 38 338 197 HOH HOH . E 3 HOH A 39 339 154 HOH HOH . E 3 HOH A 40 340 140 HOH HOH . E 3 HOH A 41 341 146 HOH HOH . E 3 HOH A 42 342 258 HOH HOH . E 3 HOH A 43 343 37 HOH HOH . E 3 HOH A 44 344 1 HOH HOH . E 3 HOH A 45 345 201 HOH HOH . E 3 HOH A 46 346 62 HOH HOH . E 3 HOH A 47 347 31 HOH HOH . E 3 HOH A 48 348 73 HOH HOH . E 3 HOH A 49 349 83 HOH HOH . E 3 HOH A 50 350 123 HOH HOH . E 3 HOH A 51 351 33 HOH HOH . E 3 HOH A 52 352 148 HOH HOH . E 3 HOH A 53 353 303 HOH HOH . E 3 HOH A 54 354 326 HOH HOH . E 3 HOH A 55 355 16 HOH HOH . E 3 HOH A 56 356 61 HOH HOH . E 3 HOH A 57 357 100 HOH HOH . E 3 HOH A 58 358 26 HOH HOH . E 3 HOH A 59 359 143 HOH HOH . E 3 HOH A 60 360 32 HOH HOH . E 3 HOH A 61 361 63 HOH HOH . E 3 HOH A 62 362 305 HOH HOH . E 3 HOH A 63 363 335 HOH HOH . E 3 HOH A 64 364 150 HOH HOH . E 3 HOH A 65 365 152 HOH HOH . E 3 HOH A 66 366 30 HOH HOH . E 3 HOH A 67 367 222 HOH HOH . E 3 HOH A 68 368 21 HOH HOH . E 3 HOH A 69 369 8 HOH HOH . E 3 HOH A 70 370 280 HOH HOH . E 3 HOH A 71 371 51 HOH HOH . E 3 HOH A 72 372 82 HOH HOH . E 3 HOH A 73 373 19 HOH HOH . E 3 HOH A 74 374 29 HOH HOH . E 3 HOH A 75 375 156 HOH HOH . E 3 HOH A 76 376 87 HOH HOH . E 3 HOH A 77 377 52 HOH HOH . E 3 HOH A 78 378 5 HOH HOH . E 3 HOH A 79 379 194 HOH HOH . E 3 HOH A 80 380 161 HOH HOH . E 3 HOH A 81 381 135 HOH HOH . E 3 HOH A 82 382 28 HOH HOH . E 3 HOH A 83 383 296 HOH HOH . E 3 HOH A 84 384 188 HOH HOH . E 3 HOH A 85 385 132 HOH HOH . E 3 HOH A 86 386 235 HOH HOH . E 3 HOH A 87 387 66 HOH HOH . E 3 HOH A 88 388 65 HOH HOH . E 3 HOH A 89 389 69 HOH HOH . E 3 HOH A 90 390 84 HOH HOH . E 3 HOH A 91 391 239 HOH HOH . E 3 HOH A 92 392 85 HOH HOH . E 3 HOH A 93 393 299 HOH HOH . E 3 HOH A 94 394 118 HOH HOH . E 3 HOH A 95 395 321 HOH HOH . E 3 HOH A 96 396 46 HOH HOH . E 3 HOH A 97 397 272 HOH HOH . E 3 HOH A 98 398 338 HOH HOH . E 3 HOH A 99 399 67 HOH HOH . E 3 HOH A 100 400 99 HOH HOH . E 3 HOH A 101 401 226 HOH HOH . E 3 HOH A 102 402 293 HOH HOH . E 3 HOH A 103 403 227 HOH HOH . E 3 HOH A 104 404 42 HOH HOH . E 3 HOH A 105 405 117 HOH HOH . E 3 HOH A 106 406 336 HOH HOH . E 3 HOH A 107 407 34 HOH HOH . E 3 HOH A 108 408 106 HOH HOH . E 3 HOH A 109 409 17 HOH HOH . E 3 HOH A 110 410 133 HOH HOH . E 3 HOH A 111 411 205 HOH HOH . E 3 HOH A 112 412 23 HOH HOH . E 3 HOH A 113 413 95 HOH HOH . E 3 HOH A 114 414 283 HOH HOH . E 3 HOH A 115 415 288 HOH HOH . E 3 HOH A 116 416 204 HOH HOH . E 3 HOH A 117 417 334 HOH HOH . E 3 HOH A 118 