data_6T1Z # _model_server_result.job_id hvflcNLU9ZyrJ9Yj4vNBRQ _model_server_result.datetime_utc '2025-02-26 05:14:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t1z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6T1Z # _exptl.entry_id 6T1Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 452.551 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6T1Z _cell.length_a 104.76 _cell.length_b 139.99 _cell.length_c 115.7 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T1Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H28 N6 O' _chem_comp.formula_weight 452.551 _chem_comp.id HT1 _chem_comp.mon_nstd_flag . _chem_comp.name "2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HOECHST 33342' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HT1 sing 165 n n C1 C2 HT1 doub 166 n y C1 C6 HT1 sing 167 n y O1 C26 HT1 sing 168 n n C2 C3 HT1 sing 169 n y C2 H2 HT1 sing 170 n n C3 C4 HT1 doub 171 n y C3 H3 HT1 sing 172 n n C4 C5 HT1 sing 173 n y C4 C7 HT1 sing 174 n y C5 C6 HT1 doub 175 n y C5 H5 HT1 sing 176 n n C6 H6 HT1 sing 177 n n C7 N1 HT1 sing 178 n y C7 N2 HT1 doub 179 n y N1 C8 HT1 sing 180 n y N1 HN1 HT1 sing 181 n n C8 C9 HT1 doub 182 n y C8 C13 HT1 sing 183 n y C9 N2 HT1 sing 184 n y C9 C10 HT1 sing 185 n y C10 C11 HT1 doub 186 n y C10 H10 HT1 sing 187 n n C11 C12 HT1 sing 188 n y C11 H11 HT1 sing 189 n n C12 C13 HT1 doub 190 n y C12 C14 HT1 sing 191 n y C13 H13 HT1 sing 192 n n C14 N3 HT1 sing 193 n y C14 N4 HT1 doub 194 n y N3 C15 HT1 sing 195 n y N3 HN3 HT1 sing 196 n n C15 C16 HT1 doub 197 n y C15 C20 HT1 sing 198 n y C16 N4 HT1 sing 199 n y C16 C17 HT1 sing 200 n y C17 C18 HT1 doub 201 n y C17 H17 HT1 sing 202 n n C18 C19 HT1 sing 203 n y C18 H18 HT1 sing 204 n n C19 C20 HT1 doub 205 n y C19 N5 HT1 sing 206 n n C20 H20 HT1 sing 207 n n N5 C21 HT1 sing 208 n n N5 C24 HT1 sing 209 n n C21 C22 HT1 sing 210 n n C21 H211 HT1 sing 211 n n C21 H212 HT1 sing 212 n n C22 N6 HT1 sing 213 n n C22 H221 HT1 sing 214 n n C22 H222 HT1 sing 215 n n N6 C23 HT1 sing 216 n n N6 C25 HT1 sing 217 n n C23 C24 HT1 sing 218 n n C23 H231 HT1 sing 219 n n C23 H232 HT1 sing 220 n n C24 H241 HT1 sing 221 n n C24 H242 HT1 sing 222 n n C25 H251 HT1 sing 223 n n C25 H252 HT1 sing 224 n n C25 H253 HT1 sing 225 n n C26 C27 HT1 sing 226 n n C26 H261 HT1 sing 227 n n C26 H262 HT1 sing 228 n n C27 H271 HT1 sing 229 n n C27 H272 HT1 sing 230 n n C27 H273 HT1 sing 231 n n # _atom_sites.entry_id 6T1Z _atom_sites.fract_transf_matrix[1][1] 0.009546 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007143 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008643 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HT1 A 1 501 1 HT1 HT1 . C 3 XP4 A 1 502 1 XP4 XP4 . D 3 XP4 A 1 503 2 XP4 XP4 . E 4 LMU A 1 504 1 LMU LMU . F 4 LMU A 1 505 2 LMU LMU . G 5 GOL A 1 506 1 GOL GOL . H 6 HOH A 1 601 2 HOH HOH . H 6 HOH A 2 602 3 HOH HOH . H 6 HOH A 3 603 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HT1 . . . B 2 -4.844 36.629 4.107 1 82.7 ? C1 HT1 501 A 1 HETATM 2 O O1 HT1 . . . B 2 -5.39 37.875 4.296 1 87.19 ? O1 HT1 501 A 1 HETATM 3 C C2 HT1 . . . B 2 -3.791 36.013 4.781 1 80.77 ? C2 HT1 501 A 1 HETATM 4 C C3 HT1 . . . B 2 -3.518 34.675 4.551 1 78.65 ? C3 HT1 501 A 1 HETATM 5 C C4 HT1 . . . B 2 -4.285 33.936 3.646 1 75.99 ? C4 HT1 501 A 1 HETATM 6 C C5 HT1 . . . B 2 -5.31 34.582 2.953 1 77.45 ? C5 HT1 501 A 1 HETATM 7 C C6 HT1 . . . B 2 -5.584 35.919 3.174 1 79.63 ? C6 HT1 501 A 1 HETATM 8 C C7 HT1 . . . B 2 -4.036 32.498 3.418 1 70.43 ? C7 HT1 501 A 1 HETATM 9 N N1 HT1 . . . B 2 -4.767 31.761 2.533 1 66.88 ? N1 HT1 501 A 1 HETATM 10 C C8 HT1 . . . B 2 -4.236 30.486 2.529 1 63.99 ? C8 HT1 501 A 1 HETATM 11 C C9 HT1 . . . B 2 -3.188 30.507 3.453 1 64.99 ? C9 HT1 501 A 1 HETATM 12 N N2 HT1 . . . B 2 -3.072 31.787 4.003 1 66.4 ? N2 HT1 501 A 1 HETATM 13 C C10 HT1 . . . B 2 -2.442 29.351 3.679 1 64.92 ? C10 HT1 501 A 1 HETATM 14 C C11 HT1 . . . B 2 -2.753 28.199 2.968 1 64.79 ? C11 HT1 501 A 1 HETATM 15 C C12 HT1 . . . B 2 -3.792 28.188 2.021 1 64.02 ? C12 HT1 501 A 1 HETATM 16 C C13 HT1 . . . B 2 -4.547 29.341 1.809 1 61.4 ? C13 HT1 501 A 1 HETATM 17 C C14 HT1 . . . B 2 -4.055 26.995 1.19 1 68.93 ? C14 HT1 501 A 1 HETATM 18 N N3 HT1 . . . B 2 -3.168 25.969 1.041 1 73.22 ? N3 HT1 501 A 1 HETATM 19 C C15 HT1 . . . B 2 -3.762 25.034 0.2 1 73.99 ? C15 HT1 501 A 1 HETATM 20 C C16 HT1 . . . B 2 -5.004 25.569 -0.133 1 72.67 ? C16 HT1 501 A 1 HETATM 21 N N4 HT1 . . . B 2 -5.17 26.803 0.496 1 70.57 ? N4 HT1 501 A 1 HETATM 22 C C17 HT1 . . . B 2 -5.879 24.841 -0.935 1 73.19 ? C17 HT1 501 A 1 HETATM 23 C C18 HT1 . . . B 2 -5.512 23.576 -1.365 1 74.67 ? C18 HT1 501 A 1 HETATM 24 C C19 HT1 . . . B 2 -4.269 23.014 -1.014 1 76 ? C19 HT1 501 A 1 HETATM 25 C C20 HT1 . . . B 2 -3.378 23.77 -0.238 1 74.62 ? C20 HT1 501 A 1 HETATM 26 N N5 HT1 . . . B 2 -3.957 21.696 -1.399 1 79.11 ? N5 HT1 501 A 1 HETATM 27 C C21 HT1 . . . B 2 -2.813 21.017 -0.78 1 79.44 ? C21 HT1 501 A 1 HETATM 28 C C22 HT1 . . . B 2 -2.918 19.513 -0.95 1 80.52 ? C22 HT1 501 A 1 HETATM 29 N N6 HT1 . . . B 2 -3.055 19.157 -2.36 1 82.56 ? N6 HT1 501 A 1 HETATM 30 C C23 HT1 . . . B 2 -4.266 19.769 -2.904 1 81.62 ? C23 HT1 501 A 1 HETATM 31 C C24 HT1 . . . B 2 -4.204 21.286 -2.789 1 80.96 ? C24 HT1 501 A 1 HETATM 32 C C25 HT1 . . . B 2 -3.092 17.713 -2.521 1 84.49 ? C25 HT1 501 A 1 HETATM 33 C C26 HT1 . . . B 2 -4.842 38.713 5.327 1 89.35 ? C26 HT1 501 A 1 HETATM 34 C C27 HT1 . . . B 2 -5.625 39.982 5.323 1 90.4 ? C27 HT1 501 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 559 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 34 #