data_6T2L # _model_server_result.job_id tclR0Uy5b89p4VCkn0q4Dw _model_server_result.datetime_utc '2024-11-17 09:44:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t2l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 6T2L # _exptl.entry_id 6T2L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6T2L _cell.length_a 57.215 _cell.length_b 57.215 _cell.length_c 174.866 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T2L _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall 'I 4bw 2bw' _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 57.215 57.215 0 3 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 57.215 57.215 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 125 n n C1 C2 GOL sing 126 n n C1 H11 GOL sing 127 n n C1 H12 GOL sing 128 n n O1 HO1 GOL sing 129 n n C2 O2 GOL sing 130 n n C2 C3 GOL sing 131 n n C2 H2 GOL sing 132 n n O2 HO2 GOL sing 133 n n C3 O3 GOL sing 134 n n C3 H31 GOL sing 135 n n C3 H32 GOL sing 136 n n O3 HO3 GOL sing 137 n n # _atom_sites.entry_id 6T2L _atom_sites.fract_transf_matrix[1][1] 0.017478 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017478 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005719 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HL9 A 1 201 201 HL9 HL9 . C 3 EDO A 1 202 301 EDO EDO . D 4 GOL A 1 203 701 GOL GOL . E 5 HOH A 1 301 101 HOH HOH . E 5 HOH A 2 302 169 HOH HOH . E 5 HOH A 3 303 208 HOH HOH . E 5 HOH A 4 304 84 HOH HOH . E 5 HOH A 5 305 122 HOH HOH . E 5 HOH A 6 306 179 HOH HOH . E 5 HOH A 7 307 68 HOH HOH . E 5 HOH A 8 308 56 HOH HOH . E 5 HOH A 9 309 138 HOH HOH . E 5 HOH A 10 310 102 HOH HOH . E 5 HOH A 11 311 62 HOH HOH . E 5 HOH A 12 312 44 HOH HOH . E 5 HOH A 13 313 74 HOH HOH . E 5 HOH A 14 314 115 HOH HOH . E 5 HOH A 15 315 187 HOH HOH . E 5 HOH A 16 316 90 HOH HOH . E 5 HOH A 17 317 48 HOH HOH . E 5 HOH A 18 318 212 HOH HOH . E 5 HOH A 19 319 2 HOH HOH . E 5 HOH A 20 320 57 HOH HOH . E 5 HOH A 21 321 47 HOH HOH . E 5 HOH A 22 322 112 HOH HOH . E 5 HOH A 23 323 176 HOH HOH . E 5 HOH A 24 324 24 HOH HOH . E 5 HOH A 25 325 13 HOH HOH . E 5 HOH A 26 326 96 HOH HOH . E 5 HOH A 27 327 49 HOH HOH . E 5 HOH A 28 328 177 HOH HOH . E 5 HOH A 29 329 4 HOH HOH . E 5 HOH A 30 330 53 HOH HOH . E 5 HOH A 31 331 121 HOH HOH . E 5 HOH A 32 332 123 HOH HOH . E 5 HOH A 33 333 178 HOH HOH . E 5 HOH A 34 334 18 HOH HOH . E 5 HOH A 35 335 195 HOH HOH . E 5 HOH A 36 336 29 HOH HOH . E 5 HOH A 37 337 3 HOH HOH . E 5 HOH A 38 338 39 HOH HOH . E 5 HOH A 39 339 6 HOH HOH . E 5 HOH A 40 340 51 HOH HOH . E 5 HOH A 41 341 19 HOH HOH . E 5 HOH A 42 342 64 HOH HOH . E 5 HOH A 43 