418 102 HOH HOH . E 3 HOH A 119 419 105 HOH HOH . E 3 HOH A 120 420 290 HOH HOH . F 3 HOH B 1 301 302 HOH HOH . F 3 HOH B 2 302 24 HOH HOH . F 3 HOH B 3 303 171 HOH HOH . F 3 HOH B 4 304 311 HOH HOH . F 3 HOH B 5 305 310 HOH HOH . F 3 HOH B 6 306 121 HOH HOH . F 3 HOH B 7 307 70 HOH HOH . F 3 HOH B 8 308 75 HOH HOH . F 3 HOH B 9 309 103 HOH HOH . F 3 HOH B 10 310 97 HOH HOH . F 3 HOH B 11 311 170 HOH HOH . F 3 HOH B 12 312 211 HOH HOH . F 3 HOH B 13 313 59 HOH HOH . F 3 HOH B 14 314 12 HOH HOH . F 3 HOH B 15 315 168 HOH HOH . F 3 HOH B 16 316 145 HOH HOH . F 3 HOH B 17 317 38 HOH HOH . F 3 HOH B 18 318 304 HOH HOH . F 3 HOH B 19 319 9 HOH HOH . F 3 HOH B 20 320 3 HOH HOH . F 3 HOH B 21 321 159 HOH HOH . F 3 HOH B 22 322 79 HOH HOH . F 3 HOH B 23 323 277 HOH HOH . F 3 HOH B 24 324 25 HOH HOH . F 3 HOH B 25 325 7 HOH HOH . F 3 HOH B 26 326 2 HOH HOH . F 3 HOH B 27 327 120 HOH HOH . F 3 HOH B 28 328 189 HOH HOH . F 3 HOH B 29 329 114 HOH HOH . F 3 HOH B 30 330 15 HOH HOH . F 3 HOH B 31 331 56 HOH HOH . F 3 HOH B 32 332 174 HOH HOH . F 3 HOH B 33 333 160 HOH HOH . F 3 HOH B 34 334 45 HOH HOH . F 3 HOH B 35 335 36 HOH HOH . F 3 HOH B 36 336 190 HOH HOH . F 3 HOH B 37 337 10 HOH HOH . F 3 HOH B 38 338 164 HOH HOH . F 3 HOH B 39 339 122 HOH HOH . F 3 HOH B 40 340 237 HOH HOH . F 3 HOH B 41 341 41 HOH HOH . F 3 HOH B 42 342 55 HOH HOH . F 3 HOH B 43 343 39 HOH HOH . F 3 HOH B 44 344 266 HOH HOH . F 3 HOH B 45 345 35 HOH HOH . F 3 HOH B 46 346 113 HOH HOH . F 3 HOH B 47 347 186 HOH HOH . F 3 HOH B 48 348 77 HOH HOH . F 3 HOH B 49 349 20 HOH HOH . F 3 HOH B 50 350 233 HOH HOH . F 3 HOH B 51 351 54 HOH HOH . F 3 HOH B 52 352 47 HOH HOH . F 3 HOH B 53 353 57 HOH HOH . F 3 HOH B 54 354 238 HOH HOH . F 3 HOH B 55 355 333 HOH HOH . F 3 HOH B 56 356 325 HOH HOH . F 3 HOH B 57 357 127 HOH HOH . F 3 HOH B 58 358 13 HOH HOH . F 3 HOH B 59 359 80 HOH HOH . F 3 HOH B 60 360 128 HOH HOH . F 3 HOH B 61 361 91 HOH HOH . F 3 HOH B 62 362 263 HOH HOH . F 3 HOH B 63 363 166 HOH HOH . F 3 HOH B 64 364 44 HOH HOH . F 3 HOH B 65 365 297 HOH HOH . F 3 HOH B 66 366 224 HOH HOH . F 3 HOH B 67 367 246 HOH HOH . F 3 HOH B 68 368 173 HOH HOH . F 3 HOH B 69 369 169 HOH HOH . F 3 HOH B 70 370 331 HOH HOH . F 3 HOH B 71 371 309 HOH HOH . F 3 HOH B 72 372 337 HOH HOH . F 3 HOH B 73 373 48 HOH HOH . F 3 HOH B 74 374 289 HOH HOH . F 3 HOH B 75 375 104 HOH HOH . F 3 HOH B 76 376 329 HOH HOH . F 3 HOH B 77 377 137 HOH HOH . F 3 HOH B 78 378 101 HOH HOH . F 3 HOH B 