data_6SZ4
#
_model_server_result.job_id            70ISJ9oJ9_1lvI4TZP7tEw 
_model_server_result.datetime_utc      '2025-02-16 11:26:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6sz4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    6SZ4 
#
_exptl.entry_id    6SZ4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              194.139 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'beta-D-glucopyranuronic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         76.095 
_cell.angle_beta          66.231 
_cell.angle_gamma         70.854 
_cell.entry_id            6SZ4 
_cell.length_a            43.104 
_cell.length_b            44.15 
_cell.length_c            50.179 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6SZ4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            OG 
_struct_conn.ptnr1_label_comp_id            SER 
_struct_conn.ptnr1_label_seq_id             256 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             SER 
_struct_conn.ptnr1_auth_seq_id              267 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C6 
_struct_conn.ptnr2_label_comp_id            BDP 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             BDP 
_struct_conn.ptnr2_auth_seq_id              501 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.37 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C6 H10 O7' 
_chem_comp.formula_weight    194.139 
_chem_comp.id                BDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'beta-D-glucopyranuronic acid' 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     'beta-D-glucuronic acid;D-glucuronic acid;glucuronic acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BDP sing 70 n n 
C1 O5 BDP sing 71 n n 
C1 O1 BDP sing 72 n n 
C1 H1 BDP sing 73 n n 
C2 C3 BDP sing 74 n n 
C2 O2 BDP sing 75 n n 
C2 H2 BDP sing 76 n n 
C3 C4 BDP sing 77 n n 
C3 O3 BDP sing 78 n n 
C3 H3 BDP sing 79 n n 
C4 C5 BDP sing 80 n n 
C4 O4 BDP sing 81 n n 
C4 H4 BDP sing 82 n n 
C5 C6 BDP sing 83 n n 
C5 O5 BDP sing 84 n n 
C5 H5 BDP sing 85 n n 
C6 O6A BDP doub 86 n n 
C6 O6B BDP sing 87 n n 
O2 HO2 BDP sing 88 n n 
O3 HO3 BDP sing 89 n n 
O4 HO4 BDP sing 90 n n 
O1 HO1 BDP sing 91 n n 
O6B HO6B BDP sing 92 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
BDP DGlcpAb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
BDP 'b-D-glucopyranuronic acid' 'COMMON NAME' GMML 1 
BDP b-D-GlcpA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
BDP GlcA 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     6SZ4 
_atom_sites.fract_transf_matrix[1][1]    0.0232 
_atom_sites.fract_transf_matrix[1][2]    -0.008054 
_atom_sites.fract_transf_matrix[1][3]    -0.009283 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023976 
_atom_sites.fract_transf_matrix[2][3]    -0.003022 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021948 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BDP A 1 501 500 BDP BDP . 
C 3 FMT A 1 502 1 FMT FMT . 
D 4 HOH A 1 601 65 HOH HOH . 
D 4 HOH A 2 602 76 HOH HOH . 
D 4 HOH A 3 603 61 HOH HOH . 
D 4 HOH A 4 604 45 HOH HOH . 
D 4 HOH A 5 605 27 HOH HOH . 
D 4 HOH A 6 606 5 HOH HOH . 
D 4 HOH A 7 607 37 HOH HOH . 
D 4 HOH A 8 608 50 HOH HOH . 
D 4 HOH A 9 609 20 HOH HOH . 
D 4 HOH A 10 610 70 HOH HOH . 
D 4 HOH A 11 611 103 HOH HOH . 
D 4 HOH A 12 612 56 HOH HOH . 
D 4 HOH A 13 613 60 HOH HOH . 
D 4 HOH A 14 614 38 HOH HOH . 
D 4 HOH A 15 615 81 HOH HOH . 
D 4 HOH A 16 616 58 HOH HOH . 
D 4 HOH A 17 617 3 HOH HOH . 
D 4 HOH A 18 618 4 HOH HOH . 
D 4 HOH A 19 619 77 HOH HOH . 
D 4 HOH A 20 620 47 HOH HOH . 
D 4 HOH A 21 621 74 HOH HOH . 
D 4 HOH A 22 622 30 HOH HOH . 
