data_6T1K # _model_server_result.job_id vLLjuSBUdep6bZosC-FwfQ _model_server_result.datetime_utc '2024-11-17 08:27:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t1k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 6T1K # _exptl.entry_id 6T1K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6T1K _cell.length_a 57.275 _cell.length_b 57.275 _cell.length_c 175.019 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T1K _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall 'I 4bw 2bw' _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 57.275 57.275 0 3 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 57.275 57.275 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6T1K _atom_sites.fract_transf_matrix[1][1] 0.01746 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01746 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005714 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HL9 A 1 201 201 HL9 HL9 . C 3 EDO A 1 202 301 EDO EDO . D 3 EDO A 1 203 501 EDO EDO . E 3 EDO A 1 204 601 EDO EDO . F 4 HOH A 1 301 124 HOH HOH . F 4 HOH A 2 302 71 HOH HOH . F 4 HOH A 3 303 58 HOH HOH . F 4 HOH A 4 304 144 HOH HOH . F 4 HOH A 5 305 136 HOH HOH . F 4 HOH A 6 306 125 HOH HOH . F 4 HOH A 7 307 112 HOH HOH . F 4 HOH A 8 308 111 HOH HOH . F 4 HOH A 9 309 118 HOH HOH . F 4 HOH A 10 310 38 HOH HOH . F 4 HOH A 11 311 61 HOH HOH . F 4 HOH A 12 312 93 HOH HOH . F 4 HOH A 13 313 128 HOH HOH . F 4 HOH A 14 314 119 HOH HOH . F 4 HOH A 15 315 50 HOH HOH . F 4 HOH A 16 316 92 HOH HOH . F 4 HOH A 17 317 78 HOH HOH . F 4 HOH A 18 318 64 HOH HOH . F 4 HOH A 19 319 94 HOH HOH . F 4 HOH A 20 320 39 HOH HOH . F 4 HOH A 21 321 16 HOH HOH . F 4 HOH A 22 322 6 HOH HOH . F 4 HOH A 23 323 62 HOH HOH . F 4 HOH A 24 324 68 HOH HOH . F 4 HOH A 25 325 79 HOH HOH . F 4 HOH A 26 326 24 HOH HOH . F 4 HOH A 27 327 59 HOH HOH . F 4 HOH A 28 328 25 HOH HOH . F 4 HOH A 29 329 36 HOH HOH . F 4 HOH A 30 330 75 HOH HOH . F 4 HOH A 31 331 4 HOH HOH . F 4 HOH A 32 332 40 HOH HOH . F 4 HOH A 33 333 21 HOH HOH . F 4 HOH A 34 334 81 HOH HOH . F 4 HOH A 35 335 29 HOH HOH . F 4 HOH A 36 336 18 HOH HOH . F 4 HOH A 37 337 83 HOH HOH . F 4 HOH A 38 338 114 HOH HOH . F 4 HOH A 39 339 45 HOH HOH . F 4 HOH A 40 340 123 HOH HOH . F 4 HOH A 41 341 13 HOH HOH . F 4 HOH A 42 342 145 HOH HOH . F 4 HOH A 43 343 110 HOH HOH . F 4 HOH A 44 344 77 HOH HOH . F 4 HOH A 45 345 7 HOH HOH . F 4 HOH A 46 346 5 HOH HOH . F 4 HOH A 47 347 127 HOH HOH . F 4 HOH A 48 348 32 HOH HOH . F 4 HOH A 49 349 41 HOH HOH . F 4 HOH A 50 350 15 HOH HOH . F 4 HOH A 51 351 19 HOH HOH . F 4 HOH A 52 352 2 HOH HOH . F 4 HOH A 53 353 129 HOH HOH . F 4 HOH A 54 354 8 HOH HOH . F 4 HOH A 55 355 26 HOH HOH . F 4 HOH A 56 356 57 HOH HOH . F 4 HOH A 57 357 65 HOH HOH . F 4 HOH A 58 358 27 HOH HOH . F 4 HOH A 59 359 137 HOH HOH . F 4 HOH A 60 360 149 HOH HOH . F 4 HOH A 61 361 74 HOH HOH . F 4 HOH A 62 362 139 HOH HOH . F 4 HOH A 63 363 54 HOH HOH . F 4 HOH A 64 364 148 HOH HOH . F 4 HOH A 65 365 14 HOH HOH . F 4 HOH A 66 366 142 HOH HOH . F 4 HOH A 67 367 3 HOH HOH . F 4 HOH A 68 368 48 HOH HOH . F 4 HOH A 69 369 147 HOH HOH . F 4 HOH A 70 370 1 HOH HOH . F 4 HOH A 71 371 52 HOH HOH . F 