343 59 HOH HOH . E 5 HOH A 44 344 5 HOH HOH . E 5 HOH A 45 345 25 HOH HOH . E 5 HOH A 46 346 203 HOH HOH . E 5 HOH A 47 347 52 HOH HOH . E 5 HOH A 48 348 9 HOH HOH . E 5 HOH A 49 349 7 HOH HOH . E 5 HOH A 50 350 37 HOH HOH . E 5 HOH A 51 351 106 HOH HOH . E 5 HOH A 52 352 21 HOH HOH . E 5 HOH A 53 353 15 HOH HOH . E 5 HOH A 54 354 137 HOH HOH . E 5 HOH A 55 355 31 HOH HOH . E 5 HOH A 56 356 91 HOH HOH . E 5 HOH A 57 357 14 HOH HOH . E 5 HOH A 58 358 93 HOH HOH . E 5 HOH A 59 359 16 HOH HOH . E 5 HOH A 60 360 30 HOH HOH . E 5 HOH A 61 361 152 HOH HOH . E 5 HOH A 62 362 8 HOH HOH . E 5 HOH A 63 363 1 HOH HOH . E 5 HOH A 64 364 11 HOH HOH . E 5 HOH A 65 365 17 HOH HOH . E 5 HOH A 66 366 28 HOH HOH . E 5 HOH A 67 367 32 HOH HOH . E 5 HOH A 68 368 181 HOH HOH . E 5 HOH A 69 369 78 HOH HOH . E 5 HOH A 70 370 35 HOH HOH . E 5 HOH A 71 371 27 HOH HOH . E 5 HOH A 72 372 114 HOH HOH . E 5 HOH A 73 373 190 HOH HOH . E 5 HOH A 74 374 97 HOH HOH . E 5 HOH A 75 375 54 HOH HOH . E 5 HOH A 76 376 36 HOH HOH . E 5 HOH A 77 377 76 HOH HOH . E 5 HOH A 78 378 61 HOH HOH . E 5 HOH A 79 379 33 HOH HOH . E 5 HOH A 80 380 191 HOH HOH . E 5 HOH A 81 381 77 HOH HOH . E 5 HOH A 82 382 218 HOH HOH . E 5 HOH A 83 383 12 HOH HOH . E 5 HOH A 84 384 217 HOH HOH . E 5 HOH A 85 385 34 HOH HOH . E 5 HOH A 86 386 175 HOH HOH . E 5 HOH A 87 387 23 HOH HOH . E 5 HOH A 88 388 10 HOH HOH . E 5 HOH A 89 389 26 HOH HOH . E 5 HOH A 90 390 20 HOH HOH . E 5 HOH A 91 391 100 HOH HOH . E 5 HOH A 92 392 40 HOH HOH . E 5 HOH A 93 393 41 HOH HOH . E 5 HOH A 94 394 60 HOH HOH . E 5 HOH A 95 395 50 HOH HOH . E 5 HOH A 96 396 65 HOH HOH . E 5 HOH A 97 397 42 HOH HOH . E 5 HOH A 98 398 159 HOH HOH . E 5 HOH A 99 399 38 HOH HOH . E 5 HOH A 100 400 130 HOH HOH . E 5 HOH A 101 401 58 HOH HOH . E 5 HOH A 102 402 45 HOH HOH . E 5 HOH A 103 403 71 HOH HOH . E 5 HOH A 104 404 63 HOH HOH . E 5 HOH A 105 405 108 HOH HOH . E 5 HOH A 106 406 67 HOH HOH . E 5 HOH A 107 407 55 HOH HOH . E 5 HOH A 108 408 211 HOH HOH . E 5 HOH A 109 409 188 HOH HOH . E 5 HOH A 110 410 172 HOH HOH . E 5 HOH A 111 411 99 HOH HOH . E 5 HOH A 112 412 127 HOH HOH . E 5 HOH A 113 413 94 HOH HOH . E 5 HOH A 114 414 110 HOH HOH . E 5 HOH A 115 415 119 HOH HOH . E 5 HOH A 116 416 202 HOH HOH . E 5 HOH A 117 417 199 HOH HOH . E 5 HOH A 118 418 95 HOH HOH . E 5 HOH A 119 419 133 HOH HOH . E 5 HOH A 120 420 144 HOH HOH . E 5 HOH A 121 421 69 HOH HOH . E 5 HOH A 122 422 213 HOH HOH . E 5 HOH A 123 423 88 HOH HOH . E 5 HOH A 124 424 192 HOH HOH . E 5 HOH A 125 425 157 HOH HOH . E 5 HOH A 126 426 72 HOH HOH . E 5 HOH A 127 427 200 HOH HOH . E 5 HOH A 128 