data_6SXF
#
_model_server_result.job_id            6s40cRasAfbWaDZxoRsdtA 
_model_server_result.datetime_utc      '2024-10-12 05:24:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sxf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":304}' 
#
_entry.id    6SXF 
#
_exptl.entry_id    6SXF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              379.489 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            HEGA-10 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6SXF 
_cell.length_a            107.956 
_cell.length_b            107.956 
_cell.length_c            212.224 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SXF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        90 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 4 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,R 1 1,2,3,4 
B,J,K,L,M,N,O,P,Q,S 2 1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 107.956 0 
3 'crystal symmetry operation' 3_555 -y+1/2,x+1/2,z 0 -1 0 1 0 0 0 0 1 53.978 53.978 0 
4 'crystal symmetry operation' 4_455 y-1/2,-x+1/2,z 0 1 0 -1 0 0 0 0 1 -53.978 53.978 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 M N N 
? 3 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 E NA NA . A NA 303 1_555 R O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? 
metalc ? metalc2 E NA NA . A NA 303 1_555 R O HOH . A HOH 407 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? 
#
_chem_comp.formula           'C18 H37 N O7' 
_chem_comp.formula_weight    379.489 
_chem_comp.id                2CV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              HEGA-10 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C9 C12 2CV sing 87 n n 
C9 C1 2CV sing 88 n n 
C12 C15 2CV sing 89 n n 
C15 C18 2CV sing 90 n n 
C18 C21 2CV sing 91 n n 
C21 C24 2CV sing 92 n n 
C24 C27 2CV sing 93 n n 
C27 C30 2CV sing 94 n n 
C30 N33 2CV sing 95 n n 
C30 O34 2CV doub 96 n n 
N33 C35 2CV sing 97 n n 
N33 C36 2CV sing 98 n n 
C35 C60 2CV sing 99 n n 
C36 C37 2CV sing 100 n n 
C37 C40 2CV sing 101 n n 
C37 O47 2CV sing 102 n n 
C40 C41 2CV sing 103 n n 
C40 O49 2CV sing 104 n n 
C41 C42 2CV sing 105 n n 
C41 O51 2CV sing 106 n n 
C42 C43 2CV sing 107 n n 
C42 O53 2CV sing 108 n n 
C43 O44 2CV sing 109 n n 
C60 O63 2CV sing 110 n n 
C1 C0 2CV sing 111 n n 
C9 H91C 2CV sing 112 n n 
C9 H92C 2CV sing 113 n n 
C12 H121 2CV sing 114 n n 
C12 H122 2CV sing 115 n n 
C1 H11C 2CV sing 116 n n 
C1 H12C 2CV sing 117 n n 
C15 H151 2CV sing 118 n n 
C15 H152 2CV sing 119 n n 
C18 H181 2CV sing 120 n n 
C18 H182 2CV sing 121 n n 
C21 H211 2CV sing 122 n n 
C21 H212 2CV sing 123 n n 
C24 H241 2CV sing 124 n n 
C24 H242 2CV sing 125 n n 
C27 H271 2CV sing 126 n n 
C27 H272 2CV sing 127 n n 
C35 H351 2CV sing 128 n n 
C35 H352 2CV sing 129 n n 
C36 H361 2CV sing 130 n n 
C36 H362 2CV sing 131 n n 
C60 H601 2CV sing 132 n n 
C60 H602 2CV sing 133 n n 
C37 H37 2CV sing 134 n n 
C40 H40 2CV sing 135 n n 
O47 H47 2CV sing 136 n n 
C41 H41 2CV sing 137 n n 
O49 H49 2CV sing 138 n n 
C42 H42 2CV sing 139 n n 
O51 H51 2CV sing 140 n n 
C43 H431 2CV sing 141 n n 
C43 H432 2CV sing 142 n n 
O53 H53 2CV sing 143 n n 
O44 H44 2CV sing 144 n n 
O63 H63 2CV sing 145 n n 
C0 H01C 2CV sing 146 n n 
C0 H02C 2CV sing 147 n n 
C0 H03C 2CV sing 148 n n 
#
_atom_sites.entry_id                     6SXF 
_atom_sites.fract_transf_matrix[1][1]    0.009263 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009263 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004712 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NA A 1 301 301 NA NA . 