4 HOH A 72 372 91 HOH HOH . F 4 HOH A 73 373 9 HOH HOH . F 4 HOH A 74 374 122 HOH HOH . F 4 HOH A 75 375 51 HOH HOH . F 4 HOH A 76 376 10 HOH HOH . F 4 HOH A 77 377 131 HOH HOH . F 4 HOH A 78 378 42 HOH HOH . F 4 HOH A 79 379 33 HOH HOH . F 4 HOH A 80 380 17 HOH HOH . F 4 HOH A 81 381 20 HOH HOH . F 4 HOH A 82 382 12 HOH HOH . F 4 HOH A 83 383 76 HOH HOH . F 4 HOH A 84 384 22 HOH HOH . F 4 HOH A 85 385 69 HOH HOH . F 4 HOH A 86 386 90 HOH HOH . F 4 HOH A 87 387 135 HOH HOH . F 4 HOH A 88 388 11 HOH HOH . F 4 HOH A 89 389 43 HOH HOH . F 4 HOH A 90 390 63 HOH HOH . F 4 HOH A 91 391 121 HOH HOH . F 4 HOH A 92 392 70 HOH HOH . F 4 HOH A 93 393 44 HOH HOH . F 4 HOH A 94 394 95 HOH HOH . F 4 HOH A 95 395 34 HOH HOH . F 4 HOH A 96 396 88 HOH HOH . F 4 HOH A 97 397 37 HOH HOH . F 4 HOH A 98 398 141 HOH HOH . F 4 HOH A 99 399 30 HOH HOH . F 4 HOH A 100 400 85 HOH HOH . F 4 HOH A 101 401 146 HOH HOH . F 4 HOH A 102 402 120 HOH HOH . F 4 HOH A 103 403 126 HOH HOH . F 4 HOH A 104 404 60 HOH HOH . F 4 HOH A 105 405 96 HOH HOH . F 4 HOH A 106 406 117 HOH HOH . F 4 HOH A 107 407 49 HOH HOH . F 4 HOH A 108 408 28 HOH HOH . F 4 HOH A 109 409 23 HOH HOH . F 4 HOH A 110 410 67 HOH HOH . F 4 HOH A 111 411 89 HOH HOH . F 4 HOH A 112 412 31 HOH HOH . F 4 HOH A 113 413 35 HOH HOH . F 4 HOH A 114 414 86 HOH HOH . F 4 HOH A 115 415 109 HOH HOH . F 4 HOH A 116 416 66 HOH HOH . F 4 HOH A 117 417 130 HOH HOH . F 4 HOH A 118 418 98 HOH HOH . F 4 HOH A 119 419 46 HOH HOH . F 4 HOH A 120 420 103 HOH HOH . F 4 HOH A 121 421 56 HOH HOH . F 4 HOH A 122 422 101 HOH HOH . F 4 HOH A 123 423 132 HOH HOH . F 4 HOH A 124 424 134 HOH HOH . F 4 HOH A 125 425 133 HOH HOH . F 4 HOH A 126 426 84 HOH HOH . F 4 HOH A 127 427 102 HOH HOH . F 4 HOH A 128 428 97 HOH HOH . F 4 HOH A 129 429 100 HOH HOH . F 4 HOH A 130 430 140 HOH HOH . F 4 HOH A 131 431 105 HOH HOH . F 4 HOH A 132 432 138 HOH HOH . F 4 HOH A 133 433 55 HOH HOH . F 4 HOH A 134 434 108 HOH HOH . F 4 HOH A 135 435 116 HOH HOH . F 4 HOH A 136 436 115 HOH HOH . F 4 HOH A 137 437 73 HOH HOH . F 4 HOH A 138 438 104 HOH HOH . F 4 HOH A 139 439 106 HOH HOH . F 4 HOH A 140 440 143 HOH HOH . F 4 HOH A 141 441 53 HOH HOH . F 4 HOH A 142 442 113 HOH HOH . F 4 HOH A 143 443 87 HOH HOH . F 4 HOH A 144 444 72 HOH HOH . F 4 HOH A 145 445 107 HOH HOH . F 4 HOH A 146 446 80 HOH HOH . F 4 HOH A 147 447 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 6.715 14.994 -12.333 1 53.39 ? C1 EDO 204 A 1 HETATM 2 O O1 EDO . . . E 3 7.602 14.465 -13.335 1 66.28 ? O1 EDO 204 A 1 HETATM 3 C C2 EDO . . . E 3 7.203 16.379 -11.904 1 42.53 ? C2 EDO 204 A 1 HETATM 4 O O2 EDO . . . E 3 6.435 16.915 -10.798 1 29.85 ? O2 EDO 204 A 1 HETATM 5 H H11 EDO . . . E 3 6.688 14.325 -11.47 1 64.07 ? H11 EDO 204 A 1 HETATM 6 H H12 EDO . . . E 3 5.701 15.064 -12.733 1 64.07 ? H12 EDO 204 A 1 HETATM 7 H HO1 EDO . . . E 3 7.248 13.631 -13.672 1 79.54 ? HO1 EDO 204 A 1 HETATM 8 H H21 EDO . . . E 3 7.133 17.062 -12.753 1 51.03 ? H21 EDO 204 A 1 HETATM 9 H H22 EDO . . . E 3 8.253 16.313 -11.612 1 51.03 ? H22 EDO 204 A 1 HETATM 10 H HO2 EDO . . . E 3 6.795 17.775 -10.543 1 35.82 ? HO2 EDO 204 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 10 #