428 201 HOH HOH . E 5 HOH A 129 429 163 HOH HOH . E 5 HOH A 130 430 189 HOH HOH . E 5 HOH A 131 431 171 HOH HOH . E 5 HOH A 132 432 166 HOH HOH . E 5 HOH A 133 433 79 HOH HOH . E 5 HOH A 134 434 158 HOH HOH . E 5 HOH A 135 435 165 HOH HOH . E 5 HOH A 136 436 139 HOH HOH . E 5 HOH A 137 437 81 HOH HOH . E 5 HOH A 138 438 162 HOH HOH . E 5 HOH A 139 439 105 HOH HOH . E 5 HOH A 140 440 186 HOH HOH . E 5 HOH A 141 441 75 HOH HOH . E 5 HOH A 142 442 73 HOH HOH . E 5 HOH A 143 443 86 HOH HOH . E 5 HOH A 144 444 161 HOH HOH . E 5 HOH A 145 445 82 HOH HOH . E 5 HOH A 146 446 43 HOH HOH . E 5 HOH A 147 447 85 HOH HOH . E 5 HOH A 148 448 216 HOH HOH . E 5 HOH A 149 449 196 HOH HOH . E 5 HOH A 150 450 87 HOH HOH . E 5 HOH A 151 451 214 HOH HOH . E 5 HOH A 152 452 107 HOH HOH . E 5 HOH A 153 453 160 HOH HOH . E 5 HOH A 154 454 131 HOH HOH . E 5 HOH A 155 455 167 HOH HOH . E 5 HOH A 156 456 104 HOH HOH . E 5 HOH A 157 457 143 HOH HOH . E 5 HOH A 158 458 103 HOH HOH . E 5 HOH A 159 459 98 HOH HOH . E 5 HOH A 160 460 207 HOH HOH . E 5 HOH A 161 461 204 HOH HOH . E 5 HOH A 162 462 66 HOH HOH . E 5 HOH A 163 463 197 HOH HOH . E 5 HOH A 164 464 89 HOH HOH . E 5 HOH A 165 465 184 HOH HOH . E 5 HOH A 166 466 120 HOH HOH . E 5 HOH A 167 467 22 HOH HOH . E 5 HOH A 168 468 173 HOH HOH . E 5 HOH A 169 469 170 HOH HOH . E 5 HOH A 170 470 140 HOH HOH . E 5 HOH A 171 471 117 HOH HOH . E 5 HOH A 172 472 46 HOH HOH . E 5 HOH A 173 473 156 HOH HOH . E 5 HOH A 174 474 174 HOH HOH . E 5 HOH A 175 475 124 HOH HOH . E 5 HOH A 176 476 134 HOH HOH . E 5 HOH A 177 477 209 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 12.612 11.882 14.616 1 47.76 ? C1 GOL 203 A 1 HETATM 2 O O1 GOL . . . D 4 12.345 10.738 15.353 1 44.78 ? O1 GOL 203 A 1 HETATM 3 C C2 GOL . . . D 4 11.623 11.954 13.476 1 50.03 ? C2 GOL 203 A 1 HETATM 4 O O2 GOL . . . D 4 11.09 13.239 13.314 1 46.99 ? O2 GOL 203 A 1 HETATM 5 C C3 GOL . . . D 4 12.422 11.5 12.227 1 51.67 ? C3 GOL 203 A 1 HETATM 6 O O3 GOL . . . D 4 12.999 10.258 12.511 1 52.8 ? O3 GOL 203 A 1 HETATM 7 H H11 GOL . . . D 4 13.512 11.885 14.253 1 57.32 ? H11 GOL 203 A 1 HETATM 8 H H12 GOL . . . D 4 12.538 12.69 15.148 1 57.32 ? H12 GOL 203 A 1 HETATM 9 H H2 GOL . . . D 4 10.869 11.369 13.648 1 60.04 ? H2 GOL 203 A 1 HETATM 10 H HO2 GOL . . . D 4 10.296 13.238 13.622 1 56.39 ? HO2 GOL 203 A 1 HETATM 11 H H31 GOL . . . D 4 13.076 12.184 12.013 1 62 ? H31 GOL 203 A 1 HETATM 12 H H32 GOL . . . D 4 11.819 11.476 11.467 1 62 ? H32 GOL 203 A 1 HETATM 13 H HO3 GOL . . . D 4 13.466 10.044 11.837 1 63.36 ? HO3 GOL 203 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #