data_6SZ0 # _model_server_result.job_id cIyCOgcFz_xYeBmPUPOaww _model_server_result.datetime_utc '2024-11-13 09:23:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6sz0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 6SZ0 # _exptl.entry_id 6SZ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 76.31 _cell.angle_beta 65.696 _cell.angle_gamma 70.744 _cell.entry_id 6SZ0 _cell.length_a 43.197 _cell.length_b 44.204 _cell.length_c 50.154 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6SZ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 239 A LEU 250 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc2 A O ASP 242 A ASP 253 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc3 A O VAL 245 A VAL 256 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? metalc ? metalc4 A O HIS 292 A HIS 303 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc5 A O GLU 294 A GLU 305 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc6 B MG MG . A MG 501 1_555 J O HOH . A HOH 654 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc7 B MG MG . A MG 501 1_555 J O HOH . A HOH 669 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc8 B MG MG . A MG 501 1_555 J O HOH . A HOH 760 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc9 B MG MG . A MG 501 1_555 J O HOH . A HOH 785 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc10 C MG MG . A MG 502 1_555 J O HOH . A HOH 746 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 259 n n C1 C2 PEG sing 260 n n C1 H11 PEG sing 261 n n C1 H12 PEG sing 262 n n O1 HO1 PEG sing 263 n n C2 O2 PEG sing 264 n n C2 H21 PEG sing 265 n n C2 H22 PEG sing 266 n n O2 C3 PEG sing 267 n n C3 C4 PEG sing 268 n n C3 H31 PEG sing 269 n n C3 H32 PEG sing 270 n n C4 O4 PEG sing 271 n n C4 H41 PEG sing 272 n n C4 H42 PEG sing 273 n n O4 HO4 PEG sing 274 n n # _atom_sites.entry_id 6SZ0 _atom_sites.fract_transf_matrix[1][1] 0.02315 _atom_sites.fract_transf_matrix[1][2] -0.008087 _atom_sites.fract_transf_matrix[1][3] -0.009572 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023963 _atom_sites.fract_transf_matrix[2][3] -0.002831 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 501 1 MG MG . C 2 MG A 1 502 2 MG MG . D 3 SO4 A 1 503 1 SO4 SO4 . E 4 PEG A 1 504 1 PEG PEG . F 4 PEG A 1 505 2 PEG PEG . G 5 GOL A 1 506 1 GOL GOL . H 6 EDO A 1 507 1 EDO EDO . I 6 EDO A 1 508 2 EDO EDO . J 7 HOH A 1 601 190 HOH HOH . J 7 HOH A 2 602 119 HOH HOH . J 7 HOH A 3 603 105 HOH HOH . J 7 HOH A 4 604 124 HOH HOH . J 7 HOH A 5 605 98 HOH HOH . J 7 HOH A 6 606 214 HOH HOH . J 7 HOH A 7 607 203 HOH HOH . J 7 HOH A 8 608 172 HOH HOH . J 7 HOH A 9 609 217 HOH HOH . J 7 HOH A 10 610 109 HOH