data_6SYT
#
_model_server_result.job_id            sPIEz3sgWDLurI1kVO7K6A 
_model_server_result.datetime_utc      '2024-10-12 05:19:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6syt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":3701}' 
#
_entry.id    6SYT 
#
_exptl.entry_id    6SYT 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              660.035 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'INOSITOL HEXAKISPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C OG SER 218 C SER 218 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.903 ? 
metalc ? metalc2 C OG1 THR 253 C THR 253 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.937 ? 
metalc ? metalc3 E O2B ATP . C ATP 601 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
#
_chem_comp.formula           'C6 H18 O24 P6' 
_chem_comp.formula_weight    660.035 
_chem_comp.id                IHP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'INOSITOL HEXAKISPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 IHP sing 199 n n 
C1 C6 IHP sing 200 n n 
C1 O11 IHP sing 201 n n 
C1 H1 IHP sing 202 n n 
C2 C3 IHP sing 203 n n 
C2 O12 IHP sing 204 n n 
C2 H2 IHP sing 205 n n 
C3 C4 IHP sing 206 n n 
C3 O13 IHP sing 207 n n 
C3 H3 IHP sing 208 n n 
C4 C5 IHP sing 209 n n 
C4 O14 IHP sing 210 n n 
C4 H4 IHP sing 211 n n 
C5 C6 IHP sing 212 n n 
C5 O15 IHP sing 213 n n 
C5 H5 IHP sing 214 n n 
C6 O16 IHP sing 215 n n 
C6 H6 IHP sing 216 n n 
O11 P1 IHP sing 217 n n 
P1 O21 IHP doub 218 n n 
P1 O31 IHP sing 219 n n 
P1 O41 IHP sing 220 n n 
O31 H31 IHP sing 221 n n 
O41 H41 IHP sing 222 n n 
O12 P2 IHP sing 223 n n 
P2 O22 IHP doub 224 n n 
P2 O32 IHP sing 225 n n 
P2 O42 IHP sing 226 n n 
O32 H32 IHP sing 227 n n 
O42 H42 IHP sing 228 n n 
O13 P3 IHP sing 229 n n 
P3 O23 IHP doub 230 n n 
P3 O33 IHP sing 231 n n 
P3 O43 IHP sing 232 n n 
O33 H33 IHP sing 233 n n 
O43 H43 IHP sing 234 n n 
O14 P4 IHP sing 235 n n 
P4 O24 IHP doub 236 n n 
P4 O34 IHP sing 237 n n 
P4 O44 IHP sing 238 n n 
O34 H34 IHP sing 239 n n 
O44 H44 IHP sing 240 n n 
O15 P5 IHP sing 241 n n 
P5 O25 IHP doub 242 n n 
P5 O35 IHP sing 243 n n 
P5 O45 IHP sing 244 n n 
O35 H35 IHP sing 245 n n 
O45 H45 IHP sing 246 n n 
O16 P6 IHP sing 247 n n 
P6 O26 IHP doub 248 n n 
P6 O36 IHP sing 249 n n 
P6 O46 IHP sing 250 n n 
O36 H36 IHP sing 251 n n 
O46 H46 IHP sing 252 n n 
#
_atom_sites.entry_id                     6SYT 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 IHP A 1 3701 1 IHP IHP . 
E 5 ATP C 1 601 1 ATP ATP . 