D 4 HOH A 23 623 23 HOH HOH . 
D 4 HOH A 24 624 48 HOH HOH . 
D 4 HOH A 25 625 40 HOH HOH . 
D 4 HOH A 26 626 59 HOH HOH . 
D 4 HOH A 27 627 49 HOH HOH . 
D 4 HOH A 28 628 53 HOH HOH . 
D 4 HOH A 29 629 72 HOH HOH . 
D 4 HOH A 30 630 108 HOH HOH . 
D 4 HOH A 31 631 11 HOH HOH . 
D 4 HOH A 32 632 80 HOH HOH . 
D 4 HOH A 33 633 98 HOH HOH . 
D 4 HOH A 34 634 46 HOH HOH . 
D 4 HOH A 35 635 85 HOH HOH . 
D 4 HOH A 36 636 22 HOH HOH . 
D 4 HOH A 37 637 107 HOH HOH . 
D 4 HOH A 38 638 44 HOH HOH . 
D 4 HOH A 39 639 35 HOH HOH . 
D 4 HOH A 40 640 1 HOH HOH . 
D 4 HOH A 41 641 29 HOH HOH . 
D 4 HOH A 42 642 28 HOH HOH . 
D 4 HOH A 43 643 31 HOH HOH . 
D 4 HOH A 44 644 89 HOH HOH . 
D 4 HOH A 45 645 18 HOH HOH . 
D 4 HOH A 46 646 94 HOH HOH . 
D 4 HOH A 47 647 82 HOH HOH . 
D 4 HOH A 48 648 16 HOH HOH . 
D 4 HOH A 49 649 43 HOH HOH . 
D 4 HOH A 50 650 51 HOH HOH . 
D 4 HOH A 51 651 42 HOH HOH . 
D 4 HOH A 52 652 8 HOH HOH . 
D 4 HOH A 53 653 66 HOH HOH . 
D 4 HOH A 54 654 6 HOH HOH . 
D 4 HOH A 55 655 62 HOH HOH . 
D 4 HOH A 56 656 55 HOH HOH . 
D 4 HOH A 57 657 91 HOH HOH . 
D 4 HOH A 58 658 14 HOH HOH . 
D 4 HOH A 59 659 104 HOH HOH . 
D 4 HOH A 60 660 13 HOH HOH . 
D 4 HOH A 61 661 34 HOH HOH . 
D 4 HOH A 62 662 21 HOH HOH . 
D 4 HOH A 63 663 78 HOH HOH . 
D 4 HOH A 64 664 39 HOH HOH . 
D 4 HOH A 65 665 25 HOH HOH . 
D 4 HOH A 66 666 41 HOH HOH . 
D 4 HOH A 67 667 97 HOH HOH . 
D 4 HOH A 68 668 83 HOH HOH . 
D 4 HOH A 69 669 101 HOH HOH . 
D 4 HOH A 70 670 64 HOH HOH . 
D 4 HOH A 71 671 86 HOH HOH . 
D 4 HOH A 72 672 105 HOH HOH . 
D 4 HOH A 73 673 19 HOH HOH . 
D 4 HOH A 74 674 52 HOH HOH . 
D 4 HOH A 75 675 17 HOH HOH . 
D 4 HOH A 76 676 33 HOH HOH . 
D 4 HOH A 77 677 10 HOH HOH . 
D 4 HOH A 78 678 99 HOH HOH . 
D 4 HOH A 79 679 106 HOH HOH . 
D 4 HOH A 80 680 71 HOH HOH . 
D 4 HOH A 81 681 102 HOH HOH . 
D 4 HOH A 82 682 9 HOH HOH . 
D 4 HOH A 83 683 12 HOH HOH . 
D 4 HOH A 84 684 95 HOH HOH . 
D 4 HOH A 85 685 15 HOH HOH . 
D 4 HOH A 86 686 36 HOH HOH . 
D 4 HOH A 87 687 2 HOH HOH . 
D 4 HOH A 88 688 100 HOH HOH . 
D 4 HOH A 89 689 7 HOH HOH . 
D 4 HOH A 90 690 73 HOH HOH . 
D 4 HOH A 91 691 110 HOH HOH . 
D 4 HOH A 92 692 57 HOH HOH . 
D 4 HOH A 93 693 24 HOH HOH . 
D 4 HOH A 94 694 68 HOH HOH . 
D 4 HOH A 95 695 92 HOH HOH . 
D 4 HOH A 96 696 63 HOH HOH . 
D 4 HOH A 97 697 96 HOH HOH . 
D 4 HOH A 98 698 32 HOH HOH . 
D 4 HOH A 99 699 69 HOH HOH . 
D 4 HOH A 100 700 90 HOH HOH . 
D 4 HOH A 101 701 109 HOH HOH . 
D 4 HOH A 102 702 93 HOH HOH . 
D 4 HOH A 103 703 79 HOH HOH . 
D 4 HOH A 104 704 87 HOH HOH . 
D 4 HOH A 105 705 67 HOH HOH . 
D 4 HOH A 106 706 88 HOH HOH . 
D 4 HOH A 107 707 26 HOH HOH . 
D 4 HOH A 108 708 84 HOH HOH . 
D 4 HOH A 109 709 54 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BDP . . . B 2 18.307 8.149 16.262 1 43 ? C1 BDP 501 A 1 
HETATM 2 C C2 BDP . . . B 2 19.059 9.49 16.128 1 34.64 ? C2 BDP 501 A 1 
HETATM 3 C C3 BDP . . . B 2 20.402 9.146 15.485 1 26.46 ? C3 BDP 501 A 1 
HETATM 4 C C4 BDP . . . B 2 21.17 8.063 16.253 1 32.19 ? C4 BDP 501 A 1 
HETATM 5 C C5 BDP . . . B 2 20.286 6.829 16.376 1 28.41 ? C5 BDP 501 A 1 
HETATM 6 C C6 BDP . . . B 2 21.018 5.729 17.136 1 27.22 ? C6 BDP 501 A 1 
HETATM 7 O O2 BDP . . . B 2 18.348 10.437 15.332 1 29.86 ? O2 BDP 501 A 1 
HETATM 8 O O3 BDP . . . B 2 21.205 10.29 15.305 1 29.35 ? O3 BDP 501 A 1 
HETATM 9 O O4 BDP . . . B 2 22.365 7.767 15.505 1 32.1 ? O4 BDP 501 A 1 
HETATM 10 O O5 BDP . . . B 2 19.068 7.19 17.04 1 35.61 ? O5 BDP 501 A 1 
HETATM 11 O O6A BDP . . . B 2 20.913 5.661 18.386 1 28.85 ? O6A BDP 501 A 1 
HETATM 12 O O1 BDP . . . B 2 17.026 8.425 16.821 1 45.07 ? O1 BDP 501 A 1 
HETATM 13 H H1 BDP . . . B 2 18.183 7.691 15.27 1 51.6 ? H1 BDP 501 A 1 
HETATM 14 H H2 BDP . . . B 2 19.173 9.968 17.111 1 41.57 ? H2 BDP 501 A 1 
HETATM 15 H H3 BDP . . . B 2 20.167 8.737 14.493 1 31.76 ? H3 BDP 501 A 1 
HETATM 16 H H4 BDP . . . B 2 21.445 8.397 17.264 1 38.63 ? H4 BDP 501 A 1 
HETATM 17 H H5 BDP . . . B 2 20.059 6.445 15.372 1 34.09 ? H5 BDP 501 A 1 
HETATM 18 H HO2 BDP . . . B 2 17.561 10.733 15.809 1 35.84 ? HO2 BDP 501 A 1 
HETATM 19 H HO3 BDP . . . B 2 20.71 11.076 15.573 1 35.22 ? HO3 BDP 501 A 1 
HETATM 20 H HO4 BDP . . . B 2 22.855 7.06 15.947 1 38.52 ? HO4 BDP 501 A 1 
HETATM 21 H HO1 BDP . . . B 2 16.616 7.598 17.109 1 54.08 ? HO1 BDP 501 A 1 
#
_model_server_stats.io_time_ms              56 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    99 
_model_server_stats.query_time_ms           1433 
_model_server_stats.encode_time_ms          19 
_model_server_stats.element_count           21 
#