data_6SWU # _model_server_result.job_id htbHkmsOZIWhzI4dLUpQdA _model_server_result.datetime_utc '2024-11-28 05:12:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6swu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":601}' # _entry.id 6SWU # _exptl.entry_id 6SWU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SWU _cell.length_a 101.732 _cell.length_b 107.532 _cell.length_c 222.65 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SWU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,R,S 1 1 C,D,I,J,K,L,M,N,O,T,U 2 1 E,F,P,Q,V,W 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6SWU _atom_sites.fract_transf_matrix[1][1] 0.00983 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0093 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004491 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 PEG A 1 601 1 PEG PEG . H 2 PEG A 1 602 2 PEG PEG . I 3 EDO C 1 601 1 EDO EDO . J 3 EDO C 1 602 2 EDO EDO . K 3 EDO C 1 603 3 EDO EDO . L 3 EDO C 1 604 7 EDO EDO . M 3 EDO D 1 601 6 EDO EDO . N 3 EDO D 1 602 8 EDO EDO . O 3 EDO D 1 603 9 EDO EDO . P 3 EDO E 1 601 4 EDO EDO . Q 3 EDO F 1 601 5 EDO EDO . R 4 HOH A 1 701 16 HOH HOH . R 4 HOH A 2 702 26 HOH HOH . R 4 HOH A 3 703 17 HOH HOH . R 4 HOH A 4 704 141 HOH HOH . R 4 HOH A 5 705 104 HOH HOH . R 4 HOH A 6 706 143 HOH HOH . R 4 HOH A 7 707 12 HOH HOH . R 4 HOH A 8 708 10 HOH HOH . R 4 HOH A 9 709 22 HOH HOH . R 4 HOH A 10 710 107 HOH HOH . R 4 HOH A 11 711 101 HOH HOH . R 4 HOH A 12 712 2 HOH HOH . R 4 HOH A 13 713 132 HOH HOH . R 4 HOH A 14 714 106 HOH HOH . R 4 HOH A 15 715 14 HOH HOH . R 4 HOH A 16 716 122 HOH HOH . R 4 HOH A 17 717 52 HOH HOH . R 4 HOH A 18 718 4 HOH HOH . R 4 HOH A 19 719 9 HOH HOH . R 4 HOH A 20 720 35 HOH HOH . R 4 HOH A 21 721 102 HOH HOH . R 4 HOH A 22 722 3 HOH HOH . R 4 HOH A 23 723 11 HOH HOH . R 4 HOH A 24 724 103 HOH HOH . R 4 HOH A 25 725 28 HOH HOH . R 4 HOH A 26 726 41 HOH HOH . S 4 HOH B 1 601 126 HOH HOH . S 4 HOH B 2 602 144 HOH HOH . S 4 HOH B 3 603 49 HOH HOH . S 4 HOH B 4 604 39 HOH HOH . S 4 HOH B 5 605 136 HOH HOH . S 4 HOH B 6 606 46 HOH HOH . S 4 HOH B 7 607 121 HOH HOH . S 4 HOH B 8 608 123 HOH HOH . S 4 HOH B 9 609 110 HOH HOH . S 4 HOH B 10 610 108 HOH HOH . S 4 HOH B 11 611 67 HOH HOH . S 4 HOH B 12 612 44 HOH HOH . S 4 HOH B 13 613 105 HOH HOH . S 4 HOH B 14 614 54 HOH HOH . S 4 HOH B 15 615 56 HOH HOH . S 4 HOH B 16 616 45 HOH HOH . S 4 HOH B 17 617 138 HOH HOH . S 4 HOH B 18 618 137 HOH HOH . S 4 HOH B 19 619 109 HOH HOH . T 4 HOH C 1 701 85 HOH HOH . T 4 HOH C 2 702 30 HOH HOH . T 4 HOH C 3 703 140 HOH HOH . T 4 HOH C 4 704 19 HOH HOH . T 4 HOH C 5 705 58 HOH HOH . T 4 HOH C 6 706 40 HOH HOH . T 4 HOH C 7 707 120 HOH HOH . T 4 HOH C 8 708 63 HOH HOH . T 4 HOH C 9 709 5 HOH HOH . T 4 HOH C 10 710 60 HOH HOH . T 4 HOH C 11 711 47 HOH HOH . T 4 HOH C 12 712 111 HOH HOH . T 4 HOH C 13 713 57 HOH HOH . T 4 HOH C 14 714 68 HOH HOH . T 4 HOH C 15 715 73 HOH HOH . T 4 HOH C 16 716 18 HOH HOH . T 4 HOH C 17 717 62 HOH HOH . T 4 HOH C 18 718 112 HOH HOH . U 4 HOH D 1 701 81 HOH HOH . U 4 HOH D 2 702 59 HOH HOH . U 4 HOH D 3 703 78 HOH HOH . U 4 HOH D 4 704 135 HOH HOH . U 4 HOH D 5 705 115 HOH HOH . U 4 HOH D 6 706 76 HOH HOH . U 4 HOH D 7 707 114 HOH HOH . U 4 HOH D 8 708 83 HOH HOH . U 4 HOH D 9 709 82 HOH HOH . U 4 HOH D 10 710 113 HOH HOH . U 4 HOH D 11 711 77 HOH HOH . U 4 HOH D 12 712 119 HOH HOH . U 4 HOH D 13 713 139 HOH HOH . V 4 HOH E 1 701 79 HOH HOH . V 4 HOH E 2 702 92 HOH HOH . V 4 HOH E 3 703 90 HOH HOH . W 4 HOH F 1 701 125 HOH HOH . W 4 HOH F 2 702 98 HOH HOH . W 4 HOH F 3 703 8 HOH HOH . W 4 HOH F 4 704 142 HOH HOH . W 4 HOH F 5 705 118 HOH HOH . W 4 HOH F 6 706 100 HOH HOH . W 4 HOH F 7 707 94 HOH HOH . W 4 HOH F 8 708 55 HOH HOH . W 4 HOH F 9 709 50 HOH HOH . W 4 HOH F 10 710 134 HOH HOH . W 4 HOH F 11 711 99 HOH HOH . W 4 HOH F 12 712 117 HOH HOH . W 4 HOH F 13 713 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . M 3 -31.09 68.979 15.682 1 107.51 ? C1 EDO 601 D 1 HETATM 2 O O1 EDO . . . M 3 -30.685 68.355 14.475 1 104.71 ? O1 EDO 601 D 1 HETATM 3 C C2 EDO . . . M 3 -32.424 69.635 15.602 1 108.31 ? C2 EDO 601 D 1 HETATM 4 O O2 EDO . . . M 3 -32.855 70.186 16.836 1 105.84 ? O2 EDO 601 D 1 HETATM 5 H H11 EDO . . . M 3 -30.423 69.654 15.927 1 106.98 ? H11 EDO 601 D 1 HETATM 6 H H12 EDO . . . M 3 -31.112 68.307 16.393 1 106.78 ? H12 EDO 601 D 1 HETATM 7 H HO1 EDO . . . M 3 -29.999 67.894 14.496 0 110.84 ? HO1 EDO 601 D 1 HETATM 8 H H21 EDO . . . M 3 -33.083 68.975 15.302 1 107.53 ? H21 EDO 601 D 1 HETATM 9 H H22 EDO . . . M 3 -32.385 70.35 14.932 1 107.53 ? H22 EDO 601 D 1 HETATM 10 H HO2 EDO . . . M 3 -32.257 70.705 17.136 1 106.59 ? HO2 EDO 601 D 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #