data_6T2P
#
_model_server_result.job_id            UsojZw0txVZDkGnfNTzpqA 
_model_server_result.datetime_utc      '2024-12-26 11:38:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6t2p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":303}' 
#
_entry.id    6T2P 
#
_exptl.entry_id    6T2P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6T2P 
_cell.length_a            82.724 
_cell.length_b            82.724 
_cell.length_c            121.682 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6T2P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,J 1 1 
B,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 47 AAA CYS 45 1_555 B SG CYS 47 BBB CYS 45 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? 
disulf ? disulf2 A SG CYS 109 AAA CYS 107 1_555 A SG CYS 230 AAA CYS 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
disulf ? disulf3 B SG CYS 109 BBB CYS 107 1_555 B SG CYS 230 BBB CYS 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc1 A O ASP 42 AAA ASP 40 1_555 F CA CA . AAA CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? 
metalc ? metalc2 A O GLY 83 AAA GLY 81 1_555 F CA CA . AAA CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc3 A O ASP 268 AAA ASP 266 1_555 F CA CA . AAA CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
metalc ? metalc4 A OD1 ASP 268 AAA ASP 266 1_555 F CA CA . AAA CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc5 F CA CA . AAA CA 304 1_555 J O HOH . AAA HOH 410 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? 
metalc ? metalc6 F CA CA . AAA CA 304 1_555 J O HOH . AAA HOH 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? 
metalc ? metalc7 B O ASP 42 BBB ASP 40 1_555 I CA CA . BBB CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? 
metalc ? metalc8 B O GLY 83 BBB GLY 81 1_555 I CA CA . BBB CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? 
metalc ? metalc9 B O ASP 268 BBB ASP 266 1_555 I CA CA . BBB CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc10 B OD1 ASP 268 BBB ASP 266 1_555 I CA CA . BBB CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc11 I CA CA . BBB CA 303 1_555 K O HOH . BBB HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc12 I CA CA . BBB CA 303 1_555 K O HOH . BBB HOH 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6T2P 
_atom_sites.fract_transf_matrix[1][1]    0.012088 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012088 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008218 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO AAA 1 301 301 EDO EDO . 
D 2 EDO AAA 1 302 401 EDO EDO . 
E 2 EDO AAA 1 303 501 EDO EDO . 
F 3 CA AAA 1 304 1 CA CA . 
G 2 EDO BBB 1 301 301 EDO EDO . 
H 2 EDO BBB 1 302 401 EDO EDO . 
I 3 CA BBB 1 303 2 CA CA . 
J 4 HOH AAA 1 401 136 HOH HOH . 
J 4 HOH AAA 2 402 132 HOH HOH . 
J 4 HOH AAA 3 403 106 HOH HOH . 
J 4 HOH AAA 4 404 69 HOH HOH . 
J 4 HOH AAA 5 405 137 HOH HOH . 
J 4 HOH AAA 6 406 32 HOH HOH . 
J 4 HOH AAA 7 407 78 HOH HOH . 
J 4 HOH AAA 8 408 55 HOH HOH . 
J 4 HOH AAA 9 409 7 HOH HOH . 
J 4 HOH AAA 10 410 113 HOH HOH . 
J 4 HOH AAA 11 411 25 HOH HOH . 
J 4 HOH AAA 12 412 15 HOH HOH . 
J 4 HOH AAA 13 413 51 HOH HOH . 
J 4 HOH AAA 14 414 34 HOH HOH . 
J 4 HOH AAA 15 415 26 HOH HOH . 
J 4 HOH AAA 16 416 42 HOH HOH . 
J 4 HOH AAA 17 417 114 HOH HOH . 
J 4 HOH AAA 18 418 96 HOH HOH . 
J 4 HOH AAA 19 419 115 HOH HOH . 
J 4 HOH AAA 20 420 44 HOH HOH . 
J 4 HOH AAA 21 421 57 HOH HOH . 
J 4 HOH AAA 22 422 65 HOH HOH . 
J 4 HOH AAA 23 423 17 HOH HOH . 
J 4 HOH AAA 24 424 35 HOH HOH . 