D 2 NA A 1 302 302 NA NA . 
E 2 NA A 1 303 303 NA NA . 
F 3 2CV A 1 304 501 2CV 2CV . 
G 4 12P A 1 305 1001 12P 12P . 
H 3 2CV A 1 306 1201 2CV 2CV . 
I 5 CTX A 1 307 1301 CTX CTX . 
J 2 NA B 1 301 301 NA NA . 
K 2 NA B 1 302 302 NA NA . 
L 2 NA B 1 303 303 NA NA . 
M 3 2CV B 1 304 501 2CV 2CV . 
N 4 12P B 1 305 1001 12P 12P . 
O 3 2CV B 1 306 1201 2CV 2CV . 
P 5 CTX B 1 307 1401 CTX CTX . 
Q 5 CTX B 1 308 1501 CTX CTX . 
R 6 HOH A 1 401 111 HOH HOH . 
R 6 HOH A 2 402 45 HOH HOH . 
R 6 HOH A 3 403 115 HOH HOH . 
R 6 HOH A 4 404 46 HOH HOH . 
R 6 HOH A 5 405 136 HOH HOH . 
R 6 HOH A 6 406 88 HOH HOH . 
R 6 HOH A 7 407 16 HOH HOH . 
R 6 HOH A 8 408 14 HOH HOH . 
R 6 HOH A 9 409 123 HOH HOH . 
R 6 HOH A 10 410 5 HOH HOH . 
R 6 HOH A 11 411 51 HOH HOH . 
R 6 HOH A 12 412 8 HOH HOH . 
R 6 HOH A 13 413 63 HOH HOH . 
R 6 HOH A 14 414 12 HOH HOH . 
R 6 HOH A 15 415 67 HOH HOH . 
R 6 HOH A 16 416 44 HOH HOH . 
R 6 HOH A 17 417 116 HOH HOH . 
R 6 HOH A 18 418 4 HOH HOH . 
R 6 HOH A 19 419 94 HOH HOH . 
R 6 HOH A 20 420 113 HOH HOH . 
R 6 HOH A 21 421 118 HOH HOH . 
R 6 HOH A 22 422 103 HOH HOH . 
R 6 HOH A 23 423 87 HOH HOH . 
R 6 HOH A 24 424 32 HOH HOH . 
R 6 HOH A 25 425 13 HOH HOH . 
R 6 HOH A 26 426 74 HOH HOH . 
R 6 HOH A 27 427 77 HOH HOH . 
R 6 HOH A 28 428 129 HOH HOH . 
R 6 HOH A 29 429 131 HOH HOH . 
R 6 HOH A 30 430 68 HOH HOH . 
R 6 HOH A 31 431 30 HOH HOH . 
R 6 HOH A 32 432 7 HOH HOH . 
R 6 HOH A 33 433 114 HOH HOH . 
R 6 HOH A 34 434 120 HOH HOH . 
R 6 HOH A 35 435 117 HOH HOH . 
R 6 HOH A 36 436 22 HOH HOH . 
R 6 HOH A 37 437 28 HOH HOH . 
R 6 HOH A 38 438 79 HOH HOH . 
R 6 HOH A 39 439 71 HOH HOH . 
R 6 HOH A 40 440 132 HOH HOH . 
R 6 HOH A 41 441 104 HOH HOH . 
R 6 HOH A 42 442 20 HOH HOH . 
R 6 HOH A 43 443 38 HOH HOH . 
R 6 HOH A 44 444 35 HOH HOH . 
R 6 HOH A 45 445 78 HOH HOH . 
R 6 HOH A 46 446 121 HOH HOH . 
R 6 HOH A 47 447 100 HOH HOH . 
R 6 HOH A 48 448 60 HOH HOH . 
R 6 HOH A 49 449 95 HOH HOH . 
R 6 HOH A 50 450 76 HOH HOH . 
R 6 HOH A 51 451 18 HOH HOH . 
R 6 HOH A 52 452 90 HOH HOH . 
R 6 HOH A 53 453 69 HOH HOH . 
R 6 HOH A 54 454 97 HOH HOH . 
R 6 HOH A 55 455 80 HOH HOH . 