HOH . J 7 HOH A 11 611 143 HOH HOH . J 7 HOH A 12 612 142 HOH HOH . J 7 HOH A 13 613 47 HOH HOH . J 7 HOH A 14 614 209 HOH HOH . J 7 HOH A 15 615 99 HOH HOH . J 7 HOH A 16 616 108 HOH HOH . J 7 HOH A 17 617 173 HOH HOH . J 7 HOH A 18 618 79 HOH HOH . J 7 HOH A 19 619 193 HOH HOH . J 7 HOH A 20 620 30 HOH HOH . J 7 HOH A 21 621 131 HOH HOH . J 7 HOH A 22 622 176 HOH HOH . J 7 HOH A 23 623 91 HOH HOH . J 7 HOH A 24 624 18 HOH HOH . J 7 HOH A 25 625 95 HOH HOH . J 7 HOH A 26 626 151 HOH HOH . J 7 HOH A 27 627 49 HOH HOH . J 7 HOH A 28 628 185 HOH HOH . J 7 HOH A 29 629 33 HOH HOH . J 7 HOH A 30 630 191 HOH HOH . J 7 HOH A 31 631 71 HOH HOH . J 7 HOH A 32 632 24 HOH HOH . J 7 HOH A 33 633 44 HOH HOH . J 7 HOH A 34 634 113 HOH HOH . J 7 HOH A 35 635 61 HOH HOH . J 7 HOH A 36 636 153 HOH HOH . J 7 HOH A 37 637 81 HOH HOH . J 7 HOH A 38 638 27 HOH HOH . J 7 HOH A 39 639 208 HOH HOH . J 7 HOH A 40 640 50 HOH HOH . J 7 HOH A 41 641 34 HOH HOH . J 7 HOH A 42 642 60 HOH HOH . J 7 HOH A 43 643 160 HOH HOH . J 7 HOH A 44 644 54 HOH HOH . J 7 HOH A 45 645 112 HOH HOH . J 7 HOH A 46 646 88 HOH HOH . J 7 HOH A 47 647 175 HOH HOH . J 7 HOH A 48 648 35 HOH HOH . J 7 HOH A 49 649 12 HOH HOH . J 7 HOH A 50 650 29 HOH HOH . J 7 HOH A 51 651 133 HOH HOH . J 7 HOH A 52 652 197 HOH HOH . J 7 HOH A 53 653 80 HOH HOH . J 7 HOH A 54 654 67 HOH HOH . J 7 HOH A 55 655 96 HOH HOH . J 7 HOH A 56 656 76 HOH HOH . J 7 HOH A 57 657 69 HOH HOH . J 7 HOH A 58 658 1 HOH HOH . J 7 HOH A 59 659 165 HOH HOH . J 7 HOH A 60 660 205 HOH HOH . J 7 HOH A 61 661 51 HOH HOH . J 7 HOH A 62 662 9 HOH HOH . J 7 HOH A 63 663 55 HOH HOH . J 7 HOH A 64 664 189 HOH HOH . J 7 HOH A 65 665 25 HOH HOH . J 7 HOH A 66 666 5 HOH HOH . J 7 HOH A 67 667 36 HOH HOH . J 7 HOH A 68 668 23 HOH HOH . J 7 HOH A 69 669 104 HOH HOH . J 7 HOH A 70 670 59 HOH HOH . J 7 HOH A 71 671 68 HOH HOH . J 7 HOH A 72 672 65 HOH HOH . J 7 HOH A 73 673 204 HOH HOH . J 7 HOH A 74 674 56 HOH HOH . J 7 HOH A 75 675 37 HOH HOH . J 7 HOH A 76 676 97 HOH HOH . J 7 HOH A 77 677 129 HOH HOH . J 7 HOH A 78 678 152 HOH HOH . J 7 HOH A 79 679 221 HOH HOH . J 7 HOH A 80 680 92 HOH HOH . J 7 HOH A 81 681 11 HOH HOH . J 7 HOH A 82 682 10 HOH HOH . J 7 HOH A 83 683 15 HOH HOH . J 7 HOH A 84 684 7 HOH HOH . J 7 HOH A 85 685 161 HOH HOH . J 7 HOH A 86 686 52 HOH HOH . J 7 HOH A 87 687 125 HOH HOH . J 7 HOH A 88 688 123 HOH HOH . J 7 HOH A 89 689 198 HOH HOH . J 7 HOH A 90 690 72 HOH HOH . J 7 HOH A 91 691 200 HOH HOH . J 7 HOH A 92 692 57 HOH HOH . J 7 HOH A 93 693 139 HOH HOH . J 7 HOH A 94 694 43 HOH HOH . J 7 HOH A 95 695 154 HOH HOH . J 7 HOH A 96 696 83 HOH HOH . J 7 HOH A 97 697 32 HOH HOH . J 7 HOH A 98 