F 6 MG C 1 602 2 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 IHP . . . D 4 177.557 133.85 189.177 1 45.87 ? C1 IHP 3701 A 1 
HETATM 2 C C2 IHP . . . D 4 176.182 134.394 189.594 1 45.87 ? C2 IHP 3701 A 1 
HETATM 3 C C3 IHP . . . D 4 175.016 133.865 188.744 1 45.87 ? C3 IHP 3701 A 1 
HETATM 4 C C4 IHP . . . D 4 175.247 133.205 187.352 1 45.87 ? C4 IHP 3701 A 1 
HETATM 5 C C5 IHP . . . D 4 176.724 132.991 186.91 1 45.87 ? C5 IHP 3701 A 1 
HETATM 6 C C6 IHP . . . D 4 177.792 133.799 187.656 1 45.87 ? C6 IHP 3701 A 1 
HETATM 7 O O11 IHP . . . D 4 178.553 134.661 189.73 1 45.87 ? O11 IHP 3701 A 1 
HETATM 8 P P1 IHP . . . D 4 179.975 133.899 190.028 1 45.87 ? P1 IHP 3701 A 1 
HETATM 9 O O21 IHP . . . D 4 180.026 133.559 191.497 1 45.87 ? O21 IHP 3701 A 1 
HETATM 10 O O31 IHP . . . D 4 180.037 132.629 189.213 1 45.87 ? O31 IHP 3701 A 1 
HETATM 11 O O41 IHP . . . D 4 181.129 134.796 189.652 1 45.87 ? O41 IHP 3701 A 1 
HETATM 12 O O12 IHP . . . D 4 176.188 135.788 189.492 1 45.87 ? O12 IHP 3701 A 1 
HETATM 13 P P2 IHP . . . D 4 175.898 136.606 190.882 1 45.87 ? P2 IHP 3701 A 1 
HETATM 14 O O22 IHP . . . D 4 177.035 136.33 191.832 1 45.87 ? O22 IHP 3701 A 1 
HETATM 15 O O32 IHP . . . D 4 175.815 138.079 190.582 1 45.87 ? O32 IHP 3701 A 1 
HETATM 16 O O42 IHP . . . D 4 174.601 136.129 191.482 1 45.87 ? O42 IHP 3701 A 1 
HETATM 17 O O13 IHP . . . D 4 173.725 133.753 189.3 1 45.87 ? O13 IHP 3701 A 1 
HETATM 18 P P3 IHP . . . D 4 173.406 132.537 190.357 1 45.87 ? P3 IHP 3701 A 1 
HETATM 19 O O23 IHP . . . D 4 174.292 132.709 191.565 1 45.87 ? O23 IHP 3701 A 1 
HETATM 20 O O33 IHP . . . D 4 171.955 132.599 190.769 1 45.87 ? O33 IHP 3701 A 1 
HETATM 21 O O43 IHP . . . D 4 173.705 131.208 189.705 1 45.87 ? O43 IHP 3701 A 1 
HETATM 22 O O14 IHP . . . D 4 174.15 132.709 186.619 1 45.87 ? O14 IHP 3701 A 1 
HETATM 23 P P4 IHP . . . D 4 174.286 132.507 184.991 1 45.87 ? P4 IHP 3701 A 1 
HETATM 24 O O24 IHP . . . D 4 174.831 131.127 184.723 1 45.87 ? O24 IHP 3701 A 1 
HETATM 25 O O34 IHP . . . D 4 172.931 132.653 184.343 1 45.87 ? O34 IHP 3701 A 1 
HETATM 26 O O44 IHP . . . D 4 175.228 133.541 184.424 1 45.87 ? O44 IHP 3701 A 1 
HETATM 27 O O15 IHP . . . D 4 177.086 131.943 186.03 1 45.87 ? O15 IHP 3701 A 1 
HETATM 28 P P5 IHP . . . D 4 177.931 130.633 186.568 1 45.87 ? P5 IHP 3701 A 1 
HETATM 29 O O25 IHP . . . D 4 177.074 129.844 187.53 1 45.87 ? O25 IHP 3701 A 1 
HETATM 30 O O35 IHP . . . D 4 178.291 129.767 185.386 1 45.87 ? O35 IHP 3701 A 1 
HETATM 31 O O45 IHP . . . D 4 179.199 131.065 187.261 1 45.87 ? O45 IHP 3701 A 1 
HETATM 32 O O16 IHP . . . D 4 177.757 135.106 187.149 1 45.87 ? O16 IHP 3701 A 1 
HETATM 33 P P6 IHP . . . D 4 178.927 135.559 186.082 1 45.87 ? P6 IHP 3701 A 1 
HETATM 34 O O26 IHP . . . D 4 178.797 134.779 184.797 1 45.87 ? O26 IHP 3701 A 1 
HETATM 35 O O36 IHP . . . D 4 178.784 137.031 185.791 1 45.87 ? O36 IHP 3701 A 1 
HETATM 36 O O46 IHP . . . D 4 180.283 135.29 186.684 1 45.87 ? O46 IHP 3701 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           36 
#