data_6SX5
#
_model_server_result.job_id            FcVG4LZUCWYoi25PPmiXwA 
_model_server_result.datetime_utc      '2024-10-12 09:22:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sx5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    6SX5 
#
_exptl.entry_id    6SX5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6SX5 
_cell.length_a            109.133 
_cell.length_b            109.133 
_cell.length_c            209.031 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SX5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 109.133 109.133 0 
3 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 109.133 0 0 
4 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 109.133 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6SX5 
_atom_sites.fract_transf_matrix[1][1]    0.009163 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009163 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004784 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 301 301 NA NA . 
C 2 NA A 1 302 302 NA NA . 
D 2 NA A 1 303 303 NA NA . 
E 3 2CV A 1 304 601 2CV 2CV . 
F 4 12P A 1 305 701 12P 12P . 
G 3 2CV A 1 306 901 2CV 2CV . 
H 4 12P A 1 307 1001 12P 12P . 
I 3 2CV A 1 308 1101 2CV 2CV . 
J 4 12P A 1 309 1201 12P 12P . 
K 4 12P A 1 310 1301 12P 12P . 
L 5 HOH A 1 401 2 HOH HOH . 
L 5 HOH A 2 402 31 HOH HOH . 
L 5 HOH A 3 403 52 HOH HOH . 
L 5 HOH A 4 404 8 HOH HOH . 
L 5 HOH A 5 405 6 HOH HOH . 
L 5 HOH A 6 406 12 HOH HOH . 
L 5 HOH A 7 407 7 HOH HOH . 
L 5 HOH A 8 408 3 HOH HOH . 
L 5 HOH A 9 409 9 HOH HOH . 
L 5 HOH A 10 410 73 HOH HOH . 
L 5 HOH A 11 411 15 HOH HOH . 
L 5 HOH A 12 412 58 HOH HOH . 
L 5 HOH A 13 413 32 HOH HOH . 
L 5 HOH A 14 414 4 HOH HOH . 
L 5 HOH A 15 415 60 HOH HOH . 
L 5 HOH A 16 416 21 HOH HOH . 
L 5 HOH A 17 417 1 HOH HOH . 
L 5 HOH A 18 418 11 HOH HOH . 
L 5 HOH A 19 419 48 HOH HOH . 
L 5 HOH A 20 420 5 HOH HOH . 
L 5 HOH A 21 421 23 HOH HOH . 
L 5 HOH A 22 422 85 HOH HOH . 
L 5 HOH A 23 423 1 HOH HOH . 
L 5 HOH A 24 424 45 HOH HOH . 
L 5 HOH A 25 425 5 HOH HOH . 
L 5 HOH A 26 426 51 HOH HOH . 
L 5 HOH A 27 427 3 HOH HOH . 
L 5 HOH A 28 428 18 HOH HOH . 
L 5 HOH A 29 429 6 HOH HOH . 
L 5 HOH A 30 430 31 HOH HOH . 
L 5 HOH A 31 431 42 HOH HOH . 
L 5 HOH A 32 432 14 HOH HOH . 
L 5 HOH A 33 433 13 HOH HOH . 
L 5 HOH A 34 434 30 HOH HOH . 
L 5 HOH A 35 435 34 HOH HOH . 
L 5 HOH A 36 436 25 HOH HOH . 
L 5 HOH A 37 437 49 HOH HOH . 
L 5 HOH A 38 438 18 HOH HOH . 
L 5 HOH A 39 439 63 HOH HOH . 
L 5 HOH A 40 440 27 HOH HOH . 
L 5 HOH A 41 441 66 HOH HOH . 
L 5 HOH A 42 442 62 HOH HOH . 
L 5 HOH A 43 443 67 HOH HOH . 
L 5 HOH A 44 444 2 HOH HOH . 
L 5 HOH A 45 445 41 HOH HOH . 
L 5 HOH A 46 446 8 HOH HOH . 
L 5 HOH A 47 447 16 HOH HOH . 
L 5 HOH A 48 448 22 HOH HOH . 
L 5 HOH A 49 449 26 HOH HOH . 
L 5 HOH A 50 450 10 HOH HOH . 
L 5 HOH A 51 451 71 HOH HOH . 
L 5 HOH A 52 452 79 HOH HOH . 
L 5 HOH A 53 453 54 HOH HOH . 
L 5 HOH A 54 454 35 HOH HOH . 
L 5 HOH A 55 455 75 HOH HOH . 
L 5 HOH A 56 456 59 HOH HOH . 
L 5 HOH A 57 457 61 HOH HOH . 
L 5 HOH A 58 458 83 HOH HOH . 
L 5 HOH A 59 459 28 HOH HOH . 
L 5 HOH A 60 460 56 HOH HOH . 
L 5 HOH A 61 461 19 HOH HOH . 
L 5 HOH A 62 462 14 HOH HOH . 
L 5 HOH A 63 463 12 HOH HOH . 
L 5 HOH A 64 464 57 HOH HOH . 
L 5 HOH A 65 465 47 HOH HOH . 
L 5 HOH A 66 466 21 HOH HOH . 
L 5 HOH A 67 467 30 HOH HOH . 
L 5 HOH A 68 468 56 HOH HOH . 
L 5 HOH A 69 469 28 HOH HOH . 
L 5 HOH A 70 470 27 HOH HOH . 
L 5 HOH A 71 471 17 HOH HOH . 
L 5 HOH A 72 472 10 HOH HOH . 
L 5 HOH A 73 473 16 HOH HOH . 
L 5 HOH A 74 474 13 HOH HOH . 
L 5 HOH A 75 475 60 HOH HOH . 
L 5 HOH A 76 476 29 HOH HOH . 
L 5 HOH A 77 477 78 HOH HOH . 
L 5 HOH A 78 478 20 HOH HOH . 
L 5 HOH A 79 479 36 HOH HOH . 
L 5 HOH A 80 480 81 HOH HOH . 
L 5 HOH A 81 481 32 HOH HOH . 
L 5 HOH A 82 482 80 HOH HOH . 
L 5 HOH A 83 483 9 HOH HOH . 
L 5 HOH A 84 484 59 HOH HOH . 
L 5 HOH A 85 485 58 HOH HOH . 
L 5 HOH A 86 486 50 HOH HOH . 
L 5 HOH A 87 487 55 HOH HOH . 
L 5 HOH A 88 488 70 HOH HOH . 
L 5 HOH A 89 489 84 HOH HOH . 
L 5 HOH A 90 490 82 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               54.566 
_atom_site.Cartn_y               54.566 
_atom_site.Cartn_z               19.424 
_atom_site.occupancy             0.25 
_atom_site.B_iso_or_equiv        75.33 
_atom_site.pdbx_formal_charge    1 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           1 
#