data_6SXC # _model_server_result.job_id YhBVtc0AAYsOQpVDicDcWA _model_server_result.datetime_utc '2024-11-26 04:24:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sxc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 6SXC # _exptl.entry_id 6SXC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 546.646 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6SXC _cell.length_a 109.125 _cell.length_b 109.125 _cell.length_c 210.596 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SXC _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H50 O13' _chem_comp.formula_weight 546.646 _chem_comp.id 12P _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O37 C36 12P sing 1 n n O37 H37 12P sing 2 n n C36 C35 12P sing 3 n n C36 H361 12P sing 4 n n C36 H362 12P sing 5 n n C35 O34 12P sing 6 n n C35 H351 12P sing 7 n n C35 H352 12P sing 8 n n O34 C33 12P sing 9 n n C33 C32 12P sing 10 n n C33 H331 12P sing 11 n n C33 H332 12P sing 12 n n C32 O31 12P sing 13 n n C32 H321 12P sing 14 n n C32 H322 12P sing 15 n n O31 C30 12P sing 16 n n C30 C29 12P sing 17 n n C30 H301 12P sing 18 n n C30 H302 12P sing 19 n n C29 O28 12P sing 20 n n C29 H291 12P sing 21 n n C29 H292 12P sing 22 n n O28 C27 12P sing 23 n n C27 C26 12P sing 24 n n C27 H271 12P sing 25 n n C27 H272 12P sing 26 n n C26 O25 12P sing 27 n n C26 H261 12P sing 28 n n C26 H262 12P sing 29 n n O25 C24 12P sing 30 n n C24 C23 12P sing 31 n n C24 H241 12P sing 32 n n C24 H242 12P sing 33 n n C23 O22 12P sing 34 n n C23 H231 12P sing 35 n n C23 H232 12P sing 36 n n O22 C21 12P sing 37 n n C21 C20 12P sing 38 n n C21 H211 12P sing 39 n n C21 H212 12P sing 40 n n C20 O19 12P sing 41 n n C20 H201 12P sing 42 n n C20 H202 12P sing 43 n n O19 C18 12P sing 44 n n C18 C17 12P sing 45 n n C18 H181 12P sing 46 n n C18 H182 12P sing 47 n n C17 O16 12P sing 48 n n C17 H171 12P sing 49 n n C17 H172 12P sing 50 n n O16 C15 12P sing 51 n n C15 C14 12P sing 52 n n C15 H151 12P sing 53 n n C15 H152 12P sing 54 n n C14 O13 12P sing 55 n n C14 H141 12P sing 56 n n C14 H142 12P sing 57 n n O13 C12 12P sing 58 n n C12 C11 12P sing 59 n n C12 H121 12P sing 60 n n C12 H122 12P sing 61 n n C11 O10 12P sing 62 n n C11 H111 12P sing 63 n n C11 H112 12P sing 64 n n O10 C9 12P sing 65 n n C9 C8 12P sing 66 n n C9 H91 12P sing 67 n n C9 H92 12P sing 68 n n C8 O7 12P sing 69 n n C8 H81 12P sing 70 n n C8 H82 12P sing 71 n n O7 C6 12P sing 72 n n C6 C5 12P sing 73 n n C6 H61 12P sing 74 n n C6 H62 12P sing 75 n n C5 O4 12P sing 76 n n C5 H51 12P sing 77 n n C5 H52 12P sing 78 n n O4 C3 12P sing 79 n n C3 C2 12P sing 80 n n C3 H31 12P sing 81 n n C3 H32 12P sing 82 n n C2 O1 12P sing 83 n n C2 H21 12P sing 84 n n C2 H22 12P sing 85 n n O1 HO1 12P sing 86 n n # _atom_sites.entry_id 6SXC _atom_sites.fract_transf_matrix[1][1] 0.009164 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004748 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 301 301 NA NA . C 2 NA A 1 302 302 NA NA . D 2 NA A 1 303 303 NA NA . E 3 2CV A 1 304 501 2CV 2CV . F 4 OHT A 1 305 801 OHT OHT . G 5 12P A 1 306 1001 12P 12P . H 4 OHT A 1 307 1101 OHT OHT . I 3 2CV A 1 308 1201 2CV 2CV . J 3 2CV A 1 309 1301 2CV 2CV . K 6 HOH A 1 401 45 HOH HOH . K 6 HOH A 2 402 1 HOH HOH . K 6 HOH A 3 403 47 HOH HOH . K 6 HOH A 4 404 3 HOH HOH . K 6 HOH A 5 405 4 HOH HOH . K 6 HOH A 6 406 46 HOH HOH . K 6 HOH A 7 407 51 HOH HOH . K 6 HOH A 8 408 14 HOH HOH . K 6 HOH A 9 409 18 HOH HOH . K 6 HOH A 10 410 59 HOH HOH . K 6 HOH A 11 411 7 HOH HOH . K 6 HOH A 12 412 9 HOH HOH . K 6 HOH A 13 413 48 HOH HOH . K 