79 379 158 HOH HOH . F 3 HOH B 80 380 124 HOH HOH . F 3 HOH B 81 381 196 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LVB . . . D 2 21.336 42.777 54.073 0.5 33.62 ? C1 LVB 201 B 1 HETATM 2 C C2 LVB . . . D 2 21.241 41.658 54.9 0.5 35.14 ? C2 LVB 201 B 1 HETATM 3 C C3 LVB . . . D 2 21.014 41.818 56.262 0.5 35.15 ? C3 LVB 201 B 1 HETATM 4 C C4 LVB . . . D 2 20.91 43.098 56.784 0.5 34.78 ? C4 LVB 201 B 1 HETATM 5 C C5 LVB . . . D 2 20.995 44.2 55.953 0.5 36.07 ? C5 LVB 201 B 1 HETATM 6 C C6 LVB . . . D 2 21.212 44.054 54.601 0.5 32.17 ? C6 LVB 201 B 1 HETATM 7 O O10 LVB . . . D 2 21.813 46.207 54.259 0.5 31.27 ? O10 LVB 201 B 1 HETATM 8 N N9 LVB . . . D 2 21.297 45.265 53.803 0.5 30.99 ? N9 LVB 201 B 1 HETATM 9 O O11 LVB . . . D 2 20.833 45.345 52.73 0.5 32.71 ? O11 LVB 201 B 1 HETATM 10 O O8 LVB . . . D 2 21.553 42.614 52.701 0.5 38.44 ? O8 LVB 201 B 1 HETATM 11 C C12 LVB . . . D 2 20.663 43.398 58.262 0.5 35.61 ? C12 LVB 201 B 1 HETATM 12 O O13 LVB . . . D 2 19.872 44.235 58.529 0.5 39.7 ? O13 LVB 201 B 1 HETATM 13 C C14 LVB . . . D 2 21.421 42.715 59.406 0.5 33.4 ? C14 LVB 201 B 1 HETATM 14 C C15 LVB . . . D 2 22.347 41.809 59.177 0.5 34.13 ? C15 LVB 201 B 1 HETATM 15 C C16 LVB . . . D 2 23.086 41.145 60.341 0.5 32.44 ? C16 LVB 201 B 1 HETATM 16 C C17 LVB . . . D 2 22.796 41.481 61.577 0.5 33.86 ? C17 LVB 201 B 1 HETATM 17 C C20 LVB . . . D 2 23.534 40.812 62.735 0.5 35.44 ? C20 LVB 201 B 1 HETATM 18 C C18 LVB . . . D 2 21.719 42.533 61.85 0.5 34.26 ? C18 LVB 201 B 1 HETATM 19 C C19 LVB . . . D 2 21.086 43.104 60.845 0.5 34.49 ? C19 LVB 201 B 1 HETATM 20 H H2 LVB . . . D 2 20.933 41.075 56.816 0.5 42.18 ? H2 LVB 201 B 1 HETATM 21 H H3 LVB . . . D 2 20.903 45.053 56.312 0.5 43.28 ? H3 LVB 201 B 1 HETATM 22 H H4 LVB . . . D 2 21.813 41.819 52.548 0.5 46.12 ? H4 LVB 201 B 1 HETATM 23 H H5 LVB . . . D 2 22.554 41.57 58.302 0.5 40.96 ? H5 LVB 201 B 1 HETATM 24 H H6 LVB . . . D 2 23.739 40.504 60.174 0.5 38.93 ? H6 LVB 201 B 1 HETATM 25 H H7 LVB . . . D 2 23.137 41.09 63.575 0.5 42.52 ? H7 LVB 201 B 1 HETATM 26 H H8 LVB . . . D 2 23.467 39.848 62.648 0.5 42.52 ? H8 LVB 201 B 1 HETATM 27 H H9 LVB . . . D 2 24.468 41.074 62.717 0.5 42.52 ? H9 LVB 201 B 1 HETATM 28 H H10 LVB . . . D 2 21.511 42.769 62.725 0.5 41.1 ? H10 LVB 201 B 1 HETATM 29 H H11 LVB . . . D 2 20.434 43.746 61.012 0.5 41.39 ? H11 LVB 201 B 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 460 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 29 #