J 4 HOH AAA 25 425 61 HOH HOH . 
J 4 HOH AAA 26 426 64 HOH HOH . 
J 4 HOH AAA 27 427 50 HOH HOH . 
J 4 HOH AAA 28 428 97 HOH HOH . 
J 4 HOH AAA 29 429 37 HOH HOH . 
J 4 HOH AAA 30 430 79 HOH HOH . 
J 4 HOH AAA 31 431 71 HOH HOH . 
J 4 HOH AAA 32 432 109 HOH HOH . 
J 4 HOH AAA 33 433 22 HOH HOH . 
J 4 HOH AAA 34 434 40 HOH HOH . 
J 4 HOH AAA 35 435 76 HOH HOH . 
J 4 HOH AAA 36 436 12 HOH HOH . 
J 4 HOH AAA 37 437 11 HOH HOH . 
J 4 HOH AAA 38 438 59 HOH HOH . 
J 4 HOH AAA 39 439 100 HOH HOH . 
J 4 HOH AAA 40 440 124 HOH HOH . 
J 4 HOH AAA 41 441 83 HOH HOH . 
J 4 HOH AAA 42 442 121 HOH HOH . 
J 4 HOH AAA 43 443 46 HOH HOH . 
J 4 HOH AAA 44 444 48 HOH HOH . 
J 4 HOH AAA 45 445 27 HOH HOH . 
J 4 HOH AAA 46 446 19 HOH HOH . 
J 4 HOH AAA 47 447 102 HOH HOH . 
J 4 HOH AAA 48 448 112 HOH HOH . 
J 4 HOH AAA 49 449 18 HOH HOH . 
J 4 HOH AAA 50 450 128 HOH HOH . 
J 4 HOH AAA 51 451 24 HOH HOH . 
J 4 HOH AAA 52 452 111 HOH HOH . 
J 4 HOH AAA 53 453 85 HOH HOH . 
J 4 HOH AAA 54 454 33 HOH HOH . 
J 4 HOH AAA 55 455 94 HOH HOH . 
J 4 HOH AAA 56 456 73 HOH HOH . 
J 4 HOH AAA 57 457 75 HOH HOH . 
J 4 HOH AAA 58 458 29 HOH HOH . 
J 4 HOH AAA 59 459 6 HOH HOH . 
J 4 HOH AAA 60 460 88 HOH HOH . 
J 4 HOH AAA 61 461 133 HOH HOH . 
J 4 HOH AAA 62 462 5 HOH HOH . 
J 4 HOH AAA 63 463 72 HOH HOH . 
J 4 HOH AAA 64 464 3 HOH HOH . 
J 4 HOH AAA 65 465 98 HOH HOH . 
J 4 HOH AAA 66 466 52 HOH HOH . 
J 4 HOH AAA 67 467 62 HOH HOH . 
J 4 HOH AAA 68 468 123 HOH HOH . 
J 4 HOH AAA 69 469 117 HOH HOH . 
J 4 HOH AAA 70 470 131 HOH HOH . 
J 4 HOH AAA 71 471 67 HOH HOH . 
J 4 HOH AAA 72 472 60 HOH HOH . 
J 4 HOH AAA 73 473 68 HOH HOH . 
J 4 HOH AAA 74 474 80 HOH HOH . 
J 4 HOH AAA 75 475 99 HOH HOH . 
J 4 HOH AAA 76 476 20 HOH HOH . 
J 4 HOH AAA 77 477 4 HOH HOH . 
J 4 HOH AAA 78 478 93 HOH HOH . 
J 4 HOH AAA 79 479 116 HOH HOH . 
J 4 HOH AAA 80 480 141 HOH HOH . 
J 4 HOH AAA 81 481 126 HOH HOH . 
K 4 HOH BBB 1 401 122 HOH HOH . 
K 4 HOH BBB 2 402 139 HOH HOH . 
K 4 HOH BBB 3 403 118 HOH HOH . 
K 4 HOH BBB 4 404 105 HOH HOH . 
K 4 HOH BBB 5 405 41 HOH HOH . 
K 4 HOH BBB 6 406 107 HOH HOH . 
K 4 HOH BBB 7 407 91 HOH HOH . 
K 4 HOH BBB 8 408 82 HOH HOH . 
K 4 HOH BBB 9 409 84 HOH HOH . 
K 4 HOH BBB 10 410 53 HOH HOH . 
K 4 HOH BBB 11 411 110 HOH HOH . 
K 4 HOH BBB 12 412 74 HOH HOH . 
K 4 HOH BBB 13 413 14 HOH HOH . 
K 4 HOH BBB 14 414 66 HOH HOH . 
K 4 HOH BBB 15 415 134 HOH HOH . 
K 4 HOH BBB 16 416 54 HOH HOH . 
K 4 HOH BBB 17 417 125 HOH HOH . 
K 4 HOH BBB 18 418 130 HOH HOH . 
K 4 HOH BBB 19 419 63 HOH HOH . 
K 4 HOH BBB 20 420 87 HOH HOH . 
K 4 HOH BBB 21 421 10 HOH HOH . 
K 4 HOH BBB 22 422 2 HOH HOH . 
K 4 HOH BBB 23 423 81 HOH HOH . 
K 4 HOH BBB 24 424 142 HOH HOH . 
K 4 HOH BBB 25 425 36 HOH HOH . 
K 4 HOH BBB 26 426 89 HOH HOH . 
K 4 HOH BBB 27 427 43 HOH HOH . 
K 4 HOH BBB 28 428 77 HOH HOH . 
K 4 HOH BBB 29 429 104 HOH HOH . 
K 4 HOH BBB 30 430 16 HOH HOH . 
K 4 HOH BBB 31 431 45 HOH HOH . 
K 4 HOH BBB 32 432 21 HOH HOH . 
K 4 HOH BBB 33 433 56 HOH HOH . 
K 4 HOH BBB 34 434 8 HOH HOH . 
K 4 HOH BBB 35 435 129 HOH HOH . 
K 4 HOH BBB 36 436 39 HOH HOH . 
K 4 HOH BBB 37 437 58 HOH HOH . 
K 4 HOH BBB 38 438 140 HOH HOH . 
K 4 HOH BBB 39 439 101 HOH HOH . 
K 4 HOH BBB 40 440 47 HOH HOH . 
K 4 HOH BBB 41 441 108 HOH HOH . 
K 4 HOH BBB 42 442 13 HOH HOH . 
K 4 HOH BBB 43 443 31 HOH HOH . 
K 4 HOH BBB 44 444 103 HOH HOH . 
K 4 HOH BBB 45 445 30 HOH HOH . 
K 4 HOH BBB 46 446 138 HOH HOH . 
K 4 HOH BBB 47 447 127 HOH HOH . 
K 4 HOH BBB 48 448 135 HOH HOH . 
K 4 HOH BBB 49 449 28 HOH HOH . 
K 4 HOH BBB 50 450 86 HOH HOH . 
K 4 HOH BBB 51 451 38 HOH HOH . 
K 4 HOH BBB 52 452 95 HOH HOH . 
K 4 HOH BBB 53 453 70 HOH HOH . 
K 4 HOH BBB 54 454 9 HOH HOH . 
K 4 HOH BBB 55 455 90 HOH HOH . 
K 4 HOH BBB 56 456 23 HOH HOH . 
K 4 HOH BBB 57 457 49 HOH HOH . 
K 4 HOH BBB 58 458 120 HOH HOH . 
K 4 HOH BBB 59 459 119 HOH HOH . 
K 4 HOH BBB 60 460 143 HOH HOH . 
K 4 HOH BBB 61 461 92 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 2 -17.245 24.34 15.883 1 33.97 ? C1 EDO 303 AAA 1 
HETATM 2 O O1 EDO . . . E 2 -16.45 24.609 14.751 1 33.28 ? O1 EDO 303 AAA 1 
HETATM 3 C C2 EDO . . . E 2 -17.897 23.03 15.805 1 34.38 ? C2 EDO 303 AAA 1 
HETATM 4 O O2 EDO . . . E 2 -18.942 22.927 14.861 1 35.17 ? O2 EDO 303 AAA 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#