6 HOH A 14 414 60 HOH HOH . K 6 HOH A 15 415 68 HOH HOH . K 6 HOH A 16 416 36 HOH HOH . K 6 HOH A 17 417 30 HOH HOH . K 6 HOH A 18 418 15 HOH HOH . K 6 HOH A 19 419 33 HOH HOH . K 6 HOH A 20 420 27 HOH HOH . K 6 HOH A 21 421 5 HOH HOH . K 6 HOH A 22 422 65 HOH HOH . K 6 HOH A 23 423 37 HOH HOH . K 6 HOH A 24 424 10 HOH HOH . K 6 HOH A 25 425 12 HOH HOH . K 6 HOH A 26 426 64 HOH HOH . K 6 HOH A 27 427 6 HOH HOH . K 6 HOH A 28 428 32 HOH HOH . K 6 HOH A 29 429 41 HOH HOH . K 6 HOH A 30 430 58 HOH HOH . K 6 HOH A 31 431 21 HOH HOH . K 6 HOH A 32 432 52 HOH HOH . K 6 HOH A 33 433 54 HOH HOH . K 6 HOH A 34 434 50 HOH HOH . K 6 HOH A 35 435 11 HOH HOH . K 6 HOH A 36 436 67 HOH HOH . K 6 HOH A 37 437 28 HOH HOH . K 6 HOH A 38 438 35 HOH HOH . K 6 HOH A 39 439 66 HOH HOH . K 6 HOH A 40 440 24 HOH HOH . K 6 HOH A 41 441 16 HOH HOH . K 6 HOH A 42 442 44 HOH HOH . K 6 HOH A 43 443 49 HOH HOH . K 6 HOH A 44 444 19 HOH HOH . K 6 HOH A 45 445 22 HOH HOH . K 6 HOH A 46 446 62 HOH HOH . K 6 HOH A 47 447 63 HOH HOH . K 6 HOH A 48 448 29 HOH HOH . K 6 HOH A 49 449 55 HOH HOH . K 6 HOH A 50 450 17 HOH HOH . K 6 HOH A 51 451 39 HOH HOH . K 6 HOH A 52 452 13 HOH HOH . K 6 HOH A 53 453 61 HOH HOH . K 6 HOH A 54 454 53 HOH HOH . K 6 HOH A 55 455 31 HOH HOH . K 6 HOH A 56 456 23 HOH HOH . K 6 HOH A 57 457 26 HOH HOH . K 6 HOH A 58 458 56 HOH HOH . K 6 HOH A 59 459 25 HOH HOH . K 6 HOH A 60 460 8 HOH HOH . K 6 HOH A 61 461 57 HOH HOH . K 6 HOH A 62 462 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O37 12P . . . G 5 8.525 -17.624 31.288 1 114.24 ? O37 12P 306 A 1 HETATM 2 C C36 12P . . . G 5 9.557 -18.293 30.578 1 113.8 ? C36 12P 306 A 1 HETATM 3 C C35 12P . . . G 5 9.052 -18.933 29.322 1 114.05 ? C35 12P 306 A 1 HETATM 4 O O34 12P . . . G 5 10.116 -19.612 28.665 1 114.23 ? O34 12P 306 A 1 HETATM 5 C C33 12P . . . G 5 9.896 -19.816 27.271 1 112.36 ? C33 12P 306 A 1 HETATM 6 C C32 12P . . . G 5 11.033 -19.239 26.482 1 109.81 ? C32 12P 306 A 1 HETATM 7 O O31 12P . . . G 5 10.89 -19.54 25.103 1 107.46 ? O31 12P 306 A 1 HETATM 8 C C30 12P . . . G 5 11.409 -18.529 24.246 1 105.87 ? C30 12P 306 A 1 HETATM 9 C C29 12P . . . G 5 11.199 -18.942 22.819 1 104.27 ? C29 12P 306 A 1 HETATM 10 O O28 12P . . . G 5 10.911 -17.836 21.958 1 101.4 ? O28 12P 306 A 1 HETATM 11 C C27 12P . . . G 5 9.516 -17.621 21.712 1 99.24 ? C27 12P 306 A 1 HETATM 12 C C26 12P . . . G 5 9.011 -18.388 20.52 1 98.08 ? C26 12P 306 A 1 HETATM 13 O O25 12P . . . G 5 8.603 -19.689 20.927 1 98.38 ? O25 12P 306 A 1 HETATM 14 C C24 12P . . . G 5 7.824 -20.385 19.965 1 97.23 ? C24 12P 306 A 1 HETATM 15 C C23 12P . . . G 5 8.201 -21.836 19.968 1 96.29 ? C23 12P 306 A 1 HETATM 16 O O22 12P . . . G 5 7.426 -22.58 19.032 1 95.78 ? O22 12P 306 A 1 HETATM 17 C C21 12P . . . G 5 8.151 -22.969 17.869 1 94.38 ? C21 12P 306 A 1 HETATM 18 C C20 12P . . . G 5 7.227 -23.546 16.849 1 93.92 ? C20 12P 306 A 1 HETATM 19 O O19 12P . . . G 5 7.844 -23.587 15.567 1 94.17 ? O19 12P 306 A 1 HETATM 20 C C18 12P . . . G 5 7.126 -22.848 14.577 1 94.28 ? C18 12P 306 A 1 HETATM 21 C C17 12P . . . G 5 6.832 -23.686 13.37 1 93.52 ? C17 12P 306 A 1 HETATM 22 O O16 12P . . . G 5 6.254 -22.881 12.337 1 93.05 ? O16 12P 306 A 1 HETATM 23 C C15 12P . . . G 5 6.857 -23.09 11.058 1 87.37 ? C15 12P 306 A 1 HETATM 24 C C14 12P . . . G 5 5.969 -22.657 9.926 1 81.72 ? C14 12P 306 A 1 HETATM 25 O O13 12P . . . G 5 4.947 -23.605 9.574 1 74.35 ? O13 12P 306 A 1 HETATM 26 C C12 12P . . . G 5 5.121 -24.234 8.307 1 63.98 ? C12 12P 306 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 26 #