R 6 HOH A 56 456 73 HOH HOH . 
R 6 HOH A 57 457 11 HOH HOH . 
R 6 HOH A 58 458 42 HOH HOH . 
R 6 HOH A 59 459 62 HOH HOH . 
R 6 HOH A 60 460 75 HOH HOH . 
R 6 HOH A 61 461 84 HOH HOH . 
R 6 HOH A 62 462 70 HOH HOH . 
R 6 HOH A 63 463 9 HOH HOH . 
R 6 HOH A 64 464 81 HOH HOH . 
S 6 HOH B 1 401 99 HOH HOH . 
S 6 HOH B 2 402 72 HOH HOH . 
S 6 HOH B 3 403 19 HOH HOH . 
S 6 HOH B 4 404 59 HOH HOH . 
S 6 HOH B 5 405 1 HOH HOH . 
S 6 HOH B 6 406 47 HOH HOH . 
S 6 HOH B 7 407 2 HOH HOH . 
S 6 HOH B 8 408 134 HOH HOH . 
S 6 HOH B 9 409 55 HOH HOH . 
S 6 HOH B 10 410 93 HOH HOH . 
S 6 HOH B 11 411 48 HOH HOH . 
S 6 HOH B 12 412 124 HOH HOH . 
S 6 HOH B 13 413 27 HOH HOH . 
S 6 HOH B 14 414 119 HOH HOH . 
S 6 HOH B 15 415 56 HOH HOH . 
S 6 HOH B 16 416 92 HOH HOH . 
S 6 HOH B 17 417 6 HOH HOH . 
S 6 HOH B 18 418 105 HOH HOH . 
S 6 HOH B 19 419 17 HOH HOH . 
S 6 HOH B 20 420 101 HOH HOH . 
S 6 HOH B 21 421 3 HOH HOH . 
S 6 HOH B 22 422 10 HOH HOH . 
S 6 HOH B 23 423 128 HOH HOH . 
S 6 HOH B 24 424 31 HOH HOH . 
S 6 HOH B 25 425 65 HOH HOH . 
S 6 HOH B 26 426 15 HOH HOH . 
S 6 HOH B 27 427 108 HOH HOH . 
S 6 HOH B 28 428 24 HOH HOH . 
S 6 HOH B 29 429 107 HOH HOH . 
S 6 HOH B 30 430 57 HOH HOH . 
S 6 HOH B 31 431 66 HOH HOH . 
S 6 HOH B 32 432 125 HOH HOH . 
S 6 HOH B 33 433 34 HOH HOH . 
S 6 HOH B 34 434 85 HOH HOH . 
S 6 HOH B 35 435 102 HOH HOH . 
S 6 HOH B 36 436 112 HOH HOH . 
S 6 HOH B 37 437 98 HOH HOH . 
S 6 HOH B 38 438 133 HOH HOH . 
S 6 HOH B 39 439 37 HOH HOH . 
S 6 HOH B 40 440 126 HOH HOH . 
S 6 HOH B 41 441 61 HOH HOH . 
S 6 HOH B 42 442 52 HOH HOH . 
S 6 HOH B 43 443 127 HOH HOH . 
S 6 HOH B 44 444 135 HOH HOH . 
S 6 HOH B 45 445 36 HOH HOH . 
S 6 HOH B 46 446 39 HOH HOH . 
S 6 HOH B 47 447 86 HOH HOH . 
S 6 HOH B 48 448 96 HOH HOH . 
S 6 HOH B 49 449 83 HOH HOH . 
S 6 HOH B 50 450 50 HOH HOH . 
S 6 HOH B 51 451 29 HOH HOH . 
S 6 HOH B 52 452 25 HOH HOH . 
S 6 HOH B 53 453 58 HOH HOH . 
S 6 HOH B 54 454 64 HOH HOH . 
S 6 HOH B 55 455 106 HOH HOH . 
S 6 HOH B 56 456 54 HOH HOH . 
S 6 HOH B 57 457 41 HOH HOH . 
S 6 HOH B 58 458 26 HOH HOH . 
S 6 HOH B 59 459 82 HOH HOH . 
S 6 HOH B 60 460 130 HOH HOH . 
S 6 HOH B 61 461 109 HOH HOH . 
