data_6T2F
#
_model_server_result.job_id            y46PTJN3Gx-qVchkcTfjnQ 
_model_server_result.datetime_utc      '2025-07-04 00:37:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6t2f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    6T2F 
#
_exptl.entry_id    6T2F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              278.35 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            2-(methylamino)-~{N}-[[3-[[2-(methylamino)ethanoylamino]methyl]phenyl]methyl]ethanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6T2F 
_cell.length_a            40.497 
_cell.length_b            40.497 
_cell.length_c            103.098 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6T2F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B CG ASP 4 B ASP 4 1_555 C N4 M9H . B M9H 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.289 ? 
covale ? covale2 B CG ASP 11 B ASP 11 1_555 C N3 M9H . B M9H 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
#
_chem_comp.formula           'C14 H22 N4 O2' 
_chem_comp.formula_weight    278.35 
_chem_comp.id                M9H 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-(methylamino)-~{N}-[[3-[[2-(methylamino)ethanoylamino]methyl]phenyl]methyl]ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C7 M9H doub 218 n n 
C10 C11 M9H doub 219 n y 
C10 C5 M9H sing 220 n y 
N2 C7 M9H sing 221 n n 
N2 C6 M9H sing 222 n n 
C11 C12 M9H sing 223 n y 
C7 C8 M9H sing 224 n n 
C6 C5 M9H sing 225 n n 
C5 C4 M9H doub 226 n y 
C12 C3 M9H doub 227 n y 
N3 C8 M9H sing 228 n n 
N3 C9 M9H sing 229 n n 
C4 C3 M9H sing 230 n y 
C3 C2 M9H sing 231 n n 
C2 N1 M9H sing 232 n n 
C14 N4 M9H sing 233 n n 
N1 C1 M9H sing 234 n n 
N4 C13 M9H sing 235 n n 
C1 C13 M9H sing 236 n n 
C1 O1 M9H doub 237 n n 
N1 H1 M9H sing 238 n n 
C2 H2 M9H sing 239 n n 
C2 H3 M9H sing 240 n n 
C4 H4 M9H sing 241 n n 
C6 H5 M9H sing 242 n n 
C6 H6 M9H sing 243 n n 
N2 H7 M9H sing 244 n n 
C8 H8 M9H sing 245 n n 
C8 H9 M9H sing 246 n n 
N3 H10 M9H sing 247 n n 
C9 H12 M9H sing 248 n n 
C9 H13 M9H sing 249 n n 
C9 H14 M9H sing 250 n n 
C10 H15 M9H sing 251 n n 
C11 H16 M9H sing 252 n n 
C12 H17 M9H sing 253 n n 
C13 H18 M9H sing 254 n n 
C13 H19 M9H sing 255 n n 
N4 H20 M9H sing 256 n n 
C14 H22 M9H sing 257 n n 
C14 H23 M9H sing 258 n n 
C14 H24 M9H sing 259 n n 
#
_atom_sites.entry_id                     6T2F 
_atom_sites.fract_transf_matrix[1][1]    0.024693 
_atom_sites.fract_transf_matrix[1][2]    0.014257 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.028513 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0097 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 M9H B 1 201 201 M9H GAM . 
D 4 HOH A 1 201 3 HOH HOH . 
D 4 HOH A 2 202 37 HOH HOH . 
D 4 HOH A 3 203 1 HOH HOH . 
D 4 HOH A 4 204 55 HOH HOH . 
D 4 HOH A 5 205 5 HOH HOH . 
D 4 HOH A 6 206 9 HOH HOH . 
D 4 HOH A 7 207 28 HOH HOH . 
D 4 HOH A 8 208 42 HOH HOH . 
D 4 HOH A 9 209 34 HOH HOH . 
D 4 HOH A 10 210 20 HOH HOH . 
D 4 HOH A 11 211 61 HOH HOH . 
D 4 HOH A 12 212 31 HOH HOH . 
D 4 HOH A 13 213 26 HOH HOH . 
D 4 HOH A 14 214 30 HOH HOH . 
D 4 HOH A 15 215 23 HOH HOH . 
D 4 HOH A 16 216 63 HOH HOH . 
D 4 HOH A 17 217 64 HOH HOH . 
D 4 HOH A 18 218 18 HOH HOH . 
D 4 HOH A 19 219 33 HOH HOH . 
D 4 HOH A 20 220 11 HOH HOH . 
D 4 HOH A 21 221 40 HOH HOH . 
D 4 HOH A 22 222 10 HOH HOH . 
D 4 HOH A 23 223 2 HOH HOH . 
D 4 HOH A 24 224 57 HOH HOH . 
D 4 HOH A 25 225 21 HOH HOH . 
D 4 HOH A 26 226 36 HOH HOH . 
D 4 HOH A 27 227 29 HOH HOH . 
D 4 HOH A 28 228 32 HOH HOH . 
D 4 HOH A 29 229 17 HOH HOH . 
D 4 HOH A 30 230 8 HOH HOH . 
D 4 HOH A 31 231 41 HOH HOH . 
D 4 HOH A 32 232 13 HOH HOH . 
D 4 HOH A 33 233 6 HOH HOH . 
D 4 HOH A 34 234 35 HOH HOH . 
D 4 HOH A 35 235 44 HOH HOH . 
D 4 HOH A 36 236 25 HOH HOH . 
D 4 HOH A 37 237 62 HOH HOH . 
D 4 HOH A 38 238 58 HOH HOH . 
D 4 HOH A 39 239 54 HOH HOH . 
D 4 HOH A 40 240 56 HOH HOH . 
D 4 HOH A 41 241 7 HOH HOH . 
D 4 HOH A 42 242 43 HOH HOH . 
D 4 HOH A 43 243 53 HOH HOH . 
D 4 HOH A 44 244 59 HOH HOH . 
D 4 HOH A 45 245 19 HOH HOH . 
D 4 HOH A 46 246 22 HOH HOH . 
E 4 HOH B 1 301 47 HOH HOH . 
E 4 HOH B 2 302 39 HOH HOH . 
E 4 HOH B 3 303 38 HOH HOH . 
E 4 HOH B 4 304 16 HOH HOH . 
E 4 HOH B 5 305 27 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 M9H . . . C 3 -25.24 2.245 1.378 1 57.88 ? O1 M9H 201 B 1 
HETATM 2 C C1 M9H . . . C 3 -25.461 3.305 0.782 1 55.8 ? C1 M9H 201 B 1 
HETATM 3 N N1 M9H . . . C 3 -24.6 3.79 -0.123 1 56.2 ? N1 M9H 201 B 1 
HETATM 4 C C2 M9H . . . C 3 -23.422 3.053 -0.554 1 54.83 ? C2 M9H 201 B 1 
HETATM 5 C C3 M9H . . . C 3 -22.882 3.51 -1.885 1 56.44 ? C3 M9H 201 B 1 
HETATM 6 C C4 M9H . . . C 3 -21.561 3.924 -2.015 1 57.98 ? C4 M9H 201 B 1 
HETATM 7 C C5 M9H . . . C 3 -21.041 4.343 -3.234 1 61.53 ? C5 M9H 201 B 1 
HETATM 8 C C6 M9H . . . C 3 -19.592 4.755 -3.351 1 66.58 ? C6 M9H 201 B 1 
HETATM 9 N N2 M9H . . . C 3 -19.361 5.868 -4.28 1 68.86 ? N2 M9H 201 B 1 
HETATM 10 C C7 M9H . . . C 3 -19.304 7.143 -3.886 1 72.06 ? C7 M9H 201 B 1 
HETATM 11 C C8 M9H . . . C 3 -18.476 7.45 -2.651 1 70.26 ? C8 M9H 201 B 1 
HETATM 12 N N3 M9H . . . C 3 -17.044 7.487 -2.966 1 68.09 ? N3 M9H 201 B 1 
HETATM 13 C C9 M9H . . . C 3 -16.416 6.229 -2.522 1 61.44 ? C9 M9H 201 B 1 
HETATM 14 O O2 M9H . . . C 3 -19.896 8.052 -4.468 1 76.7 ? O2 M9H 201 B 1 
HETATM 15 C C10 M9H . . . C 3 -21.878 4.335 -4.348 1 63.34 ? C10 M9H 201 B 1 
HETATM 16 C C11 M9H . . . C 3 -23.198 3.929 -4.235 1 61.98 ? C11 M9H 201 B 1 
HETATM 17 C C12 M9H . . . C 3 -23.695 3.513 -3.011 1 58.94 ? C12 M9H 201 B 1 
HETATM 18 C C13 M9H . . . C 3 -26.744 4.087 1.06 1 52.7 ? C13 M9H 201 B 1 
HETATM 19 N N4 M9H . . . C 3 -26.918 5.443 0.502 1 48.64 ? N4 M9H 201 B 1 
HETATM 20 C C14 M9H . . . C 3 -28.003 5.556 -0.478 1 49.36 ? C14 M9H 201 B 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           395 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           20 
#