698 26 HOH HOH . J 7 HOH A 99 699 115 HOH HOH . J 7 HOH A 100 700 53 HOH HOH . J 7 HOH A 101 701 171 HOH HOH . J 7 HOH A 102 702 100 HOH HOH . J 7 HOH A 103 703 162 HOH HOH . J 7 HOH A 104 704 137 HOH HOH . J 7 HOH A 105 705 201 HOH HOH . J 7 HOH A 106 706 45 HOH HOH . J 7 HOH A 107 707 140 HOH HOH . J 7 HOH A 108 708 4 HOH HOH . J 7 HOH A 109 709 77 HOH HOH . J 7 HOH A 110 710 2 HOH HOH . J 7 HOH A 111 711 21 HOH HOH . J 7 HOH A 112 712 8 HOH HOH . J 7 HOH A 113 713 42 HOH HOH . J 7 HOH A 114 714 78 HOH HOH . J 7 HOH A 115 715 118 HOH HOH . J 7 HOH A 116 716 13 HOH HOH . J 7 HOH A 117 717 41 HOH HOH . J 7 HOH A 118 718 144 HOH HOH . J 7 HOH A 119 719 150 HOH HOH . J 7 HOH A 120 720 116 HOH HOH . J 7 HOH A 121 721 14 HOH HOH . J 7 HOH A 122 722 31 HOH HOH . J 7 HOH A 123 723 102 HOH HOH . J 7 HOH A 124 724 178 HOH HOH . J 7 HOH A 125 725 16 HOH HOH . J 7 HOH A 126 726 46 HOH HOH . J 7 HOH A 127 727 145 HOH HOH . J 7 HOH A 128 728 126 HOH HOH . J 7 HOH A 129 729 184 HOH HOH . J 7 HOH A 130 730 19 HOH HOH . J 7 HOH A 131 731 20 HOH HOH . J 7 HOH A 132 732 62 HOH HOH . J 7 HOH A 133 733 28 HOH HOH . J 7 HOH A 134 734 82 HOH HOH . J 7 HOH A 135 735 22 HOH HOH . J 7 HOH A 136 736 158 HOH HOH . J 7 HOH A 137 737 84 HOH HOH . J 7 HOH A 138 738 179 HOH HOH . J 7 HOH A 139 739 222 HOH HOH . J 7 HOH A 140 740 211 HOH HOH . J 7 HOH A 141 741 107 HOH HOH . J 7 HOH A 142 742 188 HOH HOH . J 7 HOH A 143 743 170 HOH HOH . J 7 HOH A 144 744 86 HOH HOH . J 7 HOH A 145 745 157 HOH HOH . J 7 HOH A 146 746 103 HOH HOH . J 7 HOH A 147 747 130 HOH HOH . J 7 HOH A 148 748 127 HOH HOH . J 7 HOH A 149 749 218 HOH HOH . J 7 HOH A 150 750 196 HOH HOH . J 7 HOH A 151 751 135 HOH HOH . J 7 HOH A 152 752 38 HOH HOH . J 7 HOH A 153 753 141 HOH HOH . J 7 HOH A 154 754 66 HOH HOH . J 7 HOH A 155 755 3 HOH HOH . J 7 HOH A 156 756 128 HOH HOH . J 7 HOH A 157 757 117 HOH HOH . J 7 HOH A 158 758 114 HOH HOH . J 7 HOH A 159 759 134 HOH HOH . J 7 HOH A 160 760 101 HOH HOH . J 7 HOH A 161 761 132 HOH HOH . J 7 HOH A 162 762 39 HOH HOH . J 7 HOH A 163 763 48 HOH HOH . J 7 HOH A 164 764 58 HOH HOH . J 7 HOH A 165 765 110 HOH HOH . J 7 HOH A 166 766 85 HOH HOH . J 7 HOH A 167 767 155 HOH HOH . J 7 HOH A 168 768 216 HOH HOH . J 7 HOH A 169 769 106 HOH HOH . J 7 HOH A 170 770 89 HOH HOH . J 7 HOH A 171 771 156 HOH HOH . J 7 HOH A 172 772 224 HOH HOH . J 7 HOH A 173 773 63 HOH HOH . J 7 HOH A 174 774 174 HOH HOH . J 7 HOH A 175 775 164 HOH HOH . J 7 HOH A 176 776 146 HOH HOH . J 7 HOH A 177 777 213 HOH HOH . J 7 HOH A 178 778 159 HOH HOH . J 7 HOH A 179 779 212 HOH HOH . J 7 HOH A 180 780 120 HOH HOH . J 7 HOH A 181 781 87 HOH HOH . J 7 HOH A 182 782 182 HOH HOH . J 7 HOH A 183 783 74 HOH HOH . J 7 HOH A 184 784 70 HOH HOH . J 7 HOH A 185 785 40 HOH HOH . J 7 HOH A 186 786 163 HOH HOH . J 7 HOH A 187 787 194 HOH HOH . J 7 HOH A 188 788 195 HOH HOH . J 7 HOH A 189 789 138 HOH HOH . J 7 HOH A 190 790 186 HOH HOH . J 7 HOH A 191 791 93 HOH HOH . J 7 HOH A 192 792 202 HOH HOH . J 7 HOH A 193 793 111 HOH HOH . J 7 HOH A 194 794 210 HOH HOH . J 7 HOH A 195 795 183 HOH HOH . J 7 HOH A 196 796 121 HOH HOH . J 7 HOH A 197 797 207 HOH HOH . J 7 HOH A 198 798 181 HOH HOH . J 7 HOH A 199 799 6 HOH HOH . J 7 HOH A 200 800 187 HOH HOH . J 7 HOH A 201 801 220 HOH HOH . J 7 HOH A 202 802 90 HOH HOH . J 7 HOH A 203 803 64 HOH HOH . J 7 HOH A 204 804 166 HOH HOH . J 7 HOH A 205 805 136 HOH HOH . J 7 HOH A 206 806 215 HOH HOH . J 7 HOH A 207 807 177 HOH HOH . J 7 HOH A 208 808 149 HOH HOH . J 7 HOH A 209 809 73 HOH HOH . J 7 HOH A 210 810 17 HOH HOH . J 7 HOH A 211 811 94 HOH HOH . J 7 HOH A 212 812 192 HOH HOH . J 7 HOH A 213 813 75 HOH HOH . J 7 HOH A 214 814 168 HOH HOH . J 7 HOH A 215 815 223 HOH HOH . J 7 HOH A 216 816 147 HOH HOH . J 7 HOH A 217 817 169 HOH HOH . J 7 HOH A 218 818 167 HOH HOH . J 7 HOH A 219 819 148 HOH HOH . J 7 HOH A 220 820 219 HOH HOH . J 7 HOH A 221 821 122 HOH HOH . J 7 HOH A 222 822 206 HOH HOH . J 7 HOH A 223 823 199 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 4 40.792 13.424 26.162 1 46.98 ? C1 PEG 504 A 1 HETATM 2 O O1 PEG . . . E 4 41.142 12.141 26.66 1 50 ? O1 PEG 504 A 1 HETATM 3 C C2 PEG . . . E 4 40.96 14.499 27.2 1 41.78 ? C2 PEG 504 A 1 HETATM 4 O O2 PEG . . . E 4 41.199 15.755 26.57 1 49.75 ? O2 PEG 504 A 1 HETATM 5 C C3 PEG . . . E 4 41.429 16.823 27.491 1 52.06 ? C3 PEG 504 A 1 HETATM 6 C C4 PEG . . . E 4 42.67 16.577 28.3 1 52.19 ? C4 PEG 504 A 1 HETATM 7 O O4 PEG . . . E 4 43.536 17.704 28.345 1 57.55 ? O4 PEG 504 A 1 HETATM 8 H H11 PEG . . . E 4 41.356 13.632 25.388 1 56.36 ? H11 PEG 504 A 1 HETATM 9 H H12 PEG . . . E 4 39.859 13.407 25.863 1 56.36 ? H12 PEG 504 A 1 HETATM 10 H HO1 PEG . . . E 4 40.658 11.958 27.329 1 59.99 ? HO1 PEG 504 A 1 HETATM 11 H H21 PEG . . . E 4 40.148 14.557 27.75 1 50.13 ? H21 PEG 504 A 1 HETATM 12 H H22 PEG . . . E 4 41.715 14.277 27.787 1 50.13 ? H22 PEG 504 A 1 HETATM 13 H H31 PEG . . . E 4 41.523 17.666 26.996 1 62.46 ? H31 PEG 504 A 1 HETATM 14 H H32 PEG . . . E 4 40.657 16.905 28.093 1 62.46 ? H32 PEG 504 A 1 HETATM 15 H H41 PEG . . . E 4 43.157 15.819 27.914 1 62.61 ? H41 PEG 504 A 1 HETATM 16 H H42 PEG . . . E 4 42.412 16.339 29.215 1 62.61 ? H42 PEG 504 A 1 HETATM 17 H HO4 PEG . . . E 4 43.122 18.362 28.679 1 69.05 ? HO4 PEG 504 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 17 #