S 6 HOH B 62 462 40 HOH HOH . 
S 6 HOH B 63 463 122 HOH HOH . 
S 6 HOH B 64 464 43 HOH HOH . 
S 6 HOH B 65 465 33 HOH HOH . 
S 6 HOH B 66 466 49 HOH HOH . 
S 6 HOH B 67 467 23 HOH HOH . 
S 6 HOH B 68 468 21 HOH HOH . 
S 6 HOH B 69 469 89 HOH HOH . 
S 6 HOH B 70 470 53 HOH HOH . 
S 6 HOH B 71 471 91 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C9 2CV . . . F 3 -16.997 61.308 72.635 1 66.04 ? C9 2CV 304 A 1 
HETATM 2 C C12 2CV . . . F 3 -16.912 61.16 71.133 1 66.96 ? C12 2CV 304 A 1 
HETATM 3 C C15 2CV . . . F 3 -18.255 61.2 70.436 1 68.19 ? C15 2CV 304 A 1 
HETATM 4 C C18 2CV . . . F 3 -18.204 60.828 68.985 1 69.88 ? C18 2CV 304 A 1 
HETATM 5 C C21 2CV . . . F 3 -19.433 61.221 68.197 1 72.06 ? C21 2CV 304 A 1 
HETATM 6 C C24 2CV . . . F 3 -19.35 60.739 66.787 1 74.86 ? C24 2CV 304 A 1 
HETATM 7 C C27 2CV . . . F 3 -20.555 61.038 65.91 1 77.9 ? C27 2CV 304 A 1 
HETATM 8 C C30 2CV . . . F 3 -20.181 60.992 64.446 1 81.08 ? C30 2CV 304 A 1 
HETATM 9 N N33 2CV . . . F 3 -20.98 60.33 63.576 1 83.63 ? N33 2CV 304 A 1 
HETATM 10 O O34 2CV . . . F 3 -19.144 61.516 64.085 1 81.27 ? O34 2CV 304 A 1 
HETATM 11 C C35 2CV . . . F 3 -22.212 59.643 63.995 1 83.38 ? C35 2CV 304 A 1 
HETATM 12 C C36 2CV . . . F 3 -20.643 60.276 62.141 1 85.71 ? C36 2CV 304 A 1 
HETATM 13 C C37 2CV . . . F 3 -19.632 59.194 61.742 1 87.28 ? C37 2CV 304 A 1 
HETATM 14 C C40 2CV . . . F 3 -18.291 59.567 61.083 1 87.51 ? C40 2CV 304 A 1 
HETATM 15 C C41 2CV . . . F 3 -17.592 60.785 61.705 1 86.79 ? C41 2CV 304 A 1 
HETATM 16 C C42 2CV . . . F 3 -16.217 61.103 61.107 1 86.76 ? C42 2CV 304 A 1 
HETATM 17 C C43 2CV . . . F 3 -15.441 62.2 61.972 1 86.03 ? C43 2CV 304 A 1 
HETATM 18 O O44 2CV . . . F 3 -14.021 62.232 61.825 1 85.05 ? O44 2CV 304 A 1 
HETATM 19 O O47 2CV . . . F 3 -20.332 58.24 60.935 1 87.64 ? O47 2CV 304 A 1 
HETATM 20 O O49 2CV . . . F 3 -18.397 59.678 59.657 1 87.31 ? O49 2CV 304 A 1 
HETATM 21 O O51 2CV . . . F 3 -17.481 60.61 63.117 1 85.83 ? O51 2CV 304 A 1 
HETATM 22 O O53 2CV . . . F 3 -16.394 61.526 59.746 1 86.78 ? O53 2CV 304 A 1 
HETATM 23 C C60 2CV . . . F 3 -23.454 60.348 63.531 1 83.24 ? C60 2CV 304 A 1 
HETATM 24 O O63 2CV . . . F 3 -23.947 59.747 62.355 1 83.53 ? O63 2CV 304 A 1 
HETATM 25 C C1 2CV . . . F 3 -15.656 61.363 73.326 1 65.62 ? C1 2CV 304 A 1 
HETATM 26 C C0 2CV . . . F 3 -15.75 61.389 74.843 1 65.31 ? C0 2CV 304 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           26 
#